RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 PLSCR2Q9NRY7 297 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 IGKV1D-43A0A0B4J1Z2 117 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 TRBV7-9A0A0J9YWB2 115 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 CDK2AP2O75956 126 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 IGHG3P01860 377 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 EGR1P18146 543 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 OTX1P32242 354 aaPredicted RBP9.22□□□□□ -0.93
SHANK2-219ENST00000606715 STPG2Q8N412 459 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 KLHL30-AS1Q8NEE0 82 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 HLA-DQA1P01909 254 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 SPTBP11277 2137 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 ASPHD2Q6ICH7 369 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 KIR3DL3Q8N743 410 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 F11RQ9Y624 299 aaKnown RBP9.22□□□□□ -0.93
SHANK2-219ENST00000606715 TRGV11A0A075B6L2 103 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 PQLC2LA1A4F0 135 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 PRR32B1ATL7 298 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 NBEAP1P0C6P0 100 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 CXCL3P19876 107 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 CCL1P22362 96 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 NYNRINQ9P2P1 1898 aaKnown RBP9.22□□□□□ -0.93
SHANK2-219ENST00000606715 RRHO14718 337 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 FAM3BP58499 235 aaPredicted RBP9.22□□□□□ -0.93
SHANK2-219ENST00000606715 TMEM219Q86XT9 240 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 FOXC2Q99958 501 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 FBLN5Q9UBX5 448 aa9.22□□□□□ -0.93
SHANK2-219ENST00000606715 IGHV1-18A0A0C4DH31 117 aa9.21□□□□□ -0.93
SHANK2-219ENST00000606715 LEPROTL1O95214 131 aa9.21□□□□□ -0.93
SHANK2-219ENST00000606715 PSMG4Q5JS54 123 aa9.21□□□□□ -0.93
SHANK2-219ENST00000606715 ANK1P16157 1881 aa9.21□□□□□ -0.93
SHANK2-219ENST00000606715 PINLYPA6NC86 204 aa9.21□□□□□ -0.93
SHANK2-219ENST00000606715 H3BUX3 64 aa9.21□□□□□ -0.93
SHANK2-219ENST00000606715 CD8AP01732 235 aa9.21□□□□□ -0.93
SHANK2-219ENST00000606715 PAX8Q06710 450 aa9.21□□□□□ -0.93
SHANK2-219ENST00000606715 BEND2Q8NDZ0 799 aa9.21□□□□□ -0.93
SHANK2-219ENST00000606715 OR10AG1Q8NH19 301 aa9.21□□□□□ -0.93
SHANK2-219ENST00000606715 SMIM8Q96KF7 97 aa9.21□□□□□ -0.93
SHANK2-219ENST00000606715 PARD6GQ9BYG4 376 aaPredicted RBP9.21□□□□□ -0.93
SHANK2-219ENST00000606715 IGKV3D-20A0A0C4DH25 116 aa9.21□□□□□ -0.94
SHANK2-219ENST00000606715 TIMM23O14925 209 aa9.21□□□□□ -0.94
SHANK2-219ENST00000606715 LYPD3O95274 346 aa9.21□□□□□ -0.94
SHANK2-219ENST00000606715 RND3P61587 244 aa9.21□□□□□ -0.94
SHANK2-219ENST00000606715 MEF2BQ02080 365 aaPredicted RBP9.21□□□□□ -0.94
SHANK2-219ENST00000606715 BRD3OSQ6XYD6 125 aa9.21□□□□□ -0.94
SHANK2-219ENST00000606715 LCNL1Q6ZST4 164 aa9.21□□□□□ -0.94
SHANK2-219ENST00000606715 WBP1Q96G27 269 aa9.21□□□□□ -0.94
SHANK2-219ENST00000606715 MBD3L4A6NDZ8 208 aaPredicted RBP9.21□□□□□ -0.94
SHANK2-219ENST00000606715 MBD3L3A6NE82 208 aaPredicted RBP9.21□□□□□ -0.94
SHANK2-219ENST00000606715 MBD3L5A6NJ08 208 aaPredicted RBP9.21□□□□□ -0.94
SHANK2-219ENST00000606715 OR9G9P0C7N8 305 aa9.21□□□□□ -0.94
SHANK2-219ENST00000606715 MBD3L2Q8NHZ7 208 aaPredicted RBP9.21□□□□□ -0.94
SHANK2-219ENST00000606715 HIST1H2BAQ96A08 127 aa9.21□□□□□ -0.94
SHANK2-219ENST00000606715 Q96MF0 132 aa9.21□□□□□ -0.94
SHANK2-219ENST00000606715 SLC50A1Q9BRV3 221 aa9.21□□□□□ -0.94
SHANK2-219ENST00000606715 GVINP1Q7Z2Y8 2422 aa9.2□□□□□ -0.94
SHANK2-219ENST00000606715 PLXNA3P51805 1871 aa9.2□□□□□ -0.94
SHANK2-219ENST00000606715 P2RY4P51582 365 aa9.2□□□□□ -0.94
SHANK2-219ENST00000606715 GGNQ86UU5 652 aa9.2□□□□□ -0.94
SHANK2-219ENST00000606715 A0A1B0GTI1 187 aa9.2□□□□□ -0.94
SHANK2-219ENST00000606715 ZNF250P15622 560 aa9.2□□□□□ -0.94
SHANK2-219ENST00000606715 ZNF600Q6ZNG1 722 aa9.2□□□□□ -0.94
SHANK2-219ENST00000606715 C10orf126Q8N4M7 172 aa9.2□□□□□ -0.94
SHANK2-219ENST00000606715 LINC00862A6NCI5 91 aa9.2□□□□□ -0.94
SHANK2-219ENST00000606715 OR11H7Q8NGC8 314 aa9.2□□□□□ -0.94
SHANK2-219ENST00000606715 CYB561D1Q8N8Q1 229 aa9.2□□□□□ -0.94
SHANK2-219ENST00000606715 RNASEH2CQ8TDP1 164 aaKnown RBP9.2□□□□□ -0.94
SHANK2-219ENST00000606715 TNFRSF14Q92956 283 aa9.2□□□□□ -0.94
SHANK2-219ENST00000606715 F12P00748 615 aaPredicted RBP9.2□□□□□ -0.94
SHANK2-219ENST00000606715 HOXA5P20719 270 aa9.2□□□□□ -0.94
SHANK2-219ENST00000606715 CA7P43166 264 aa9.2□□□□□ -0.94
SHANK2-219ENST00000606715 FAM110DQ8TAY7 271 aaPredicted RBP9.2□□□□□ -0.94
SHANK2-219ENST00000606715 RP1P56715 2156 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 ZNF318Q5VUA4 2279 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 ATP5LO75964 103 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 LRTM2Q8N967 370 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 GCHFRP30047 84 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 C1QL2Q7Z5L3 287 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 SCGB3A1Q96QR1 104 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 OR5AC2Q9NZP5 309 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 COL4A6Q14031 1691 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 VWA8A3KMH1 1905 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 FOXF2Q12947 444 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 TMEM136Q6ZRR5 245 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 FAM169BQ8N8A8 192 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 OR52E5Q8NH55 327 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 ZNF837Q96EG3 531 aaPredicted RBP9.19□□□□□ -0.94
SHANK2-219ENST00000606715 GRIFINA4D1Z8 144 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 ADARB2-AS1A8MUL3 147 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 IGHV1-46P01743 117 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 TEX38Q6PEX7 206 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 PIP4P1Q86T03 277 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 WFDC12Q8WWY7 111 aa9.19□□□□□ -0.94
SHANK2-219ENST00000606715 C1QTNF9BB2RNN3 333 aa9.18□□□□□ -0.94
SHANK2-219ENST00000606715 C1QTNF9P0C862 333 aa9.18□□□□□ -0.94
SHANK2-219ENST00000606715 GGACTQ9BVM4 153 aa9.18□□□□□ -0.94
SHANK2-219ENST00000606715 TMEM160Q9NX00 188 aa9.18□□□□□ -0.94
SHANK2-219ENST00000606715 OR11H12B2RN74 326 aa9.18□□□□□ -0.94
SHANK2-219ENST00000606715 PEX7O00628 323 aa9.18□□□□□ -0.94
SHANK2-219ENST00000606715 CD5P06127 495 aa9.18□□□□□ -0.94
SHANK2-219ENST00000606715 SAA1P0DJI8 122 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms