RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 OR1L6Q8NGR2 347 aa14.86□□□□□ -0.03
SHKBP1-221ENST00000599833 THYN1Q9P016 225 aa14.86□□□□□ -0.03
SHKBP1-221ENST00000599833 HSPB7Q9UBY9 170 aa14.86□□□□□ -0.03
SHKBP1-221ENST00000599833 HUWE1Q7Z6Z7 4374 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-221ENST00000599833 IGHV3-21A0A0B4J1V1 117 aa14.85□□□□□ -0.03
SHKBP1-221ENST00000599833 WI2-2373I1.2A0A1W2PRP0 233 aa14.85□□□□□ -0.03
SHKBP1-221ENST00000599833 TCRBP04435 133 aa14.85□□□□□ -0.03
SHKBP1-221ENST00000599833 CSN3P07498 182 aa14.85□□□□□ -0.03
SHKBP1-221ENST00000599833 EDN2P20800 178 aa14.85□□□□□ -0.03
SHKBP1-221ENST00000599833 INSL3P51460 131 aa14.85□□□□□ -0.03
SHKBP1-221ENST00000599833 SMCO1Q147U7 214 aa14.85□□□□□ -0.03
SHKBP1-221ENST00000599833 RPEL1Q2QD12 228 aa14.85□□□□□ -0.03
SHKBP1-221ENST00000599833 OR9G4Q8NGQ1 327 aa14.85□□□□□ -0.03
SHKBP1-221ENST00000599833 ATP6V0BQ99437 205 aa14.85□□□□□ -0.03
SHKBP1-221ENST00000599833 A0A1B0GU03 582 aa14.84□□□□□ -0.03
SHKBP1-221ENST00000599833 K7EIL1 84 aa14.84□□□□□ -0.03
SHKBP1-221ENST00000599833 GGCTO75223 188 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-221ENST00000599833 NXPH3O95157 252 aa14.84□□□□□ -0.03
SHKBP1-221ENST00000599833 OR2C1O95371 312 aa14.84□□□□□ -0.03
SHKBP1-221ENST00000599833 GPR183P32249 361 aa14.84□□□□□ -0.03
SHKBP1-221ENST00000599833 ADMP35318 185 aa14.84□□□□□ -0.03
SHKBP1-221ENST00000599833 ARL3P36405 182 aa14.84□□□□□ -0.03
SHKBP1-221ENST00000599833 ERHP84090 104 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-221ENST00000599833 TNFRSF9Q07011 255 aa14.84□□□□□ -0.03
SHKBP1-221ENST00000599833 LYG2Q86SG7 212 aa14.84□□□□□ -0.03
SHKBP1-221ENST00000599833 GPHB5Q86YW7 130 aa14.84□□□□□ -0.03
SHKBP1-221ENST00000599833 MPTX1A8MV57 137 aa14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 LGALS9O00182 355 aa14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 MT-CO2P00403 227 aa14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 SLC25A6P12236 298 aa14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 FCGR2BP31994 310 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 HOXA1P49639 335 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 REC114Q7Z4M0 266 aa14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 HAPLN4Q86UW8 402 aa14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 OR52B4Q8NGK2 314 aa14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 CHRDL1Q9BU40 450 aa14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 PDCD10Q9BUL8 212 aa14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 ZNF436Q9C0F3 470 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 FNDC4Q9H6D8 234 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 ZC4H2Q9NQZ6 224 aa14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 C21orf62Q9NYP8 219 aa14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 SIGLEC8Q9NYZ4 499 aa14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 MRPL36Q9P0J6 103 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-221ENST00000599833 CYB5BO43169 146 aa14.82□□□□□ -0.04
SHKBP1-221ENST00000599833 TGOLN2O43493 480 aa14.82□□□□□ -0.04
SHKBP1-221ENST00000599833 SAP30O75446 220 aa14.82□□□□□ -0.04
SHKBP1-221ENST00000599833 ADAP1O75689 374 aa14.82□□□□□ -0.04
SHKBP1-221ENST00000599833 IGLV1-51P01701 117 aa14.82□□□□□ -0.04
SHKBP1-221ENST00000599833 GGNBP1Q5YKI7 109 aa14.82□□□□□ -0.04
SHKBP1-221ENST00000599833 UNQ9165/PRO28630Q6UXU0 137 aa14.82□□□□□ -0.04
SHKBP1-221ENST00000599833 MISP3Q96FF7 219 aa14.82□□□□□ -0.04
SHKBP1-221ENST00000599833 TMED3Q9Y3Q3 217 aa14.82□□□□□ -0.04
SHKBP1-221ENST00000599833 A8MWP6 167 aa14.81□□□□□ -0.04
SHKBP1-221ENST00000599833 IGHV3-48P01763 117 aa14.81□□□□□ -0.04
SHKBP1-221ENST00000599833 CTSGP08311 255 aa14.81□□□□□ -0.04
SHKBP1-221ENST00000599833 HOXB5P09067 269 aa14.81□□□□□ -0.04
SHKBP1-221ENST00000599833 MLANAQ16655 118 aa14.81□□□□□ -0.04
SHKBP1-221ENST00000599833 MITD1Q8WV92 249 aa14.81□□□□□ -0.04
SHKBP1-221ENST00000599833 RBKSQ9H477 322 aa14.81□□□□□ -0.04
SHKBP1-221ENST00000599833 NUDT15Q9NV35 164 aa14.81□□□□□ -0.04
SHKBP1-221ENST00000599833 TRAV6A0A075B6T7 132 aa14.8□□□□□ -0.04
SHKBP1-221ENST00000599833 TMEM213A2RRL7 107 aa14.8□□□□□ -0.04
SHKBP1-221ENST00000599833 OR2T8A6NH00 312 aa14.8□□□□□ -0.04
SHKBP1-221ENST00000599833 C2orf83Q53S99 150 aa14.8□□□□□ -0.04
SHKBP1-221ENST00000599833 BSCL2Q96G97 398 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-221ENST00000599833 PIGBOS1A0A0B4J2F0 54 aa14.79□□□□□ -0.04
SHKBP1-221ENST00000599833 C2orf70A6NJV1 201 aa14.79□□□□□ -0.04
SHKBP1-221ENST00000599833 SNCAP37840 140 aa14.79□□□□□ -0.04
SHKBP1-221ENST00000599833 SPNP16150 400 aa14.78□□□□□ -0.04
SHKBP1-221ENST00000599833 HTR2BP41595 481 aa14.78□□□□□ -0.04
SHKBP1-221ENST00000599833 C4orf46Q504U0 113 aa14.78□□□□□ -0.04
SHKBP1-221ENST00000599833 SPSB3Q6PJ21 355 aa14.78□□□□□ -0.04
SHKBP1-221ENST00000599833 DUSP18Q8NEJ0 188 aa14.78□□□□□ -0.04
SHKBP1-221ENST00000599833 SLC24A4Q8NFF2 622 aa14.78□□□□□ -0.04
SHKBP1-221ENST00000599833 TXN2Q99757 166 aa14.78□□□□□ -0.04
SHKBP1-221ENST00000599833 ELOVL1Q9BW60 279 aa14.78□□□□□ -0.04
SHKBP1-221ENST00000599833 HEYLQ9NQ87 328 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-221ENST00000599833 CACFD1Q9UGQ2 172 aa14.78□□□□□ -0.04
SHKBP1-221ENST00000599833 IGHV3-35A0A0C4DH35 117 aa14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 FAM240BA0A1B0GVZ2 78 aa14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 CEBPZOSA8MTT3 80 aa14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 FAM90A26D6RGX4 464 aa14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 H2AFB2P0C5Z0 115 aa14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 MFAP4P55083 255 aa14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 PLET1Q6UQ28 207 aa14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 OR4D5Q8NGN0 318 aa14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 OR1S1Q8NH92 325 aa14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 COQ8AQ8NI60 647 aa14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 DTD1Q8TEA8 209 aa14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 TMEM190Q8WZ59 177 aa14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 PINX1Q96BK5 328 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 OR4C12Q96R67 309 aa14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 PRR25Q96S07 402 aa14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 SEC22CQ9BRL7 303 aa14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 ENY2Q9NPA8 101 aa14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 ZNF256Q9Y2P7 627 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-221ENST00000599833 DNAH7Q8WXX0 4024 aa14.76□□□□□ -0.05
SHKBP1-221ENST00000599833 IZUMO1RA6ND01 250 aa14.76□□□□□ -0.05
SHKBP1-221ENST00000599833 CORTO00230 105 aa14.76□□□□□ -0.05
SHKBP1-221ENST00000599833 C8orf88P0DMB2 117 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms