RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 CRLF1O75462 422 aa12.17□□□□□ -0.46
UPF1-206ENST00000598471 HIST1H1BP16401 226 aaKnown RBP12.17□□□□□ -0.46
UPF1-206ENST00000598471 DLK1P80370 383 aa12.17□□□□□ -0.46
UPF1-206ENST00000598471 EXOSC2Q13868 293 aaKnown RBP12.17□□□□□ -0.46
UPF1-206ENST00000598471 ASPHD1Q5U4P2 390 aa12.17□□□□□ -0.46
UPF1-206ENST00000598471 ETFRF1Q6IPR1 90 aa12.17□□□□□ -0.46
UPF1-206ENST00000598471 SLC25A24Q6NUK1 477 aa12.17□□□□□ -0.46
UPF1-206ENST00000598471 SLC51BQ86UW2 128 aa12.17□□□□□ -0.46
UPF1-206ENST00000598471 TMEM170AQ8WVE7 144 aa12.17□□□□□ -0.46
UPF1-206ENST00000598471 TMEM147Q9BVK8 224 aa12.17□□□□□ -0.46
UPF1-206ENST00000598471 ZNF471Q9BX82 626 aaPredicted RBP12.17□□□□□ -0.46
UPF1-206ENST00000598471 WNT10AQ9GZT5 417 aa12.17□□□□□ -0.46
UPF1-206ENST00000598471 BOLA1Q9Y3E2 137 aa12.17□□□□□ -0.46
UPF1-206ENST00000598471 SVEP1Q4LDE5 3571 aa12.17□□□□□ -0.46
UPF1-206ENST00000598471 FN1P02751 2386 aaKnown RBP12.16□□□□□ -0.46
UPF1-206ENST00000598471 JTBO76095 146 aa12.16□□□□□ -0.46
UPF1-206ENST00000598471 IFNA5P01569 189 aa12.16□□□□□ -0.46
UPF1-206ENST00000598471 CRYBA1P05813 215 aa12.16□□□□□ -0.46
UPF1-206ENST00000598471 RNASE1P07998 156 aaKnown RBP12.16□□□□□ -0.46
UPF1-206ENST00000598471 ARL16Q0P5N6 197 aa12.16□□□□□ -0.46
UPF1-206ENST00000598471 PVRIGQ6DKI7 326 aa12.16□□□□□ -0.46
UPF1-206ENST00000598471 HAPLN4Q86UW8 402 aa12.16□□□□□ -0.46
UPF1-206ENST00000598471 MISP3Q96FF7 219 aa12.16□□□□□ -0.46
UPF1-206ENST00000598471 BSCL2Q96G97 398 aaPredicted RBP12.16□□□□□ -0.46
UPF1-206ENST00000598471 GON7Q9BXV9 100 aa12.16□□□□□ -0.46
UPF1-206ENST00000598471 ESM1Q9NQ30 184 aa12.16□□□□□ -0.46
UPF1-206ENST00000598471 UQCC1Q9NVA1 299 aa12.16□□□□□ -0.46
UPF1-206ENST00000598471 THYN1Q9P016 225 aa12.16□□□□□ -0.46
UPF1-206ENST00000598471 LINC01548A6NM66 108 aa12.15□□□□□ -0.46
UPF1-206ENST00000598471 FNDC10F2Z333 226 aa12.15□□□□□ -0.46
UPF1-206ENST00000598471 GPX4P36969 197 aaPredicted RBP12.15□□□□□ -0.46
UPF1-206ENST00000598471 OPRK1P41145 380 aa12.15□□□□□ -0.46
UPF1-206ENST00000598471 UBA52P62987 128 aaKnown RBP12.15□□□□□ -0.46
UPF1-206ENST00000598471 OR5T1Q8NG75 326 aa12.15□□□□□ -0.46
UPF1-206ENST00000598471 CACNG8Q8WXS5 425 aa12.15□□□□□ -0.46
UPF1-206ENST00000598471 SLC35E1Q96K37 410 aa12.15□□□□□ -0.46
UPF1-206ENST00000598471 ZNF702PQ9H963 129 aa12.15□□□□□ -0.46
UPF1-206ENST00000598471 SMCO3A2RU48 225 aa12.14□□□□□ -0.47
UPF1-206ENST00000598471 FAM181BA6NEQ2 426 aa12.14□□□□□ -0.47
UPF1-206ENST00000598471 PRSS46E5RG02 174 aa12.14□□□□□ -0.47
UPF1-206ENST00000598471 G3V318 75 aa12.14□□□□□ -0.47
UPF1-206ENST00000598471 TCF21O43680 179 aa12.14□□□□□ -0.47
UPF1-206ENST00000598471 TPT1P13693 172 aaKnown RBP12.14□□□□□ -0.47
UPF1-206ENST00000598471 CD69Q07108 199 aa12.14□□□□□ -0.47
UPF1-206ENST00000598471 SLC16A13Q7RTY0 426 aa12.14□□□□□ -0.47
UPF1-206ENST00000598471 SCGB1C1Q8TD33 95 aa12.14□□□□□ -0.47
UPF1-206ENST00000598471 ZNF355PQ9NSJ1 428 aa12.14□□□□□ -0.47
UPF1-206ENST00000598471 PLXNB1O43157 2135 aa12.14□□□□□ -0.47
UPF1-206ENST00000598471 MTORP42345 2549 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 IGLV11-55A0A075B6I3 123 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 UBE2L5PA0A1B0GUS4 154 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 H3BUA1 57 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 MFAP2P55001 183 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 SLC35B1P78383 322 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 AKR1C1Q04828 323 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 C19orf54Q5BKX5 351 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 RPL7L1Q6DKI1 246 aaKnown RBP12.13□□□□□ -0.47
UPF1-206ENST00000598471 Q6ZS46 218 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 C19orf35Q6ZS72 473 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 Q8N2B8 174 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 UBAC2Q8NBM4 344 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 OR2T6Q8NHC8 308 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 STOML3Q8TAV4 291 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 WFDC1Q9HC57 220 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 CYTL1Q9NRR1 136 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 LINC00527Q9UJ94 153 aa12.13□□□□□ -0.47
UPF1-206ENST00000598471 MT-CO2P00403 227 aa12.12□□□□□ -0.47
UPF1-206ENST00000598471 VWC2Q2TAL6 325 aa12.12□□□□□ -0.47
UPF1-206ENST00000598471 NOL4LQ96MY1 436 aaPredicted RBP12.12□□□□□ -0.47
UPF1-206ENST00000598471 PARD6GQ9BYG4 376 aaPredicted RBP12.12□□□□□ -0.47
UPF1-206ENST00000598471 NPVFQ9HCQ7 196 aa12.12□□□□□ -0.47
UPF1-206ENST00000598471 MXRA5Q9NR99 2828 aa12.12□□□□□ -0.47
UPF1-206ENST00000598471 OR2J3O76001 311 aa12.11□□□□□ -0.47
UPF1-206ENST00000598471 BRI3O95415 125 aa12.11□□□□□ -0.47
UPF1-206ENST00000598471 PRH1P02810 166 aa12.11□□□□□ -0.47
UPF1-206ENST00000598471 RAB31Q13636 194 aa12.11□□□□□ -0.47
UPF1-206ENST00000598471 KLK9Q2XQG4 91 aa12.11□□□□□ -0.47
UPF1-206ENST00000598471 EIF5AL1Q6IS14 154 aaKnown RBP12.11□□□□□ -0.47
UPF1-206ENST00000598471 BAP18Q8IXM2 172 aa12.11□□□□□ -0.47
UPF1-206ENST00000598471 ST8SIA2Q92186 375 aa12.11□□□□□ -0.47
UPF1-206ENST00000598471 FANCD2OSQ96PS1 177 aa12.11□□□□□ -0.47
UPF1-206ENST00000598471 SLA2Q9H6Q3 261 aa12.11□□□□□ -0.47
UPF1-206ENST00000598471 KLK9Q9UKQ9 250 aa12.11□□□□□ -0.47
UPF1-206ENST00000598471 DMRT1Q9Y5R6 373 aa12.11□□□□□ -0.47
UPF1-206ENST00000598471 ZFHX3Q15911 3703 aa12.1□□□□□ -0.47
UPF1-206ENST00000598471 TMEM89A2RUT3 159 aa12.1□□□□□ -0.47
UPF1-206ENST00000598471 I3L2K1 104 aa12.1□□□□□ -0.47
UPF1-206ENST00000598471 MPDU1O75352 247 aa12.1□□□□□ -0.47
UPF1-206ENST00000598471 FGF7P21781 194 aa12.1□□□□□ -0.47
UPF1-206ENST00000598471 PPIFP30405 207 aaKnown RBP12.1□□□□□ -0.47
UPF1-206ENST00000598471 TMEM95Q3KNT9 176 aa12.1□□□□□ -0.47
UPF1-206ENST00000598471 ACSM6Q6P461 480 aa12.1□□□□□ -0.47
UPF1-206ENST00000598471 NECAP1Q8NC96 275 aa12.1□□□□□ -0.47
UPF1-206ENST00000598471 GNPNAT1Q96EK6 184 aaPredicted RBP12.1□□□□□ -0.47
UPF1-206ENST00000598471 ACY3Q96HD9 319 aa12.1□□□□□ -0.47
UPF1-206ENST00000598471 WDR61Q9GZS3 305 aaKnown RBP12.1□□□□□ -0.47
UPF1-206ENST00000598471 FNDC4Q9H6D8 234 aaPredicted RBP12.1□□□□□ -0.47
UPF1-206ENST00000598471 FBXL7Q9UJT9 491 aa12.1□□□□□ -0.47
UPF1-206ENST00000598471 WDR83OSQ9Y284 106 aa12.1□□□□□ -0.47
UPF1-206ENST00000598471 PSMB11A5LHX3 300 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms