RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CD69Q07108 199 aa16.43■□□□□ 0.22
PNKP-203ENST00000593946 ASPHD1Q5U4P2 390 aa16.43■□□□□ 0.22
PNKP-203ENST00000593946 TREML4Q6UXN2 200 aa16.43■□□□□ 0.22
PNKP-203ENST00000593946 C19orf35Q6ZS72 473 aa16.43■□□□□ 0.22
PNKP-203ENST00000593946 C16orf82Q7Z2V1 217 aa16.43■□□□□ 0.22
PNKP-203ENST00000593946 PSMG3Q9BT73 122 aaPredicted RBP16.43■□□□□ 0.22
PNKP-203ENST00000593946 IGHV4-59P01825 116 aa16.42■□□□□ 0.22
PNKP-203ENST00000593946 OR2G3Q8NGZ4 309 aa16.42■□□□□ 0.22
PNKP-203ENST00000593946 CACNG8Q8WXS5 425 aa16.42■□□□□ 0.22
PNKP-203ENST00000593946 PRDM13Q9H4Q3 707 aa16.42■□□□□ 0.22
PNKP-203ENST00000593946 NPVFQ9HCQ7 196 aa16.42■□□□□ 0.22
PNKP-203ENST00000593946 FLNBO75369 2602 aaKnown RBP16.42■□□□□ 0.22
PNKP-203ENST00000593946 SMCO3A2RU48 225 aa16.42■□□□□ 0.22
PNKP-203ENST00000593946 M0QZK8 103 aa16.42■□□□□ 0.22
PNKP-203ENST00000593946 CRYGCP07315 174 aa16.42■□□□□ 0.22
PNKP-203ENST00000593946 GPX4P36969 197 aaPredicted RBP16.42■□□□□ 0.22
PNKP-203ENST00000593946 CENPVQ7Z7K6 275 aaPredicted RBP16.42■□□□□ 0.22
PNKP-203ENST00000593946 LRRC20Q8TCA0 184 aa16.42■□□□□ 0.22
PNKP-203ENST00000593946 ZNF48Q96MX3 618 aaPredicted RBP16.42■□□□□ 0.22
PNKP-203ENST00000593946 FNDC4Q9H6D8 234 aaPredicted RBP16.42■□□□□ 0.22
PNKP-203ENST00000593946 DMRT1Q9Y5R6 373 aa16.42■□□□□ 0.22
PNKP-203ENST00000593946 NPIPB5A8MRT5 1133 aa16.41■□□□□ 0.22
PNKP-203ENST00000593946 MPDU1O75352 247 aa16.41■□□□□ 0.22
PNKP-203ENST00000593946 BTNL8Q6UX41 500 aa16.41■□□□□ 0.22
PNKP-203ENST00000593946 Q6YL49 198 aa16.41■□□□□ 0.22
PNKP-203ENST00000593946 OR5R1Q8NH85 324 aa16.41■□□□□ 0.22
PNKP-203ENST00000593946 SGMS2Q8NHU3 365 aa16.41■□□□□ 0.22
PNKP-203ENST00000593946 NPCDR1Q9BY65 106 aa16.41■□□□□ 0.22
PNKP-203ENST00000593946 WNT10AQ9GZT5 417 aa16.41■□□□□ 0.22
PNKP-203ENST00000593946 LSM4Q9Y4Z0 139 aaKnown RBP16.41■□□□□ 0.22
PNKP-203ENST00000593946 TIMM9Q9Y5J7 89 aa16.41■□□□□ 0.22
PNKP-203ENST00000593946 SH2D7A6NKC9 451 aaPredicted RBP16.4■□□□□ 0.22
PNKP-203ENST00000593946 CORTO00230 105 aa16.4■□□□□ 0.22
PNKP-203ENST00000593946 GAMTQ14353 236 aa16.4■□□□□ 0.22
PNKP-203ENST00000593946 MLANAQ16655 118 aa16.4■□□□□ 0.22
PNKP-203ENST00000593946 TMEM182Q6ZP80 229 aaPredicted RBP16.4■□□□□ 0.22
PNKP-203ENST00000593946 SLC16A13Q7RTY0 426 aa16.4■□□□□ 0.22
PNKP-203ENST00000593946 TTC9CQ8N5M4 171 aa16.4■□□□□ 0.22
PNKP-203ENST00000593946 LFNGQ8NES3 379 aa16.4■□□□□ 0.22
PNKP-203ENST00000593946 ATP6V0E1O15342 81 aa16.39■□□□□ 0.21
PNKP-203ENST00000593946 OPRK1P41145 380 aa16.39■□□□□ 0.21
PNKP-203ENST00000593946 SPNS3Q6ZMD2 512 aa16.39■□□□□ 0.21
PNKP-203ENST00000593946 IL17RELQ6ZVW7 336 aa16.39■□□□□ 0.21
PNKP-203ENST00000593946 PARP11Q9NR21 331 aa16.39■□□□□ 0.21
PNKP-203ENST00000593946 UMAD1C9J7I0 102 aa16.39■□□□□ 0.21
PNKP-203ENST00000593946 RAB5CP51148 216 aa16.39■□□□□ 0.21
PNKP-203ENST00000593946 SERF2P84101 59 aa16.39■□□□□ 0.21
PNKP-203ENST00000593946 AKR1C1Q04828 323 aa16.39■□□□□ 0.21
PNKP-203ENST00000593946 TMEM144Q7Z5S9 345 aa16.39■□□□□ 0.21
PNKP-203ENST00000593946 OR1L6Q8NGR2 347 aa16.39■□□□□ 0.21
PNKP-203ENST00000593946 MISP3Q96FF7 219 aa16.39■□□□□ 0.21
PNKP-203ENST00000593946 LINC01548A6NM66 108 aa16.38■□□□□ 0.21
PNKP-203ENST00000593946 ZNF705EA8MWA4 302 aaPredicted RBP16.38■□□□□ 0.21
PNKP-203ENST00000593946 DEFA4P12838 97 aa16.38■□□□□ 0.21
PNKP-203ENST00000593946 TEPPQ6URK8 271 aa16.38■□□□□ 0.21
PNKP-203ENST00000593946 SAT2Q96F10 170 aaPredicted RBP16.38■□□□□ 0.21
PNKP-203ENST00000593946 MGST2Q99735 147 aa16.38■□□□□ 0.21
PNKP-203ENST00000593946 YAE1D1Q9NRH1 226 aa16.38■□□□□ 0.21
PNKP-203ENST00000593946 TRIM77I1YAP6 450 aa16.37■□□□□ 0.21
PNKP-203ENST00000593946 ETFRF1Q6IPR1 90 aa16.37■□□□□ 0.21
PNKP-203ENST00000593946 SLC35E1Q96K37 410 aa16.37■□□□□ 0.21
PNKP-203ENST00000593946 CXorf58Q96LI9 332 aa16.37■□□□□ 0.21
PNKP-203ENST00000593946 LINC00862A6NCI5 91 aa16.36■□□□□ 0.21
PNKP-203ENST00000593946 BTBD17A6NE02 478 aa16.36■□□□□ 0.21
PNKP-203ENST00000593946 CRIP2P52943 208 aaPredicted RBP16.36■□□□□ 0.21
PNKP-203ENST00000593946 SLC7A5P1Q8MH63 180 aa16.36■□□□□ 0.21
PNKP-203ENST00000593946 ZNF709Q8N972 641 aa16.36■□□□□ 0.21
PNKP-203ENST00000593946 OR2T6Q8NHC8 308 aa16.36■□□□□ 0.21
PNKP-203ENST00000593946 VPREB3Q9UKI3 123 aa16.36■□□□□ 0.21
PNKP-203ENST00000593946 IGKV1OR2-108A0A075B7D4 117 aa16.36■□□□□ 0.21
PNKP-203ENST00000593946 C17orf112F2Z3M2 114 aa16.36■□□□□ 0.21
PNKP-203ENST00000593946 AKIRIN2Q53H80 203 aa16.36■□□□□ 0.21
PNKP-203ENST00000593946 AKR1C8PQ5T2L2 129 aa16.36■□□□□ 0.21
PNKP-203ENST00000593946 TMEM68Q96MH6 324 aa16.36■□□□□ 0.21
PNKP-203ENST00000593946 GGTLC1Q9BX51 225 aa16.36■□□□□ 0.21
PNKP-203ENST00000593946 BAHCC1Q9P281 2608 aa16.35■□□□□ 0.21
PNKP-203ENST00000593946 IGLV11-55A0A075B6I3 123 aa16.35■□□□□ 0.21
PNKP-203ENST00000593946 I3L2K1 104 aa16.35■□□□□ 0.21
PNKP-203ENST00000593946 IGHG2P01859 326 aa16.35■□□□□ 0.21
PNKP-203ENST00000593946 PRH1P02810 166 aa16.35■□□□□ 0.21
PNKP-203ENST00000593946 FHITP49789 147 aa16.35■□□□□ 0.21
PNKP-203ENST00000593946 ECSCRQ19T08 205 aa16.35■□□□□ 0.21
PNKP-203ENST00000593946 UNQ5815/PRO19632Q6UWF5 114 aa16.35■□□□□ 0.21
PNKP-203ENST00000593946 FAM110DQ8TAY7 271 aaPredicted RBP16.35■□□□□ 0.21
PNKP-203ENST00000593946 FANCD2OSQ96PS1 177 aa16.35■□□□□ 0.21
PNKP-203ENST00000593946 TMUB1Q9BVT8 246 aa16.35■□□□□ 0.21
PNKP-203ENST00000593946 MRPL36Q9P0J6 103 aaKnown RBP16.35■□□□□ 0.21
PNKP-203ENST00000593946 AGPAT2O15120 278 aa16.34■□□□□ 0.21
PNKP-203ENST00000593946 TSPAN9O75954 239 aa16.34■□□□□ 0.21
PNKP-203ENST00000593946 MT-CO2P00403 227 aa16.34■□□□□ 0.21
PNKP-203ENST00000593946 IGHV3-48P01763 117 aa16.34■□□□□ 0.21
PNKP-203ENST00000593946 SRP14P37108 136 aaKnown RBP16.34■□□□□ 0.21
PNKP-203ENST00000593946 CAMLGP49069 296 aa16.34■□□□□ 0.21
PNKP-203ENST00000593946 BLCAPP62952 87 aa16.34■□□□□ 0.21
PNKP-203ENST00000593946 BLOC1S1P78537 153 aa16.34■□□□□ 0.21
PNKP-203ENST00000593946 ACY3Q96HD9 319 aa16.34■□□□□ 0.21
PNKP-203ENST00000593946 HOXA3O43365 443 aaPredicted RBP16.33■□□□□ 0.21
PNKP-203ENST00000593946 RAB31Q13636 194 aa16.33■□□□□ 0.21
PNKP-203ENST00000593946 C19orf54Q5BKX5 351 aa16.33■□□□□ 0.21
PNKP-203ENST00000593946 C9orf152Q5JTZ5 239 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms