RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 CYGBQ8WWM9 190 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 MS4A6AQ9H2W1 248 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 S100A14Q9HCY8 104 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 TMEM140Q9NV12 185 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 TAS2R8Q9NYW2 309 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 ANXA10Q9UJ72 324 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 SPATA2Q9UM82 520 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 AK6Q9Y3D8 172 aaKnown RBP6.25□□□□□ -1.41
SMAD4-215ENST00000592911 HERC1Q15751 4861 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 IGKV1D-8A0A087WSZ0 117 aa6.24□□□□□ -1.41
SMAD4-215ENST00000592911 IGKV1D-13A0A0B4J2D9 117 aa6.24□□□□□ -1.41
SMAD4-215ENST00000592911 SCGB2A1O75556 95 aa6.24□□□□□ -1.41
SMAD4-215ENST00000592911 SPART-AS1P0CW21 52 aa6.24□□□□□ -1.41
SMAD4-215ENST00000592911 IGKV1-13P0DP09 117 aa6.24□□□□□ -1.41
SMAD4-215ENST00000592911 BTF3P20290 206 aaKnown RBP6.24□□□□□ -1.41
SMAD4-215ENST00000592911 NFYAP23511 347 aaPredicted RBP6.24□□□□□ -1.41
SMAD4-215ENST00000592911 EIF2B2P49770 351 aaKnown RBP6.24□□□□□ -1.41
SMAD4-215ENST00000592911 PLA2G7Q13093 441 aa6.24□□□□□ -1.41
SMAD4-215ENST00000592911 ZNF124Q15973 351 aa6.24□□□□□ -1.41
SMAD4-215ENST00000592911 TMEM91Q6ZNR0 172 aa6.24□□□□□ -1.41
SMAD4-215ENST00000592911 DMBX1Q8NFW5 382 aa6.24□□□□□ -1.41
SMAD4-215ENST00000592911 MAFIPQ8WZ33 124 aa6.24□□□□□ -1.41
SMAD4-215ENST00000592911 FAM212BQ9NTI7 297 aaPredicted RBP6.24□□□□□ -1.41
SMAD4-215ENST00000592911 PRNDQ9UKY0 176 aa6.24□□□□□ -1.41
SMAD4-215ENST00000592911 IFITM5A6NNB3 132 aa6.23□□□□□ -1.41
SMAD4-215ENST00000592911 MARCH11A6NNE9 402 aa6.23□□□□□ -1.41
SMAD4-215ENST00000592911 M0R2N4 97 aa6.23□□□□□ -1.41
SMAD4-215ENST00000592911 ST8SIA3O43173 380 aa6.23□□□□□ -1.41
SMAD4-215ENST00000592911 YIF1AO95070 293 aa6.23□□□□□ -1.41
SMAD4-215ENST00000592911 NPBWR1P48145 328 aa6.23□□□□□ -1.41
SMAD4-215ENST00000592911 TFPI2P48307 235 aa6.23□□□□□ -1.41
SMAD4-215ENST00000592911 CLDN12P56749 244 aa6.23□□□□□ -1.41
SMAD4-215ENST00000592911 MLLT11Q13015 90 aaPredicted RBP6.23□□□□□ -1.41
SMAD4-215ENST00000592911 C15orf53Q8NAA6 179 aa6.23□□□□□ -1.41
SMAD4-215ENST00000592911 UBAC2Q8NBM4 344 aa6.23□□□□□ -1.41
SMAD4-215ENST00000592911 NARS2Q96I59 477 aaKnown RBP6.23□□□□□ -1.41
SMAD4-215ENST00000592911 DAPK2Q9UIK4 370 aa6.23□□□□□ -1.41
SMAD4-215ENST00000592911 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.23□□□□□ -1.41
SMAD4-215ENST00000592911 TEX50A0A1B0GTY4 177 aa6.22□□□□□ -1.41
SMAD4-215ENST00000592911 I3L2K1 104 aa6.22□□□□□ -1.41
SMAD4-215ENST00000592911 K7EQG2 157 aa6.22□□□□□ -1.41
SMAD4-215ENST00000592911 CASQ2O14958 399 aaPredicted RBP6.22□□□□□ -1.41
SMAD4-215ENST00000592911 ZNF207O43670 478 aaKnown RBP6.22□□□□□ -1.41
SMAD4-215ENST00000592911 GNG7O60262 68 aa6.22□□□□□ -1.41
SMAD4-215ENST00000592911 SNAPC5O75971 98 aa6.22□□□□□ -1.41
SMAD4-215ENST00000592911 HNRNPCP07910 306 aaKnown RBP eCLIP6.22□□□□□ -1.41
SMAD4-215ENST00000592911 C4BPBP20851 252 aa6.22□□□□□ -1.41
SMAD4-215ENST00000592911 GNRHRP30968 328 aa6.22□□□□□ -1.41
SMAD4-215ENST00000592911 ALDH3B2P48448 385 aa6.22□□□□□ -1.41
SMAD4-215ENST00000592911 AP2S1P53680 142 aaPredicted RBP6.22□□□□□ -1.41
SMAD4-215ENST00000592911 LEMD1Q68G75 181 aa6.22□□□□□ -1.41
SMAD4-215ENST00000592911 LAIR2Q6ISS4 152 aa6.22□□□□□ -1.41
SMAD4-215ENST00000592911 ZNF600Q6ZNG1 722 aa6.22□□□□□ -1.41
SMAD4-215ENST00000592911 BPIFB6Q8NFQ5 453 aa6.22□□□□□ -1.41
SMAD4-215ENST00000592911 OR10W1Q8NGF6 305 aa6.22□□□□□ -1.41
SMAD4-215ENST00000592911 OR13F1Q8NGS4 319 aa6.22□□□□□ -1.41
SMAD4-215ENST00000592911 SCN3BQ9NY72 215 aa6.22□□□□□ -1.41
SMAD4-215ENST00000592911 PTTG2Q9NZH5 202 aa6.22□□□□□ -1.41
SMAD4-215ENST00000592911 APOBP04114 4563 aaKnown RBP6.22□□□□□ -1.41
SMAD4-215ENST00000592911 A0A075B6Q4 140 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 HELTA6NFD8 242 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 CORTO00230 105 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 PPYP01298 95 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 NAT1P18440 290 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 MYL9P24844 172 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 F2RP25116 425 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 SCAND1P57086 179 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 GNG2P59768 71 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 RPS25P62851 125 aaKnown RBP6.21□□□□□ -1.42
SMAD4-215ENST00000592911 NDUFA5Q16718 116 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 CNPY1Q3B7I2 92 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 CDNFQ49AH0 187 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 HES5Q5TA89 166 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 OGFRL1Q5TC84 451 aaPredicted RBP6.21□□□□□ -1.42
SMAD4-215ENST00000592911 UBE2UQ5VVX9 321 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 TOMM20LQ6UXN7 152 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 ZNF705AQ6ZN79 300 aaPredicted RBP6.21□□□□□ -1.42
SMAD4-215ENST00000592911 TPRA1Q86W33 373 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 GBGT1Q8N5D6 347 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 SECTM1Q8WVN6 248 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 ST8SIA2Q92186 375 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 CLUHP3Q96NS8 147 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 CELA1Q9UNI1 258 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 OR51B2Q9Y5P1 312 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 PUS1Q9Y606 427 aaKnown RBP eCLIP6.21□□□□□ -1.42
SMAD4-215ENST00000592911 DNAH5Q8TE73 4624 aa6.21□□□□□ -1.42
SMAD4-215ENST00000592911 IGKV3-7A0A075B6H7 116 aa6.2□□□□□ -1.42
SMAD4-215ENST00000592911 IGHV3OR16-8A0A075B7F1 116 aa6.2□□□□□ -1.42
SMAD4-215ENST00000592911 A0A0A6YYH2 397 aa6.2□□□□□ -1.42
SMAD4-215ENST00000592911 TRAV3A0A0B4J244 114 aa6.2□□□□□ -1.42
SMAD4-215ENST00000592911 A0A1B0GVG6 124 aa6.2□□□□□ -1.42
SMAD4-215ENST00000592911 A6NJ64 397 aa6.2□□□□□ -1.42
SMAD4-215ENST00000592911 ZNF705FA8MVS1 300 aaPredicted RBP6.2□□□□□ -1.42
SMAD4-215ENST00000592911 INS-IGF2F8WCM5 200 aa6.2□□□□□ -1.42
SMAD4-215ENST00000592911 J3QRK9 145 aa6.2□□□□□ -1.42
SMAD4-215ENST00000592911 SULT1C2O00338 296 aa6.2□□□□□ -1.42
SMAD4-215ENST00000592911 ZNF705DP0CH99 300 aaPredicted RBP6.2□□□□□ -1.42
SMAD4-215ENST00000592911 ZNF705BP0CI00 300 aaPredicted RBP6.2□□□□□ -1.42
SMAD4-215ENST00000592911 NPPCP23582 126 aa6.2□□□□□ -1.42
SMAD4-215ENST00000592911 CRYBB3P26998 211 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms