RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 GLRX2Q9NS18 164 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 DEPPQ9NTK1 212 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 SPRR3Q9UBC9 169 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 ST3GAL6Q9Y274 331 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 HIVEP2P31629 2446 aa3.31□□□□□ -1.88
LINC00561-201ENST00000565815 FAM24AA6NFZ4 105 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 F5H5K5 113 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 HMGB3O15347 200 aaKnown RBP3.3□□□□□ -1.88
LINC00561-201ENST00000565815 SLC31A2O15432 143 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 CYB5BO43169 146 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 TYMSP04818 313 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 METTL15P1P0C7V9 234 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 LOXP28300 417 aaPredicted RBP3.3□□□□□ -1.88
LINC00561-201ENST00000565815 GNRHRP30968 328 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 AKR1C3P42330 323 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 DYNLT3P51808 116 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 FGF12P61328 243 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 LCN2P80188 198 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 TMEM41BQ5BJD5 291 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 NCMAPQ5T1S8 102 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 CARD17Q5XLA6 110 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 OR2T2Q6IF00 324 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 FIP1L1Q6UN15 594 aaKnown RBP3.3□□□□□ -1.88
LINC00561-201ENST00000565815 Q8NBF4 154 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 OR5D18Q8NGL1 313 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 OR5L1Q8NGL2 311 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 OR10D4PQ8NGN7 298 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 TMEM45BQ96B21 275 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 S100PBPQ96BU1 408 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 OR5B12Q96R08 314 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 CABLES2Q9BTV7 478 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 LINC00470Q9BZP3 86 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 SIRPDQ9H106 197 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 SH3BGRL3Q9H299 93 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 ZNF442Q9H7R0 627 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 TMEM38BQ9NVV0 291 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 FOXA2Q9Y261 457 aaPredicted RBP3.3□□□□□ -1.88
LINC00561-201ENST00000565815 SPTBP11277 2137 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 MTORP42345 2549 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 TRAV9-1A0A075B6T8 112 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 IGHV3-38A0A0C4DH36 116 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 M0QZK8 103 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 GGCTO75223 188 aaKnown RBP3.3□□□□□ -1.88
LINC00561-201ENST00000565815 CBR3O75828 277 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 NXPH4O95158 308 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 FXYD4P59646 89 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 SPCS3P61009 180 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 MRGPRG-AS1Q2M3A8 158 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 RSPO1Q2MKA7 263 aaPredicted RBP3.3□□□□□ -1.88
LINC00561-201ENST00000565815 SLC25A24Q6NUK1 477 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 ZNF880Q6PDB4 577 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 P4HA3Q7Z4N8 544 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 C3orf56Q8N813 242 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 CYB561D1Q8N8Q1 229 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 OR10G3Q8NGC4 313 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 PACRGQ96M98 296 aaPredicted RBP3.3□□□□□ -1.88
LINC00561-201ENST00000565815 TP53RKQ96S44 253 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 C20orf24Q9BUV8 137 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 MAGT1Q9H0U3 335 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 RNF115Q9Y4L5 304 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 SELENOKQ9Y6D0 94 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 CHCHD2Q9Y6H1 151 aaPredicted RBP3.3□□□□□ -1.88
LINC00561-201ENST00000565815 FN1P02751 2386 aaKnown RBP3.3□□□□□ -1.88
LINC00561-201ENST00000565815 LAMA5O15230 3695 aa3.3□□□□□ -1.88
LINC00561-201ENST00000565815 A0A0U1RRA0 63 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 TNFSF11O14788 317 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 PHOX2AO14813 284 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 SSSCA1O60232 199 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 RAMP1O60894 148 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 OR2J2O76002 312 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 KBTBD11O94819 623 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 YIF1AO95070 293 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 HLA-HP01893 362 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 F2RP25116 425 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 GDF1P27539 372 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 FHITP49789 147 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 CNN1P51911 297 aaKnown RBP3.29□□□□□ -1.88
LINC00561-201ENST00000565815 HAGHQ16775 308 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 IQCJQ1A5X6 159 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 LRRC75BQ2VPJ9 315 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 SP6Q3SY56 376 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 PLCXD3Q63HM9 321 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 KCNIP4Q6PIL6 250 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 BTNL3Q6UXE8 466 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 Q8IYB0 196 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 ZNRF1Q8ND25 227 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 AKR7LQ8NHP1 331 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 PLPPR1Q8TBJ4 325 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 C14orf144Q96I85 54 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 WFIKKN1Q96NZ8 548 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 RARRES2Q99969 163 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 NDUFAF3Q9BU61 184 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 CLCF1Q9UBD9 225 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 BSNQ9UPA5 3926 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 FREM3P0C091 2139 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 PINLYPA6NC86 204 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 SLC22A20A6NK97 555 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 OR5B21A6NL26 309 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 C17orf51A8MQB3 221 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 SERPINE2P07093 398 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms