RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 TMEM61Q8N0U2 210 aa12.61□□□□□ -0.39
USB1-211ENST00000565662 UBAC2Q8NBM4 344 aa12.61□□□□□ -0.39
USB1-211ENST00000565662 OR52E5Q8NH55 327 aa12.61□□□□□ -0.39
USB1-211ENST00000565662 RBPMSQ93062 196 aaKnown RBP12.61□□□□□ -0.39
USB1-211ENST00000565662 MISP3Q96FF7 219 aa12.61□□□□□ -0.39
USB1-211ENST00000565662 TP53RKQ96S44 253 aa12.61□□□□□ -0.39
USB1-211ENST00000565662 TMEM222Q9H0R3 208 aa12.61□□□□□ -0.39
USB1-211ENST00000565662 S4R3C0 116 aa12.61□□□□□ -0.39
USB1-211ENST00000565662 OR4C46A6NHA9 309 aa12.6□□□□□ -0.39
USB1-211ENST00000565662 CTDSP2O14595 271 aa12.6□□□□□ -0.39
USB1-211ENST00000565662 TSPAN4O14817 238 aa12.6□□□□□ -0.39
USB1-211ENST00000565662 P0C879 139 aa12.6□□□□□ -0.39
USB1-211ENST00000565662 ANXA3P12429 323 aa12.6□□□□□ -0.39
USB1-211ENST00000565662 HOXA1P49639 335 aaPredicted RBP12.6□□□□□ -0.39
USB1-211ENST00000565662 SRPXP78539 464 aa12.6□□□□□ -0.39
USB1-211ENST00000565662 DUSP18Q8NEJ0 188 aa12.6□□□□□ -0.39
USB1-211ENST00000565662 MARCH1Q8TCQ1 289 aa12.6□□□□□ -0.39
USB1-211ENST00000565662 IL22RA2Q969J5 263 aa12.6□□□□□ -0.39
USB1-211ENST00000565662 WDR89Q96FK6 387 aaPredicted RBP12.6□□□□□ -0.39
USB1-211ENST00000565662 NAA60Q9H7X0 242 aa12.6□□□□□ -0.39
USB1-211ENST00000565662 SRD5A3Q9H8P0 318 aa12.6□□□□□ -0.39
USB1-211ENST00000565662 MLXQ9UH92 298 aa12.6□□□□□ -0.39
USB1-211ENST00000565662 RPS10-NUDT3A0A1W2PQS6 291 aa12.59□□□□□ -0.39
USB1-211ENST00000565662 ANKRD20A5PA0PJZ0 165 aa12.59□□□□□ -0.39
USB1-211ENST00000565662 H3BMQ9 156 aa12.59□□□□□ -0.39
USB1-211ENST00000565662 CDS2O95674 445 aa12.59□□□□□ -0.39
USB1-211ENST00000565662 LYL1P12980 280 aa12.59□□□□□ -0.39
USB1-211ENST00000565662 S100A5P33763 92 aa12.59□□□□□ -0.39
USB1-211ENST00000565662 AARDQ4LEZ3 155 aa12.59□□□□□ -0.39
USB1-211ENST00000565662 TM4SF20Q53R12 229 aa12.59□□□□□ -0.39
USB1-211ENST00000565662 UNQ9165/PRO28630Q6UXU0 137 aa12.59□□□□□ -0.39
USB1-211ENST00000565662 OR4C16Q8NGL9 310 aa12.59□□□□□ -0.39
USB1-211ENST00000565662 MCFD2Q8NI22 146 aa12.59□□□□□ -0.39
USB1-211ENST00000565662 SLIRPQ9GZT3 109 aaKnown RBP12.59□□□□□ -0.39
USB1-211ENST00000565662 TMEM231Q9H6L2 316 aa12.59□□□□□ -0.39
USB1-211ENST00000565662 FABP12A6NFH5 140 aa12.58□□□□□ -0.4
USB1-211ENST00000565662 DBX1A6NMT0 343 aa12.58□□□□□ -0.4
USB1-211ENST00000565662 I3L2K1 104 aa12.58□□□□□ -0.4
USB1-211ENST00000565662 MT-CO2P00403 227 aa12.58□□□□□ -0.4
USB1-211ENST00000565662 IGKV1-5P01602 117 aa12.58□□□□□ -0.4
USB1-211ENST00000565662 PI3P19957 117 aa12.58□□□□□ -0.4
USB1-211ENST00000565662 MFAP2P55001 183 aa12.58□□□□□ -0.4
USB1-211ENST00000565662 SPCS3P61009 180 aa12.58□□□□□ -0.4
USB1-211ENST00000565662 LINC00322Q6ZN03 302 aaPredicted RBP12.58□□□□□ -0.4
USB1-211ENST00000565662 OR4D10Q8NGI6 311 aa12.58□□□□□ -0.4
USB1-211ENST00000565662 CACNG8Q8WXS5 425 aa12.58□□□□□ -0.4
USB1-211ENST00000565662 GALNT14Q96FL9 552 aa12.58□□□□□ -0.4
USB1-211ENST00000565662 OR10C1Q96KK4 312 aa12.58□□□□□ -0.4
USB1-211ENST00000565662 NXF2Q9GZY0 626 aaKnown RBP12.58□□□□□ -0.4
USB1-211ENST00000565662 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.58□□□□□ -0.4
USB1-211ENST00000565662 CRYM-AS1A6NIL9 109 aa12.57□□□□□ -0.4
USB1-211ENST00000565662 ZNF701M0R085 212 aaPredicted RBP12.57□□□□□ -0.4
USB1-211ENST00000565662 ST8SIA3O43173 380 aa12.57□□□□□ -0.4
USB1-211ENST00000565662 CTSGP08311 255 aa12.57□□□□□ -0.4
USB1-211ENST00000565662 CD7P09564 240 aa12.57□□□□□ -0.4
USB1-211ENST00000565662 HTR2BP41595 481 aa12.57□□□□□ -0.4
USB1-211ENST00000565662 APOC4P55056 127 aa12.57□□□□□ -0.4
USB1-211ENST00000565662 C20orf24Q9BUV8 137 aa12.57□□□□□ -0.4
USB1-211ENST00000565662 GGTLC1Q9BX51 225 aa12.57□□□□□ -0.4
USB1-211ENST00000565662 GPR132Q9UNW8 380 aa12.57□□□□□ -0.4
USB1-211ENST00000565662 TRAV30A0A087WSZ9 112 aa12.56□□□□□ -0.4
USB1-211ENST00000565662 LOC102724200A0A096LPH7 203 aaPredicted RBP12.56□□□□□ -0.4
USB1-211ENST00000565662 A0A0B4J293 547 aa12.56□□□□□ -0.4
USB1-211ENST00000565662 F8W735 103 aaPredicted RBP12.56□□□□□ -0.4
USB1-211ENST00000565662 SCAF4O95104 1147 aaKnown RBP12.56□□□□□ -0.4
USB1-211ENST00000565662 OR5AC1P0C628 307 aa12.56□□□□□ -0.4
USB1-211ENST00000565662 PAFAH1B2P68402 229 aa12.56□□□□□ -0.4
USB1-211ENST00000565662 PVRIGQ6DKI7 326 aa12.56□□□□□ -0.4
USB1-211ENST00000565662 ZNF600Q6ZNG1 722 aa12.56□□□□□ -0.4
USB1-211ENST00000565662 PINX1Q96BK5 328 aaKnown RBP12.56□□□□□ -0.4
USB1-211ENST00000565662 NARS2Q96I59 477 aaKnown RBP12.56□□□□□ -0.4
USB1-211ENST00000565662 CHRDL1Q9BU40 450 aa12.56□□□□□ -0.4
USB1-211ENST00000565662 HIPK2Q9H2X6 1198 aa12.56□□□□□ -0.4
USB1-211ENST00000565662 TMEM56-RWDD3S4R434 201 aa12.56□□□□□ -0.4
USB1-211ENST00000565662 DUXBA0A1W2PPF3 345 aa12.55□□□□□ -0.4
USB1-211ENST00000565662 CCDC160A6NGH7 325 aa12.55□□□□□ -0.4
USB1-211ENST00000565662 UBE2CO00762 179 aa12.55□□□□□ -0.4
USB1-211ENST00000565662 YIF1AO95070 293 aa12.55□□□□□ -0.4
USB1-211ENST00000565662 ADMP35318 185 aa12.55□□□□□ -0.4
USB1-211ENST00000565662 ETFRF1Q6IPR1 90 aa12.55□□□□□ -0.4
USB1-211ENST00000565662 DEFB125Q8N687 156 aa12.55□□□□□ -0.4
USB1-211ENST00000565662 OR51S1Q8NGJ8 323 aa12.55□□□□□ -0.4
USB1-211ENST00000565662 GLYATL2Q8WU03 294 aa12.55□□□□□ -0.4
USB1-211ENST00000565662 EDA2RQ9HAV5 297 aa12.55□□□□□ -0.4
USB1-211ENST00000565662 TRAV14DV4A0A0A6YYC5 116 aa12.54□□□□□ -0.4
USB1-211ENST00000565662 IGHV3-35A0A0C4DH35 117 aa12.54□□□□□ -0.4
USB1-211ENST00000565662 IGHV7-4-1A0A0J9YVY3 117 aa12.54□□□□□ -0.4
USB1-211ENST00000565662 A0A1W2PS18 150 aa12.54□□□□□ -0.4
USB1-211ENST00000565662 SLC25A4P12235 298 aa12.54□□□□□ -0.4
USB1-211ENST00000565662 TNFSF8P32971 234 aa12.54□□□□□ -0.4
USB1-211ENST00000565662 OPRK1P41145 380 aa12.54□□□□□ -0.4
USB1-211ENST00000565662 ATP5IP56385 69 aaPredicted RBP12.54□□□□□ -0.4
USB1-211ENST00000565662 CASC10Q5T4H9 136 aa12.54□□□□□ -0.4
USB1-211ENST00000565662 TMEM116Q8NCL8 245 aa12.54□□□□□ -0.4
USB1-211ENST00000565662 RNASEH2CQ8TDP1 164 aaKnown RBP12.54□□□□□ -0.4
USB1-211ENST00000565662 RTBDNQ9BSG5 229 aaPredicted RBP12.54□□□□□ -0.4
USB1-211ENST00000565662 MCUBQ9NWR8 336 aa12.54□□□□□ -0.4
USB1-211ENST00000565662 SMPXQ9UHP9 88 aa12.54□□□□□ -0.4
USB1-211ENST00000565662 TP53TG1Q9Y2A0 90 aa12.54□□□□□ -0.4
USB1-211ENST00000565662 IGHV3-21A0A0B4J1V1 117 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms