RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 MISP3Q96FF7 219 aa12.35□□□□□ -0.43
CCNF-203ENST00000564236 TRAV14DV4A0A0A6YYC5 116 aa12.34□□□□□ -0.43
CCNF-203ENST00000564236 ZNF207O43670 478 aaKnown RBP12.34□□□□□ -0.43
CCNF-203ENST00000564236 GABARAPO95166 117 aa12.34□□□□□ -0.43
CCNF-203ENST00000564236 IGKV1-5P01602 117 aa12.34□□□□□ -0.43
CCNF-203ENST00000564236 CTF1Q16619 201 aa12.34□□□□□ -0.43
CCNF-203ENST00000564236 VSIRQ9H7M9 311 aa12.34□□□□□ -0.43
CCNF-203ENST00000564236 KLK11Q9UBX7 282 aa12.34□□□□□ -0.43
CCNF-203ENST00000564236 MTFP1Q9UDX5 166 aa12.34□□□□□ -0.43
CCNF-203ENST00000564236 A0A0B4J293 547 aa12.33□□□□□ -0.44
CCNF-203ENST00000564236 M0QYG6 137 aa12.33□□□□□ -0.44
CCNF-203ENST00000564236 PIGPP57054 158 aa12.33□□□□□ -0.44
CCNF-203ENST00000564236 AARDQ4LEZ3 155 aa12.33□□□□□ -0.44
CCNF-203ENST00000564236 RNASE10Q5GAN6 216 aaKnown RBP12.33□□□□□ -0.44
CCNF-203ENST00000564236 MZT2AQ6P582 158 aa12.33□□□□□ -0.44
CCNF-203ENST00000564236 AP3S1Q92572 193 aa12.33□□□□□ -0.44
CCNF-203ENST00000564236 TP53RKQ96S44 253 aa12.33□□□□□ -0.44
CCNF-203ENST00000564236 TRAV2A0A0B4J234 112 aa12.32□□□□□ -0.44
CCNF-203ENST00000564236 GNG7O60262 68 aa12.32□□□□□ -0.44
CCNF-203ENST00000564236 B3GALNT1O75752 331 aa12.32□□□□□ -0.44
CCNF-203ENST00000564236 ATG12O94817 140 aa12.32□□□□□ -0.44
CCNF-203ENST00000564236 CD74P04233 296 aa12.32□□□□□ -0.44
CCNF-203ENST00000564236 CD3DP04234 171 aa12.32□□□□□ -0.44
CCNF-203ENST00000564236 NPBWR1P48145 328 aa12.32□□□□□ -0.44
CCNF-203ENST00000564236 CEMP1Q6PRD7 247 aaPredicted RBP12.32□□□□□ -0.44
CCNF-203ENST00000564236 TMEM217Q8N7C4 229 aa12.32□□□□□ -0.44
CCNF-203ENST00000564236 C15orf40Q8WUR7 153 aa12.32□□□□□ -0.44
CCNF-203ENST00000564236 GINS3Q9BRX5 216 aa12.32□□□□□ -0.44
CCNF-203ENST00000564236 C6orf62Q9GZU0 229 aaPredicted RBP12.32□□□□□ -0.44
CCNF-203ENST00000564236 CORTO00230 105 aa12.31□□□□□ -0.44
CCNF-203ENST00000564236 YIF1AO95070 293 aa12.31□□□□□ -0.44
CCNF-203ENST00000564236 ZNF182P17025 639 aaPredicted RBP12.31□□□□□ -0.44
CCNF-203ENST00000564236 IZUMO4Q1ZYL8 232 aa12.31□□□□□ -0.44
CCNF-203ENST00000564236 BSXQ3C1V8 233 aa12.31□□□□□ -0.44
CCNF-203ENST00000564236 TOMM20LQ6UXN7 152 aa12.31□□□□□ -0.44
CCNF-203ENST00000564236 APRG1Q8IVJ8 170 aa12.31□□□□□ -0.44
CCNF-203ENST00000564236 DUSP18Q8NEJ0 188 aa12.31□□□□□ -0.44
CCNF-203ENST00000564236 OR52I2Q8NH67 350 aa12.31□□□□□ -0.44
CCNF-203ENST00000564236 GATAD1Q8WUU5 269 aa12.31□□□□□ -0.44
CCNF-203ENST00000564236 ABHD1Q96SE0 405 aa12.31□□□□□ -0.44
CCNF-203ENST00000564236 CSTL1Q9H114 145 aa12.31□□□□□ -0.44
CCNF-203ENST00000564236 ZFAND3Q9H8U3 227 aa12.31□□□□□ -0.44
CCNF-203ENST00000564236 C3orf85A0A1B0GTC6 90 aa12.3□□□□□ -0.44
CCNF-203ENST00000564236 CXorf65A6NEN9 183 aa12.3□□□□□ -0.44
CCNF-203ENST00000564236 ST8SIA3O43173 380 aa12.3□□□□□ -0.44
CCNF-203ENST00000564236 RNASE2P10153 161 aaKnown RBP12.3□□□□□ -0.44
CCNF-203ENST00000564236 RPL35AP18077 110 aaKnown RBP12.3□□□□□ -0.44
CCNF-203ENST00000564236 UCP1P25874 307 aa12.3□□□□□ -0.44
CCNF-203ENST00000564236 RPL5P46777 297 aaKnown RBP12.3□□□□□ -0.44
CCNF-203ENST00000564236 ZNF600Q6ZNG1 722 aa12.3□□□□□ -0.44
CCNF-203ENST00000564236 TMEM229BQ8NBD8 167 aa12.3□□□□□ -0.44
CCNF-203ENST00000564236 TERB2Q8NHR7 220 aa12.3□□□□□ -0.44
CCNF-203ENST00000564236 ZFAND1Q8TCF1 268 aa12.3□□□□□ -0.44
CCNF-203ENST00000564236 PINX1Q96BK5 328 aaKnown RBP12.3□□□□□ -0.44
CCNF-203ENST00000564236 EXTL2Q9UBQ6 330 aa12.3□□□□□ -0.44
CCNF-203ENST00000564236 MPTX1A8MV57 137 aa12.29□□□□□ -0.44
CCNF-203ENST00000564236 FAM25AB3EWG3 89 aa12.29□□□□□ -0.44
CCNF-203ENST00000564236 FAM25CB3EWG5 89 aa12.29□□□□□ -0.44
CCNF-203ENST00000564236 FAM25GB3EWG6 89 aa12.29□□□□□ -0.44
CCNF-203ENST00000564236 DFFBO76075 338 aa12.29□□□□□ -0.44
CCNF-203ENST00000564236 TMEM50AO95807 157 aa12.29□□□□□ -0.44
CCNF-203ENST00000564236 IGHV3-48P01763 117 aa12.29□□□□□ -0.44
CCNF-203ENST00000564236 SMIM18P0DKX4 95 aa12.29□□□□□ -0.44
CCNF-203ENST00000564236 PGAM2P15259 253 aa12.29□□□□□ -0.44
CCNF-203ENST00000564236 PI3P19957 117 aa12.29□□□□□ -0.44
CCNF-203ENST00000564236 SNCAP37840 140 aa12.29□□□□□ -0.44
CCNF-203ENST00000564236 AKR1C2P52895 323 aa12.29□□□□□ -0.44
CCNF-203ENST00000564236 PAFAH1B2P68402 229 aa12.29□□□□□ -0.44
CCNF-203ENST00000564236 SSBP1Q04837 148 aaKnown RBP12.29□□□□□ -0.44
CCNF-203ENST00000564236 SLC35G3Q8N808 338 aa12.29□□□□□ -0.44
CCNF-203ENST00000564236 NAA50Q9GZZ1 169 aaKnown RBP12.29□□□□□ -0.44
CCNF-203ENST00000564236 KMT2AQ03164 3969 aa12.28□□□□□ -0.44
CCNF-203ENST00000564236 IGHV3-49A0A0A0MS15 119 aa12.28□□□□□ -0.44
CCNF-203ENST00000564236 SUB1P53999 127 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCNF-203ENST00000564236 TAS2R19P59542 299 aa12.28□□□□□ -0.44
CCNF-203ENST00000564236 PMS2P11Q13670 270 aa12.28□□□□□ -0.44
CCNF-203ENST00000564236 ZNF124Q15973 351 aa12.28□□□□□ -0.44
CCNF-203ENST00000564236 TCF24Q7RTU0 167 aa12.28□□□□□ -0.44
CCNF-203ENST00000564236 FAM219AQ8IW50 185 aa12.28□□□□□ -0.44
CCNF-203ENST00000564236 LILRB2Q8N423 598 aa12.28□□□□□ -0.44
CCNF-203ENST00000564236 CCDC71LQ8N9Z2 235 aa12.28□□□□□ -0.44
CCNF-203ENST00000564236 OR4D10Q8NGI6 311 aa12.28□□□□□ -0.44
CCNF-203ENST00000564236 OR4X1Q8NH49 305 aa12.28□□□□□ -0.44
CCNF-203ENST00000564236 OR52E5Q8NH55 327 aa12.28□□□□□ -0.44
CCNF-203ENST00000564236 ST8SIA2Q92186 375 aa12.28□□□□□ -0.44
CCNF-203ENST00000564236 C11orf68Q9H3H3 251 aaKnown RBP12.28□□□□□ -0.44
CCNF-203ENST00000564236 KLK5Q9Y337 293 aaPredicted RBP12.28□□□□□ -0.44
CCNF-203ENST00000564236 PUS1Q9Y606 427 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCNF-203ENST00000564236 A0A0G2JRQ6 117 aa12.27□□□□□ -0.45
CCNF-203ENST00000564236 A0A1B0GU03 582 aa12.27□□□□□ -0.45
CCNF-203ENST00000564236 GABARAPH6UMI1 98 aa12.27□□□□□ -0.45
CCNF-203ENST00000564236 CDS2O95674 445 aa12.27□□□□□ -0.45
CCNF-203ENST00000564236 IFNA17P01571 189 aa12.27□□□□□ -0.45
CCNF-203ENST00000564236 APOHP02749 345 aaPredicted RBP12.27□□□□□ -0.45
CCNF-203ENST00000564236 MRPS10P82664 201 aaKnown RBP12.27□□□□□ -0.45
CCNF-203ENST00000564236 SPINK9Q5DT21 86 aa12.27□□□□□ -0.45
CCNF-203ENST00000564236 GPR107Q5VW38 600 aa12.27□□□□□ -0.45
CCNF-203ENST00000564236 OR13C8Q8NGS7 320 aa12.27□□□□□ -0.45
CCNF-203ENST00000564236 MS4A6AQ9H2W1 248 aa12.27□□□□□ -0.45
CCNF-203ENST00000564236 FNDC4Q9H6D8 234 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms