RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 IFNA4P05014 189 aa17.67■□□□□ 0.42
SYNGR3-202ENST00000562045 RNASE2P10153 161 aaKnown RBP17.67■□□□□ 0.42
SYNGR3-202ENST00000562045 NDPQ00604 133 aa17.67■□□□□ 0.42
SYNGR3-202ENST00000562045 ARL16Q0P5N6 197 aa17.67■□□□□ 0.42
SYNGR3-202ENST00000562045 ETV3LQ6ZN32 361 aa17.67■□□□□ 0.42
SYNGR3-202ENST00000562045 HAPLN4Q86UW8 402 aa17.67■□□□□ 0.42
SYNGR3-202ENST00000562045 LILRB2Q8N423 598 aa17.67■□□□□ 0.42
SYNGR3-202ENST00000562045 TMEM170AQ8WVE7 144 aa17.67■□□□□ 0.42
SYNGR3-202ENST00000562045 SLA2Q9H6Q3 261 aa17.67■□□□□ 0.42
SYNGR3-202ENST00000562045 CYTL1Q9NRR1 136 aa17.67■□□□□ 0.42
SYNGR3-202ENST00000562045 SERTAD4Q9NUC0 356 aa17.67■□□□□ 0.42
SYNGR3-202ENST00000562045 DFFBO76075 338 aa17.66■□□□□ 0.42
SYNGR3-202ENST00000562045 JTBO76095 146 aa17.66■□□□□ 0.42
SYNGR3-202ENST00000562045 AREGP15514 252 aa17.66■□□□□ 0.42
SYNGR3-202ENST00000562045 KRTAP10-3P60369 221 aa17.66■□□□□ 0.42
SYNGR3-202ENST00000562045 SLC38A11Q08AI6 406 aa17.66■□□□□ 0.42
SYNGR3-202ENST00000562045 ZNF266Q14584 549 aa17.66■□□□□ 0.42
SYNGR3-202ENST00000562045 ZNF114Q8NC26 417 aa17.66■□□□□ 0.42
SYNGR3-202ENST00000562045 HSPB9Q9BQS6 159 aa17.66■□□□□ 0.42
SYNGR3-202ENST00000562045 FAM103A1Q9BTL3 118 aaKnown RBP17.66■□□□□ 0.42
SYNGR3-202ENST00000562045 PRSS22Q9GZN4 317 aa17.66■□□□□ 0.42
SYNGR3-202ENST00000562045 RNF114Q9Y508 228 aa17.66■□□□□ 0.42
SYNGR3-202ENST00000562045 BORCS7-ASMTA0A0B4J1R7 106 aa17.65■□□□□ 0.42
SYNGR3-202ENST00000562045 LINC01548A6NM66 108 aa17.65■□□□□ 0.42
SYNGR3-202ENST00000562045 ATP6V1G1O75348 118 aa17.65■□□□□ 0.42
SYNGR3-202ENST00000562045 APELAP0DMC3 54 aa17.65■□□□□ 0.42
SYNGR3-202ENST00000562045 PROK1P58294 105 aa17.65■□□□□ 0.42
SYNGR3-202ENST00000562045 EIF5AP63241 154 aaKnown RBP17.65■□□□□ 0.42
SYNGR3-202ENST00000562045 ATP5SQ99766 215 aa17.65■□□□□ 0.42
SYNGR3-202ENST00000562045 PLXNB1O43157 2135 aa17.65■□□□□ 0.42
SYNGR3-202ENST00000562045 REG1AP05451 166 aa17.64■□□□□ 0.41
SYNGR3-202ENST00000562045 ATP6V1FQ16864 119 aa17.64■□□□□ 0.41
SYNGR3-202ENST00000562045 C9orf152Q5JTZ5 239 aa17.64■□□□□ 0.41
SYNGR3-202ENST00000562045 RPL7L1Q6DKI1 246 aaKnown RBP17.64■□□□□ 0.41
SYNGR3-202ENST00000562045 HIST2H2BDQ6DRA6 164 aa17.64■□□□□ 0.41
SYNGR3-202ENST00000562045 STOML3Q8TAV4 291 aa17.64■□□□□ 0.41
SYNGR3-202ENST00000562045 P2RX4Q99571 388 aa17.64■□□□□ 0.41
SYNGR3-202ENST00000562045 WFDC1Q9HC57 220 aa17.64■□□□□ 0.41
SYNGR3-202ENST00000562045 HAX1O00165 279 aa17.64■□□□□ 0.41
SYNGR3-202ENST00000562045 TPT1P13693 172 aaKnown RBP17.64■□□□□ 0.41
SYNGR3-202ENST00000562045 C12orf54Q6X4T0 127 aa17.64■□□□□ 0.41
SYNGR3-202ENST00000562045 UBAC2Q8NBM4 344 aa17.64■□□□□ 0.41
SYNGR3-202ENST00000562045 OR2T6Q8NHC8 308 aa17.64■□□□□ 0.41
SYNGR3-202ENST00000562045 PARP11Q9NR21 331 aa17.64■□□□□ 0.41
SYNGR3-202ENST00000562045 OR1P1Q8NH06 330 aa17.63■□□□□ 0.41
SYNGR3-202ENST00000562045 SGMS2Q8NHU3 365 aa17.63■□□□□ 0.41
SYNGR3-202ENST00000562045 ST8SIA2Q92186 375 aa17.63■□□□□ 0.41
SYNGR3-202ENST00000562045 GGACTQ9BVM4 153 aa17.63■□□□□ 0.41
SYNGR3-202ENST00000562045 PRSS46E5RG02 174 aa17.62■□□□□ 0.41
SYNGR3-202ENST00000562045 IFITM2Q01629 132 aa17.62■□□□□ 0.41
SYNGR3-202ENST00000562045 FBXO7Q9Y3I1 522 aa17.62■□□□□ 0.41
SYNGR3-202ENST00000562045 F11RQ9Y624 299 aaKnown RBP17.62■□□□□ 0.41
SYNGR3-202ENST00000562045 ATP6V0E1O15342 81 aa17.61■□□□□ 0.41
SYNGR3-202ENST00000562045 EGR2P11161 476 aaPredicted RBP17.61■□□□□ 0.41
SYNGR3-202ENST00000562045 CTRB1P17538 263 aa17.61■□□□□ 0.41
SYNGR3-202ENST00000562045 CTRB2Q6GPI1 263 aa17.61■□□□□ 0.41
SYNGR3-202ENST00000562045 TEX261Q6UWH6 196 aa17.61■□□□□ 0.41
SYNGR3-202ENST00000562045 BAP18Q8IXM2 172 aa17.61■□□□□ 0.41
SYNGR3-202ENST00000562045 RNASEH2CQ8TDP1 164 aaKnown RBP17.61■□□□□ 0.41
SYNGR3-202ENST00000562045 WFDC12Q8WWY7 111 aa17.61■□□□□ 0.41
SYNGR3-202ENST00000562045 TMEM147Q9BVK8 224 aa17.61■□□□□ 0.41
SYNGR3-202ENST00000562045 NPIPB5A8MRT5 1133 aa17.61■□□□□ 0.41
SYNGR3-202ENST00000562045 IFNA5P01569 189 aa17.61■□□□□ 0.41
SYNGR3-202ENST00000562045 DLK1P80370 383 aa17.61■□□□□ 0.41
SYNGR3-202ENST00000562045 LFNGQ8NES3 379 aa17.61■□□□□ 0.41
SYNGR3-202ENST00000562045 OR1L6Q8NGR2 347 aa17.61■□□□□ 0.41
SYNGR3-202ENST00000562045 TMEM68Q96MH6 324 aa17.61■□□□□ 0.41
SYNGR3-202ENST00000562045 UQCC1Q9NVA1 299 aa17.61■□□□□ 0.41
SYNGR3-202ENST00000562045 CORTO00230 105 aa17.6■□□□□ 0.41
SYNGR3-202ENST00000562045 CRYGCP07315 174 aa17.6■□□□□ 0.41
SYNGR3-202ENST00000562045 ASPHD1Q5U4P2 390 aa17.6■□□□□ 0.41
SYNGR3-202ENST00000562045 PVRIGQ6DKI7 326 aa17.6■□□□□ 0.41
SYNGR3-202ENST00000562045 SLC25A24Q6NUK1 477 aa17.6■□□□□ 0.41
SYNGR3-202ENST00000562045 TTC9CQ8N5M4 171 aa17.6■□□□□ 0.41
SYNGR3-202ENST00000562045 SPATA3Q8NHX4 192 aa17.6■□□□□ 0.41
SYNGR3-202ENST00000562045 LINC00527Q9UJ94 153 aa17.6■□□□□ 0.41
SYNGR3-202ENST00000562045 A0A1B0GUS0 222 aa17.59■□□□□ 0.41
SYNGR3-202ENST00000562045 IGHG2P01859 326 aa17.59■□□□□ 0.41
SYNGR3-202ENST00000562045 DEFA4P12838 97 aa17.59■□□□□ 0.41
SYNGR3-202ENST00000562045 VWC2Q2TAL6 325 aa17.59■□□□□ 0.41
SYNGR3-202ENST00000562045 ARSJQ5FYB0 599 aaPredicted RBP17.59■□□□□ 0.41
SYNGR3-202ENST00000562045 KLHDC1Q8N7A1 406 aa17.59■□□□□ 0.41
SYNGR3-202ENST00000562045 PHYHIPLQ96FC7 376 aa17.59■□□□□ 0.41
SYNGR3-202ENST00000562045 NOL4LQ96MY1 436 aaPredicted RBP17.59■□□□□ 0.41
SYNGR3-202ENST00000562045 WNT10AQ9GZT5 417 aa17.59■□□□□ 0.41
SYNGR3-202ENST00000562045 FBXO24O75426 580 aa17.58■□□□□ 0.41
SYNGR3-202ENST00000562045 C10orf99Q6UWK7 81 aa17.58■□□□□ 0.41
SYNGR3-202ENST00000562045 SLC35E3Q7Z769 313 aa17.58■□□□□ 0.41
SYNGR3-202ENST00000562045 C3orf56Q8N813 242 aa17.58■□□□□ 0.41
SYNGR3-202ENST00000562045 CFDP00746 253 aaPredicted RBP17.58■□□□□ 0.4
SYNGR3-202ENST00000562045 IFNA7P01567 189 aa17.58■□□□□ 0.4
SYNGR3-202ENST00000562045 ECSCRQ19T08 205 aa17.58■□□□□ 0.4
SYNGR3-202ENST00000562045 AKIRIN2Q53H80 203 aa17.58■□□□□ 0.4
SYNGR3-202ENST00000562045 UNQ5815/PRO19632Q6UWF5 114 aa17.58■□□□□ 0.4
SYNGR3-202ENST00000562045 WIPF2Q8TF74 440 aaPredicted RBP17.58■□□□□ 0.4
SYNGR3-202ENST00000562045 PARD6GQ9BYG4 376 aaPredicted RBP17.58■□□□□ 0.4
SYNGR3-202ENST00000562045 ARV1Q9H2C2 271 aa17.58■□□□□ 0.4
SYNGR3-202ENST00000562045 UBE2L5PA0A1B0GUS4 154 aa17.57■□□□□ 0.4
SYNGR3-202ENST00000562045 FNDC10F2Z333 226 aa17.57■□□□□ 0.4
SYNGR3-202ENST00000562045 CYB5BO43169 146 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms