RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 ZFHX4Q86UP3 3567 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 SVILO95425 2214 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 IZUMO1RA6ND01 250 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 C15orf62A8K5M9 175 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 M0R2Z0 102 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 PDLIM3Q53GG5 364 aaPredicted RBP11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 Q56UQ5 140 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 AMMECR1LQ6DCA0 310 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 LHFPL4Q7Z7J7 247 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 ZNF430Q9H8G1 570 aaPredicted RBP11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 OR2T8A6NH00 312 aa11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 C2orf70A6NJV1 201 aa11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 CRXO43186 299 aaPredicted RBP11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 G6PCP35575 357 aa11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 SLC25A34Q6PIV7 304 aa11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 COMMD5Q9GZQ3 224 aa11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 FAM215AQ9Y5M1 114 aa11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 HEATR1Q9H583 2144 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 C12orf77C9JDV5 145 aa11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 BMI1P35226 326 aa11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 TMPRSS3P57727 454 aa11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 PSG9Q00887 426 aa11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 RELBQ01201 579 aa11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 TIGITQ495A1 244 aa11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 CENPWQ5EE01 88 aa11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 EBLN2Q6P2I7 272 aa11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 OR4S2Q8NH73 311 aa11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 TMEM70Q9BUB7 260 aa11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 ZNF331Q9NQX6 463 aaPredicted RBP11.47□□□□□ -0.57
RABGGTA-220ENST00000560998 DSPP15924 2871 aaKnown RBP11.46□□□□□ -0.57
RABGGTA-220ENST00000560998 DOCK11Q5JSL3 2073 aa11.46□□□□□ -0.57
RABGGTA-220ENST00000560998 RRHO14718 337 aa11.46□□□□□ -0.58
RABGGTA-220ENST00000560998 NUDT3O95989 172 aa11.46□□□□□ -0.58
RABGGTA-220ENST00000560998 TFF1P04155 84 aa11.46□□□□□ -0.58
RABGGTA-220ENST00000560998 IGLC1P0CG04 106 aa11.46□□□□□ -0.58
RABGGTA-220ENST00000560998 USF1P22415 310 aaPredicted RBP11.46□□□□□ -0.58
RABGGTA-220ENST00000560998 PAX2Q02962 417 aa11.46□□□□□ -0.58
RABGGTA-220ENST00000560998 AESQ08117 197 aa11.46□□□□□ -0.58
RABGGTA-220ENST00000560998 MRPL54Q6P161 138 aaKnown RBP11.46□□□□□ -0.58
RABGGTA-220ENST00000560998 ZNF474Q6S9Z5 364 aaPredicted RBP11.46□□□□□ -0.58
RABGGTA-220ENST00000560998 H2BFWTQ7Z2G1 175 aa11.46□□□□□ -0.58
RABGGTA-220ENST00000560998 RBMXL3Q8N7X1 1067 aaKnown RBP11.46□□□□□ -0.58
RABGGTA-220ENST00000560998 ZDHHC16Q969W1 377 aa11.46□□□□□ -0.58
RABGGTA-220ENST00000560998 COQ2Q96H96 371 aa11.46□□□□□ -0.58
RABGGTA-220ENST00000560998 GGTLC1Q9BX51 225 aa11.46□□□□□ -0.58
RABGGTA-220ENST00000560998 CFAP47Q6ZTR5 3102 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 HELTA6NFD8 242 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 OOEPA6NGQ2 149 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 CRYBB3P26998 211 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 S100A7P31151 101 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 NBL1P41271 181 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 HIST1H1AQ02539 215 aaPredicted RBP11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 EIF4EBP1Q13541 118 aaPredicted RBP11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 TNXAQ16473 311 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 MSMPQ1L6U9 139 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 C1orf185Q5T7R7 199 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 GTF2H5Q6ZYL4 71 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 RPRMLQ8N4K4 120 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 NEUROG1Q92886 237 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 GALMQ96C23 342 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 K7EM74 188 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 KLK10O43240 276 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 HBZP02008 142 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 SCGB1A1P11684 91 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 MZT1Q08AG7 82 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 TREML4Q6UXN2 200 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 MGST2Q99735 147 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 SLC25A10Q9UBX3 287 aaPredicted RBP11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 METRNQ9UJH8 293 aa11.45□□□□□ -0.58
RABGGTA-220ENST00000560998 MUC21A0A0G2JKD1 596 aa11.44□□□□□ -0.58
RABGGTA-220ENST00000560998 MUC21A0A140T8X8 626 aa11.44□□□□□ -0.58
RABGGTA-220ENST00000560998 OR4C46A6NHA9 309 aa11.44□□□□□ -0.58
RABGGTA-220ENST00000560998 FAM90A9PA6NNJ1 464 aa11.44□□□□□ -0.58
RABGGTA-220ENST00000560998 G3V4G9 280 aa11.44□□□□□ -0.58
RABGGTA-220ENST00000560998 OR2J3O76001 311 aa11.44□□□□□ -0.58
RABGGTA-220ENST00000560998 TIMM23BQ5SRD1 257 aa11.44□□□□□ -0.58
RABGGTA-220ENST00000560998 MUC21Q5SSG8 566 aa11.44□□□□□ -0.58
RABGGTA-220ENST00000560998 OR2Z1Q8NG97 314 aa11.44□□□□□ -0.58
RABGGTA-220ENST00000560998 LRRC29Q8WV35 223 aa11.44□□□□□ -0.58
RABGGTA-220ENST00000560998 PMCHL2Q9BQD1 86 aa11.44□□□□□ -0.58
RABGGTA-220ENST00000560998 MS4A6AQ9H2W1 248 aa11.44□□□□□ -0.58
RABGGTA-220ENST00000560998 TMEM167BQ9NRX6 74 aa11.44□□□□□ -0.58
RABGGTA-220ENST00000560998 RIF1Q5UIP0 2472 aaKnown RBP11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 ASPMQ8IZT6 3477 aa11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 M0R1B8 84 aa11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 OR7C2O60412 319 aa11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 ZNF816Q0VGE8 651 aaPredicted RBP11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 IBA57Q5T440 356 aaKnown RBP11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 FAM53AQ6NSI3 398 aaPredicted RBP11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 CD177Q8N6Q3 437 aa11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 FER1L6-AS1Q8NA97 138 aa11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 C5orf30Q96GV9 206 aa11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 TNFRSF19Q9NS68 423 aa11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 SPENQ96T58 3664 aaKnown RBP11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 ZFHX2Q9C0A1 2572 aaPredicted RBP11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 AKAP13Q12802 2813 aa11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 SSTR5P35346 364 aa11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 CA7P43166 264 aa11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 SEC11AP67812 179 aa11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 C3orf36Q3SXR2 165 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms