RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 IGKV1-33P01594 117 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 MT-ND6P03923 174 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 NPY1RP25929 384 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 CA7P43166 264 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 CYB561P49447 251 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 SEC11AP67812 179 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 HIST1H1AQ02539 215 aaPredicted RBP5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 KIR2DS3Q14952 304 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 ZNF788Q6ZQV5 615 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 LINC00336Q6ZUF6 198 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 ZNF695Q8IW36 515 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 FAM19A2Q8N3H0 131 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 ZNF525Q8N782 197 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 NT5CQ8TCD5 201 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 AP1S3Q96PC3 154 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 XIRP2A4UGR9 3374 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 CTXND1A0A1B0GTU2 59 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 FAM181BA6NEQ2 426 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 SLC22A20A6NK97 555 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 C11orf94C9JXX5 98 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 LAMTOR5O43504 91 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 CTLA4P16410 223 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 TRIP6Q15654 476 aaKnown RBP5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 NMSQ5H8A3 153 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 LCE2AQ5TA79 106 aaPredicted RBP5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 TEX45Q8NA69 505 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 ZNF114Q8NC26 417 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 OR2K2Q8NGT1 345 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 TMEM74BQ9NUR3 256 aa5.49□□□□□ -1.53
TSPAN3-209ENST00000560715 TEX48A0A1B0GUV7 120 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 H3BRM9 83 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 J3QLI3 93 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 IGKV1D-16P01601 117 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 NTF3P20783 257 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 VDAC1P21796 283 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 REG1BP48304 166 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 BRWD1-AS2P59051 145 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 UBE2G1P62253 170 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 GNB1P62873 340 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 CEACAM21Q3KPI0 293 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 EBLN2Q6P2I7 272 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 MAPKAPK5-AS1Q8N8E1 139 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 ZNF439Q8NDP4 499 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 ZNF502Q8TBZ5 544 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 BLNKQ8WV28 456 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 GPER1Q99527 375 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 HDHD3Q9BSH5 251 aaPredicted RBP5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 PBOV1Q9GZY1 135 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 SS18L2Q9UHA2 77 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 JPT1Q9UK76 154 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 ZNF207O43670 478 aaKnown RBP5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 GPR75O95800 540 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 IGLV3-19P01714 112 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 CRYBB3P26998 211 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 RPL24P83731 157 aaKnown RBP5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 FOXI2Q6ZQN5 318 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 C6orf201Q7Z4U5 140 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 FLVCR1-AS1Q8TAF5 88 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 SSC4DQ8WTU2 575 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 OR2A5Q96R48 311 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 OVOL2Q9BRP0 275 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 SLC25A22Q9H936 323 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 HES4Q9HCC6 221 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 TIMM9Q9Y5J7 89 aa5.48□□□□□ -1.53
TSPAN3-209ENST00000560715 C2CD4DB7Z1M9 353 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 HMGB3O15347 200 aaKnown RBP5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 FRMD6-AS1P0C7T7 363 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 SMIM10L1P0DMW3 83 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 SSTR5P35346 364 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 Q6ZSR6 202 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 VN1R4Q7Z5H5 301 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 OR10AG1Q8NH19 301 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 CCL4L1Q8NHW4 92 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 CT55Q8WUE5 264 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 FLYWCH2Q96CP2 140 aaKnown RBP5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 SMIM10Q96HG1 83 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 SH2D2AQ9NP31 389 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 MRPL16Q9NX20 251 aaKnown RBP5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 KLRF1Q9NZS2 232 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 MSRB1Q9NZV6 116 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 NAT8BQ9UHF3 227 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 C2orf70A6NJV1 201 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 H3BP45 60 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 IFI6P09912 130 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 ZNF823P16415 610 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 SRIP30626 198 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 GPR183P32249 361 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 HBG1P69891 147 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 HBG2P69892 147 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 SSBP2P81877 361 aaPredicted RBP5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 TGFBR3Q03167 851 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 TAL2Q16559 108 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 SPATA12Q7Z6I5 190 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 ANKRD37Q7Z713 158 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 TSTD1Q8NFU3 115 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 C18orf32Q8TCD1 76 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 PHLDA1Q8WV24 401 aaPredicted RBP5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 RNF133Q8WVZ7 376 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 TAF15Q92804 592 aaKnown RBP eCLIP5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 APOBEC3DQ96AK3 386 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms