RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 FGFRL1Q8N441 504 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 SLC25A39Q9BZJ4 359 aaPredicted RBP7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 MBD3L4A6NDZ8 208 aaPredicted RBP7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 MBD3L3A6NE82 208 aaPredicted RBP7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 MBD3L5A6NJ08 208 aaPredicted RBP7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 CTRLP40313 264 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 SPEM2Q0P670 501 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 ZNF141Q15928 474 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 PRSS27Q9BQR3 290 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 FAM60AQ9NP50 221 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 TIMM9Q9Y5J7 89 aa7.53□□□□□ -1.2
GTF2A1-203ENST00000553612 DHRS3O75911 302 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 PRSS2P07478 247 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 RIGQ13278 110 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 TMEM170BQ5T4T1 132 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 MRPL55Q7Z7F7 128 aaKnown RBP7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 NPIPB3Q92617 1050 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 CCL26Q9Y258 94 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 C17orf51A8MQB3 221 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 Q6AWC8 147 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 NTN5Q8WTR8 489 aaPredicted RBP7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 REPIN1Q9BWE0 567 aaKnown RBP7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 MAST2Q6P0Q8 1798 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 TRBV5-7A0A0A0MS05 114 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 WISP3O95389 354 aaPredicted RBP7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 CGAP01215 116 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 PRB1P04280 392 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 FXYD2P54710 66 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 TAL2Q16559 108 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 LHX8Q68G74 356 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 GATD1Q8NB37 220 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 TMEM222Q9H0R3 208 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 UNC13CQ8NB66 2214 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 TAF1LQ8IZX4 1826 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 COL2A1P02458 1487 aaPredicted RBP7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 LINC01549A6NIU2 74 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 PRR32B1ATL7 298 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 PRB3Q04118 309 aaPredicted RBP7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 C2orf82Q6UX34 121 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 MDP1Q86V88 176 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 AGMATQ9BSE5 352 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 RTTNQ86VV8 2226 aa7.52□□□□□ -1.21
GTF2A1-203ENST00000553612 ZG16O60844 167 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 CLDN14O95500 239 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 COX6CP09669 75 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 UCNP55089 124 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 LOXL3P58215 753 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 PCSK4Q6UW60 755 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 DDB2Q92466 427 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 TRAV9-1A0A075B6T8 112 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 TMEM229AB2RXF0 380 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 FSTP19883 344 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 FKBP1AP62942 108 aaKnown RBP7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 ANKRD29Q8N6D5 301 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 PGPA6NDG6 321 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 IGLL5B9A064 214 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 ORM1P02763 201 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 CKS2P33552 79 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 P2RY2P41231 377 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 C4orf26Q17RF5 130 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 C1QL2Q7Z5L3 287 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 OCIAD1Q9NX40 245 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 C21orf62Q9NYP8 219 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 IGHV1-24A0A0C4DH33 117 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 VKORC1L1Q8N0U8 176 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 DEFB126Q9BYW3 111 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 FSCN3Q9NQT6 498 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 LINC00527Q9UJ94 153 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 DDX60LQ5H9U9 1706 aaKnown RBP7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 CD7P09564 240 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 ZNF818PQ6ZRF7 136 aa7.51□□□□□ -1.21
GTF2A1-203ENST00000553612 PDCD6O75340 191 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 RPL11P62913 178 aaKnown RBP7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 AMN1Q8IY45 258 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 CCL4L1Q8NHW4 92 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 FRG2CA6NGY1 282 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 H0YJW9 148 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 H7C1H1 209 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 YPEL3P61236 119 aaPredicted RBP7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 ZNF525Q8N782 197 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 MGST2Q99735 147 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 TMEM167BQ9NRX6 74 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 MPC1Q9Y5U8 109 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 GBF1Q92538 1859 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 UBR1Q8IWV7 1749 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 GCHFRP30047 84 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 VKORC1Q9BQB6 163 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 DEFB108BQ8NET1 73 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 KLF16Q9BXK1 252 aaPredicted RBP7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 RIMBP3CA6NJZ7 1639 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 RIMBP3BA6NNM3 1639 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 RIMBP3Q9UFD9 1639 aa7.5□□□□□ -1.21
GTF2A1-203ENST00000553612 TGFBR3LH3BV60 316 aa7.49□□□□□ -1.21
GTF2A1-203ENST00000553612 EIF4EBP2Q13542 120 aaPredicted RBP7.49□□□□□ -1.21
GTF2A1-203ENST00000553612 TBR1Q16650 682 aa7.49□□□□□ -1.21
GTF2A1-203ENST00000553612 C12orf74Q32Q52 190 aa7.49□□□□□ -1.21
GTF2A1-203ENST00000553612 SPRYD7Q5W111 196 aa7.49□□□□□ -1.21
GTF2A1-203ENST00000553612 RPP25LQ8N5L8 163 aaKnown RBP7.49□□□□□ -1.21
GTF2A1-203ENST00000553612 IGLV3-10A0A075B6K4 115 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms