RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 EVX1P49640 407 aa1.84□□□□□ -2.11
SYNE2-210ENST00000553455 IFITM2Q01629 132 aa1.84□□□□□ -2.11
SYNE2-210ENST00000553455 HIST2H3PS2Q5TEC6 136 aa1.84□□□□□ -2.11
SYNE2-210ENST00000553455 RPP25LQ8N5L8 163 aaKnown RBP1.84□□□□□ -2.11
SYNE2-210ENST00000553455 OR8B12Q8NGG6 310 aa1.84□□□□□ -2.11
SYNE2-210ENST00000553455 ACOT12Q8WYK0 555 aa1.84□□□□□ -2.11
SYNE2-210ENST00000553455 ANKRD7Q92527 254 aa1.84□□□□□ -2.11
SYNE2-210ENST00000553455 ERMAPQ96PL5 475 aaPredicted RBP1.84□□□□□ -2.11
SYNE2-210ENST00000553455 FAM96AQ9H5X1 160 aa1.84□□□□□ -2.11
SYNE2-210ENST00000553455 CLTCL1P53675 1640 aa1.84□□□□□ -2.12
SYNE2-210ENST00000553455 CPAMD8Q8IZJ3 1885 aa1.84□□□□□ -2.12
SYNE2-210ENST00000553455 RGS12O14924 1447 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 YTHDC2Q9H6S0 1430 aaKnown RBP1.83□□□□□ -2.12
SYNE2-210ENST00000553455 XRN1Q8IZH2 1706 aaKnown RBP1.83□□□□□ -2.12
SYNE2-210ENST00000553455 A0A0D9SEW6 157 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 A0A1B0GV50 99 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 ZNF737O75373 536 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 TNNC2P02585 160 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 IFNA16P05015 189 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 ZNF705DP0CH99 300 aaPredicted RBP1.83□□□□□ -2.12
SYNE2-210ENST00000553455 EMP1P54849 157 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 GLT8D1Q68CQ7 371 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 KTN1-AS1Q86SY8 53 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 MNS1Q8NEH6 495 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 IMP4Q96G21 291 aaKnown RBP1.83□□□□□ -2.12
SYNE2-210ENST00000553455 CHST6Q9GZX3 395 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 CMTM6Q9NX76 183 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 UBAP1Q9NZ09 502 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 FUT9Q9Y231 359 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 ADGRB1O14514 1584 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 MYO3BQ8WXR4 1341 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.83□□□□□ -2.12
SYNE2-210ENST00000553455 ANKARQ7Z5J8 1434 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 ADGRL3Q9HAR2 1447 aa1.83□□□□□ -2.12
SYNE2-210ENST00000553455 C1orf167Q5SNV9 1468 aa1.82□□□□□ -2.12
SYNE2-210ENST00000553455 GREB1Q4ZG55 1949 aa1.82□□□□□ -2.12
SYNE2-210ENST00000553455 CDC42BPGQ6DT37 1551 aa1.82□□□□□ -2.12
SYNE2-210ENST00000553455 A0A0J9YY10 115 aa1.82□□□□□ -2.12
SYNE2-210ENST00000553455 A0A1B0GX78 115 aa1.82□□□□□ -2.12
SYNE2-210ENST00000553455 PPBPP02775 128 aa1.82□□□□□ -2.12
SYNE2-210ENST00000553455 GPX1P07203 203 aa1.82□□□□□ -2.12
SYNE2-210ENST00000553455 SERPINA6P08185 405 aa1.82□□□□□ -2.12
SYNE2-210ENST00000553455 MSNP26038 577 aaKnown RBP1.82□□□□□ -2.12
SYNE2-210ENST00000553455 AQP4P55087 323 aa1.82□□□□□ -2.12
SYNE2-210ENST00000553455 SPCS3P61009 180 aa1.82□□□□□ -2.12
SYNE2-210ENST00000553455 TMEM155Q4W5P6 130 aa1.82□□□□□ -2.12
SYNE2-210ENST00000553455 DCXRQ7Z4W1 244 aa1.82□□□□□ -2.12
SYNE2-210ENST00000553455 HSPB9Q9BQS6 159 aa1.82□□□□□ -2.12
SYNE2-210ENST00000553455 DOHHQ9BU89 302 aa1.82□□□□□ -2.12
SYNE2-210ENST00000553455 KNDC1Q76NI1 1749 aa1.82□□□□□ -2.12
SYNE2-210ENST00000553455 CPSF1Q10570 1443 aaKnown RBP1.82□□□□□ -2.12
SYNE2-210ENST00000553455 RALGAPA2Q2PPJ7 1873 aa1.82□□□□□ -2.12
SYNE2-210ENST00000553455 ASXL1Q8IXJ9 1541 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 CR1P17927 2039 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 CUL9Q8IWT3 2517 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 TRBV20OR9-2A0A075B6H5 130 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 SIGLEC16A6NMB1 481 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 TRAPPC2LH3BP13 241 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 SERPINA7P05543 415 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 HAAOP46952 286 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 TMEM42Q69YG0 159 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 COA5Q86WW8 74 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 ZNF676Q8N7Q3 588 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 PPP1R2P1Q96PQ5 205 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 EFCAB1Q9HAE3 211 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 IL36BQ9NZH7 164 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 FLT4P35916 1363 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 EIF3AQ14152 1382 aaKnown RBP1.81□□□□□ -2.12
SYNE2-210ENST00000553455 CCDC88CQ9P219 2028 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 PXDNQ92626 1479 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 CDK12Q9NYV4 1490 aaPredicted RBP1.81□□□□□ -2.12
SYNE2-210ENST00000553455 ADGRB2O60241 1585 aa1.81□□□□□ -2.12
SYNE2-210ENST00000553455 NHSL1Q5SYE7 1610 aa1.8□□□□□ -2.12
SYNE2-210ENST00000553455 SMIM23A6NLE4 172 aa1.8□□□□□ -2.12
SYNE2-210ENST00000553455 HMSDA8MTL9 139 aa1.8□□□□□ -2.12
SYNE2-210ENST00000553455 LYPLA2O95372 231 aa1.8□□□□□ -2.12
SYNE2-210ENST00000553455 C1QAP02745 245 aa1.8□□□□□ -2.12
SYNE2-210ENST00000553455 MSMBP08118 114 aa1.8□□□□□ -2.12
SYNE2-210ENST00000553455 SULT1A1P50225 295 aa1.8□□□□□ -2.12
SYNE2-210ENST00000553455 HIST1H4AP62805 103 aaKnown RBP1.8□□□□□ -2.12
SYNE2-210ENST00000553455 RPL18Q07020 188 aaKnown RBP1.8□□□□□ -2.12
SYNE2-210ENST00000553455 GRK1Q15835 563 aa1.8□□□□□ -2.12
SYNE2-210ENST00000553455 C9orf64Q5T6V5 341 aa1.8□□□□□ -2.12
SYNE2-210ENST00000553455 FAM27BQ5VT28 67 aa1.8□□□□□ -2.12
SYNE2-210ENST00000553455 C8orf4Q9NR00 106 aa1.8□□□□□ -2.12
SYNE2-210ENST00000553455 CPDO75976 1380 aa1.8□□□□□ -2.12
SYNE2-210ENST00000553455 BCL9LQ86UU0 1499 aa1.8□□□□□ -2.12
SYNE2-210ENST00000553455 SHPRHQ149N8 1683 aa1.8□□□□□ -2.12
SYNE2-210ENST00000553455 ROBO1Q9Y6N7 1651 aa1.8□□□□□ -2.12
SYNE2-210ENST00000553455 FMN2Q9NZ56 1722 aa1.8□□□□□ -2.12
SYNE2-210ENST00000553455 GGT3PA6NGU5 568 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 OR51F1A6NGY5 319 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 CHP2O43745 196 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 CIAO1O76071 339 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 IGHV3-7P01780 117 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 PRM2P04554 102 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 SULT1A3P0DMM9 295 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 SULT1A4P0DMN0 295 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 HIST1H1TP22492 207 aaPredicted RBP1.79□□□□□ -2.12
SYNE2-210ENST00000553455 CCL20P78556 96 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms