RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 CENPOQ9BU64 300 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 CSTL1Q9H114 145 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 DCSTAMPQ9H295 470 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 AUNIPQ9H7T9 357 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 DAZ1Q9NQZ3 744 aaKnown RBP4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 NDUFA4L2Q9NRX3 87 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 EHFQ9NZC4 300 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 MRPL36Q9P0J6 103 aaKnown RBP4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 CELA1Q9UNI1 258 aa4.98□□□□□ -1.61
PRPF40B-214ENST00000551320 TRAV25A0A0B4J276 109 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 IGHV4-28A0A0C4DH34 117 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 IGHV7-4-1A0A0J9YVY3 117 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 MARCH11A6NNE9 402 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 DFFBO76075 338 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 MT-CO2P00403 227 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 HPRT1P00492 218 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 IGKV1-39P01597 117 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 IGKV1D-39P04432 117 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 GIG44P09565 113 aaPredicted RBP4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 CTXN2P0C2S0 81 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 HLA-DMAP28067 261 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 PPP5CP53041 499 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 TAS2R31P59538 309 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 LSM3P62310 102 aaKnown RBP4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 ICAM4Q14773 271 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 KLK9Q2XQG4 91 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 LGALS9CQ6DKI2 356 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 TCF24Q7RTU0 167 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 TMEM116Q8NCL8 245 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 ZBTB34Q8NCN2 500 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 OR1L8Q8NGR8 309 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 OR4A5Q8NH83 315 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 GALNT14Q96FL9 552 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 ZNF2Q9BSG1 426 aaPredicted RBP4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 FXYD6Q9H0Q3 95 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 KLK9Q9UKQ9 250 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 APLNQ9ULZ1 77 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 TP53TG1Q9Y2A0 90 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 ETV7Q9Y603 341 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 F11RQ9Y624 299 aaKnown RBP4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 DNAH11Q96DT5 4516 aa4.97□□□□□ -1.61
PRPF40B-214ENST00000551320 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 A0A1B0GU03 582 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 OR4C46A6NHA9 309 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 MPTX1A8MV57 137 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 B5MCH6 92 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 I3L2K1 104 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 NDUFA4O00483 81 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 UBE2CO00762 179 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 SLC22A5O76082 557 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 C4BPBP20851 252 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 GALP22466 123 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 HLA-DMBP28068 263 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 HERV-K104P61576 105 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 NEDD8Q15843 81 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 FAM90A2PQ658T7 463 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 LAMTOR1Q6IAA8 161 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 TOMM20LQ6UXN7 152 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 Q6ZTC4 211 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 OR5AP2Q8NGF4 316 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 VN1R17PQ8TDU5 208 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 GATAD1Q8WUU5 269 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 MARC2Q969Z3 335 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 BSCL2Q96G97 398 aaPredicted RBP4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 MS4A6AQ9H2W1 248 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 RABAC1Q9UI14 185 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 SSR3Q9UNL2 185 aa4.96□□□□□ -1.62
PRPF40B-214ENST00000551320 HSPG2P98160 4391 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 IGLV2-18A0A075B6J9 118 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 TRAV14DV4A0A0A6YYC5 116 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 KIR2DL5BA0A0G2JN68 375 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 KIR2DL5BA0A0G2JPC4 375 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 ERICH4A6NGS2 130 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 M0QYG6 137 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 DNASE2O00115 360 aaPredicted RBP4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 ST8SIA3O43173 380 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 IFNA4P05014 189 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 ZNF688P0C7X2 276 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 PRB4P10163 310 aaPredicted RBP4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 MALP21145 153 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 F2RP25116 425 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 ELLP55199 621 aaPredicted RBP4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 FXYD7P58549 80 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 RAP2BP61225 183 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 ERVK-16P61578 105 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 CATR1Q13166 79 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 POU2AF1Q16633 256 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 UBE2UQ5VVX9 321 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 Q6ZSN1 163 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 KIR2DL5AQ8N109 375 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 Q8NAQ8 132 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 STXBP6Q8NFX7 210 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 TSPAN14Q8NG11 270 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 KIR2DL5BQ8NHK3 375 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 C2CD4CQ8TF44 421 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 LSM10Q969L4 123 aaKnown RBP4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 MRGPRFQ96AM1 343 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 DGCR14Q96DF8 476 aaKnown RBP4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 PLEKHA2Q9HB19 425 aa4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 IFT46Q9NQC8 304 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms