RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CCKARP32238 428 aa11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 ADMP35318 185 aa11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 PRDM13Q9H4Q3 707 aa11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 PPIAL4AQ9Y536 164 aa11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 FAM208BQ5VWN6 2430 aa11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 TEX50A0A1B0GTY4 177 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 WNT2P09544 360 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 Q8N7P7 452 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 OR1L6Q8NGR2 347 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 OR1B1Q8NGR6 318 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 TMEM18Q96B42 140 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 SLC35E1Q96K37 410 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 MS4A10Q96PG2 267 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 F2Z2F3 143 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 COX7A2P2O60397 106 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 DDTP30046 118 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 CAMPP49913 170 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 ERHP84090 104 aaKnown RBP11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 ADIPOQQ15848 244 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 TNXAQ16473 311 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 TOMM20LQ6UXN7 152 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 OR5AU1Q8NGC0 362 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 RITA1Q96K30 269 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 KCNIP2Q9NS61 270 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 IL19Q9UHD0 177 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 TMEM200BQ69YZ2 307 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 CSPG4Q6UVK1 2322 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 COL27A1Q8IZC6 1860 aaPredicted RBP11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 ATG101Q9BSB4 218 aa11.15□□□□□ -0.62
PRPF40B-209ENST00000548825 F2RL2O00254 374 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 GZMBP10144 247 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 GPX4P36969 197 aaPredicted RBP11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 KRTDAPP60985 99 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 RPL8P62917 257 aaKnown RBP11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 GNG5P63218 68 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 TIGITQ495A1 244 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 ZNF705AQ6ZN79 300 aaPredicted RBP11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 TCTEX1D1Q8N7M0 179 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 TMEM242Q9NWH2 141 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 PRNDQ9UKY0 176 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 ZFYVE26Q68DK2 2539 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 C17orf100A8MU93 164 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 TEX38Q6PEX7 206 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 CBLN4Q9NTU7 201 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 RPUSD1Q9UJJ7 312 aaKnown RBP11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 NOTCH3Q9UM47 2321 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 ZNF729A6NN14 1252 aaPredicted RBP11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 K7EN84 100 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 CNTFRP26992 372 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 MAS1LP35410 378 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 CTAG1AP78358 180 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 LRRC10Q5BKY1 277 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 IGFL2Q6UWQ7 119 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 Q6ZS92 163 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 TGIF2LXQ8IUE1 241 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 PAM16Q9Y3D7 125 aa11.14□□□□□ -0.63
PRPF40B-209ENST00000548825 RPL29P47914 159 aaKnown RBP11.13□□□□□ -0.63
PRPF40B-209ENST00000548825 GAL3ST2Q9H3Q3 398 aa11.13□□□□□ -0.63
PRPF40B-209ENST00000548825 HIVEP3Q5T1R4 2406 aa11.13□□□□□ -0.63
PRPF40B-209ENST00000548825 MPDU1O75352 247 aa11.13□□□□□ -0.63
PRPF40B-209ENST00000548825 CRISP2P16562 243 aa11.13□□□□□ -0.63
PRPF40B-209ENST00000548825 ZNF788Q6ZQV5 615 aa11.13□□□□□ -0.63
PRPF40B-209ENST00000548825 MMD2Q8IY49 270 aa11.13□□□□□ -0.63
PRPF40B-209ENST00000548825 FAM57AQ8TBR7 257 aa11.13□□□□□ -0.63
PRPF40B-209ENST00000548825 C1orf159Q96HA4 380 aa11.13□□□□□ -0.63
PRPF40B-209ENST00000548825 MRPL18Q9H0U6 180 aaKnown RBP11.13□□□□□ -0.63
PRPF40B-209ENST00000548825 UPK2O00526 184 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 KRTCAP3Q53RY4 240 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 ZNF664Q8N3J9 261 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 CMTM2Q8TAZ6 248 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 VN1R17PQ8TDU5 208 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 SSUH2Q9Y2M2 353 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 GRNP28799 593 aaKnown RBP11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 KIR2DS2P43631 304 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 CENPVQ7Z7K6 275 aaPredicted RBP11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 SFXN3Q9BWM7 321 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 TMEM14BQ9NUH8 114 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 ACACBO00763 2458 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 LHBP01229 141 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 PAX5Q02548 391 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 C14orf144Q96I85 54 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 HSPB9Q9BQS6 159 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 RAB9BQ9NP90 201 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 ZNF355PQ9NSJ1 428 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 TMEM106BQ9NUM4 274 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 FKBP11Q9NYL4 201 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 TECRQ9NZ01 308 aaKnown RBP11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 SLC45A2Q9UMX9 530 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 HILPDAQ9Y5L2 63 aa11.12□□□□□ -0.63
PRPF40B-209ENST00000548825 DOPEY2Q9Y3R5 2298 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 G0S2P27469 103 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 HES1Q14469 280 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 DDB2Q92466 427 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 TPPP3Q9BW30 176 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 ATOH7Q8N100 152 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 FAM19A2Q8N3H0 131 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 OR1L8Q8NGR8 309 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 ZNF430Q9H8G1 570 aaPredicted RBP11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 ONECUT1Q9UBC0 465 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 IGLV3-9A0A075B6K5 115 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms