RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 EXOSC2Q13868 293 aaKnown RBP10.88□□□□□ -0.67
LTBR-209ENST00000541102 KLF5Q13887 457 aaPredicted RBP10.88□□□□□ -0.67
LTBR-209ENST00000541102 KLK9Q2XQG4 91 aa10.88□□□□□ -0.67
LTBR-209ENST00000541102 UXS1Q8NBZ7 420 aa10.88□□□□□ -0.67
LTBR-209ENST00000541102 OR10C1Q96KK4 312 aa10.88□□□□□ -0.67
LTBR-209ENST00000541102 ASCL2Q99929 193 aa10.88□□□□□ -0.67
LTBR-209ENST00000541102 PALMDQ9NP74 551 aa10.88□□□□□ -0.67
LTBR-209ENST00000541102 KLK9Q9UKQ9 250 aa10.88□□□□□ -0.67
LTBR-209ENST00000541102 TMED3Q9Y3Q3 217 aa10.88□□□□□ -0.67
LTBR-209ENST00000541102 IGHV3-21A0A0B4J1V1 117 aa10.87□□□□□ -0.67
LTBR-209ENST00000541102 FAM223BA6NKX1 122 aa10.87□□□□□ -0.67
LTBR-209ENST00000541102 SPCS3P61009 180 aa10.87□□□□□ -0.67
LTBR-209ENST00000541102 TNFRSF9Q07011 255 aa10.87□□□□□ -0.67
LTBR-209ENST00000541102 TATDN3Q17R31 274 aa10.87□□□□□ -0.67
LTBR-209ENST00000541102 RPEL1Q2QD12 228 aa10.87□□□□□ -0.67
LTBR-209ENST00000541102 FAM223AQ8IWN6 122 aa10.87□□□□□ -0.67
LTBR-209ENST00000541102 C12orf45Q8N5I9 185 aaPredicted RBP10.87□□□□□ -0.67
LTBR-209ENST00000541102 NECAP1Q8NC96 275 aa10.87□□□□□ -0.67
LTBR-209ENST00000541102 OR52E5Q8NH55 327 aa10.87□□□□□ -0.67
LTBR-209ENST00000541102 OR1S1Q8NH92 325 aa10.87□□□□□ -0.67
LTBR-209ENST00000541102 RBKSQ9H477 322 aa10.87□□□□□ -0.67
LTBR-209ENST00000541102 PLEKHA3Q9HB20 300 aa10.87□□□□□ -0.67
LTBR-209ENST00000541102 HSPB7Q9UBY9 170 aa10.87□□□□□ -0.67
LTBR-209ENST00000541102 FBXL7Q9UJT9 491 aa10.87□□□□□ -0.67
LTBR-209ENST00000541102 F11RQ9Y624 299 aaKnown RBP10.87□□□□□ -0.67
LTBR-209ENST00000541102 MFSD2BA6NFX1 497 aa10.86□□□□□ -0.67
LTBR-209ENST00000541102 PTTG1O95997 202 aa10.86□□□□□ -0.67
LTBR-209ENST00000541102 RNASE2P10153 161 aaKnown RBP10.86□□□□□ -0.67
LTBR-209ENST00000541102 DEFA4P12838 97 aa10.86□□□□□ -0.67
LTBR-209ENST00000541102 GP9P14770 177 aa10.86□□□□□ -0.67
LTBR-209ENST00000541102 HOXA1P49639 335 aaPredicted RBP10.86□□□□□ -0.67
LTBR-209ENST00000541102 C15orf32Q32M92 178 aa10.86□□□□□ -0.67
LTBR-209ENST00000541102 THOC7Q6I9Y2 204 aaKnown RBP10.86□□□□□ -0.67
LTBR-209ENST00000541102 OR9G4Q8NGQ1 327 aa10.86□□□□□ -0.67
LTBR-209ENST00000541102 TMEM170AQ8WVE7 144 aa10.86□□□□□ -0.67
LTBR-209ENST00000541102 MAGT1Q9H0U3 335 aa10.86□□□□□ -0.67
LTBR-209ENST00000541102 SMAD5-AS1Q9Y6J3 95 aa10.86□□□□□ -0.67
LTBR-209ENST00000541102 CEBPZOSA8MTT3 80 aa10.85□□□□□ -0.67
LTBR-209ENST00000541102 INS-IGF2F8WCM5 200 aa10.85□□□□□ -0.67
LTBR-209ENST00000541102 SLC25A6P12236 298 aa10.85□□□□□ -0.67
LTBR-209ENST00000541102 SLC25A24Q6NUK1 477 aa10.85□□□□□ -0.67
LTBR-209ENST00000541102 HSD17B13Q7Z5P4 300 aaPredicted RBP10.85□□□□□ -0.67
LTBR-209ENST00000541102 OR4D5Q8NGN0 318 aa10.85□□□□□ -0.67
LTBR-209ENST00000541102 CCDC140Q96MF4 163 aa10.85□□□□□ -0.67
LTBR-209ENST00000541102 PDCD10Q9BUL8 212 aa10.85□□□□□ -0.67
LTBR-209ENST00000541102 DNAH9Q9NYC9 4486 aa10.84□□□□□ -0.67
LTBR-209ENST00000541102 K7EIM0 57 aa10.84□□□□□ -0.67
LTBR-209ENST00000541102 BMPR1BO00238 502 aa10.84□□□□□ -0.67
LTBR-209ENST00000541102 SIX6O95475 246 aa10.84□□□□□ -0.67
LTBR-209ENST00000541102 DHFRP00374 187 aa10.84□□□□□ -0.67
LTBR-209ENST00000541102 IGLV1-51P01701 117 aa10.84□□□□□ -0.67
LTBR-209ENST00000541102 IGHV3-48P01763 117 aa10.84□□□□□ -0.67
LTBR-209ENST00000541102 IAPPP10997 89 aa10.84□□□□□ -0.67
LTBR-209ENST00000541102 MLANAQ16655 118 aa10.84□□□□□ -0.67
LTBR-209ENST00000541102 BSXQ3C1V8 233 aa10.84□□□□□ -0.67
LTBR-209ENST00000541102 PVRIGQ6DKI7 326 aa10.84□□□□□ -0.67
LTBR-209ENST00000541102 IL34Q6ZMJ4 242 aa10.84□□□□□ -0.67
LTBR-209ENST00000541102 ZNF114Q8NC26 417 aa10.84□□□□□ -0.67
LTBR-209ENST00000541102 OR1P1Q8NH06 330 aa10.84□□□□□ -0.67
LTBR-209ENST00000541102 WDR89Q96FK6 387 aaPredicted RBP10.84□□□□□ -0.67
LTBR-209ENST00000541102 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.83□□□□□ -0.68
LTBR-209ENST00000541102 FAM25EA8MYX2 175 aa10.83□□□□□ -0.68
LTBR-209ENST00000541102 PPP5D1E7EU14 171 aa10.83□□□□□ -0.68
LTBR-209ENST00000541102 F8W735 103 aaPredicted RBP10.83□□□□□ -0.68
LTBR-209ENST00000541102 IFNA21P01568 189 aa10.83□□□□□ -0.68
LTBR-209ENST00000541102 NHLRC4P0CG21 123 aaPredicted RBP10.83□□□□□ -0.68
LTBR-209ENST00000541102 ERHP84090 104 aaKnown RBP10.83□□□□□ -0.68
LTBR-209ENST00000541102 ID3Q02535 119 aa10.83□□□□□ -0.68
LTBR-209ENST00000541102 IAH1Q2TAA2 248 aaPredicted RBP10.83□□□□□ -0.68
LTBR-209ENST00000541102 ZBTB8BQ8NAP8 495 aaPredicted RBP10.83□□□□□ -0.68
LTBR-209ENST00000541102 DTD1Q8TEA8 209 aa10.83□□□□□ -0.68
LTBR-209ENST00000541102 MISP3Q96FF7 219 aa10.83□□□□□ -0.68
LTBR-209ENST00000541102 GPN1Q9HCN4 374 aaPredicted RBP10.83□□□□□ -0.68
LTBR-209ENST00000541102 HEYLQ9NQ87 328 aaPredicted RBP10.83□□□□□ -0.68
LTBR-209ENST00000541102 GSKIPQ9P0R6 139 aa10.83□□□□□ -0.68
LTBR-209ENST00000541102 ALG5Q9Y673 324 aa10.83□□□□□ -0.68
LTBR-209ENST00000541102 C7orf66A4D0T2 115 aa10.82□□□□□ -0.68
LTBR-209ENST00000541102 SNRPGP15A8MWD9 76 aa10.82□□□□□ -0.68
LTBR-209ENST00000541102 I3L2K1 104 aa10.82□□□□□ -0.68
LTBR-209ENST00000541102 PRAF2O60831 178 aa10.82□□□□□ -0.68
LTBR-209ENST00000541102 OR2C1O95371 312 aa10.82□□□□□ -0.68
LTBR-209ENST00000541102 TMEM50AO95807 157 aa10.82□□□□□ -0.68
LTBR-209ENST00000541102 CSN3P07498 182 aa10.82□□□□□ -0.68
LTBR-209ENST00000541102 HIST1H1BP16401 226 aaKnown RBP10.82□□□□□ -0.68
LTBR-209ENST00000541102 POLR2GP62487 172 aaKnown RBP eCLIP10.82□□□□□ -0.68
LTBR-209ENST00000541102 OXA1LQ15070 435 aa10.82□□□□□ -0.68
LTBR-209ENST00000541102 RGS21Q2M5E4 152 aa10.82□□□□□ -0.68
LTBR-209ENST00000541102 CLEC19AQ6UXS0 136 aa10.82□□□□□ -0.68
LTBR-209ENST00000541102 FNDC4Q9H6D8 234 aaPredicted RBP10.82□□□□□ -0.68
LTBR-209ENST00000541102 ENY2Q9NPA8 101 aa10.82□□□□□ -0.68
LTBR-209ENST00000541102 ZC4H2Q9NQZ6 224 aa10.82□□□□□ -0.68
LTBR-209ENST00000541102 MRPL36Q9P0J6 103 aaKnown RBP10.82□□□□□ -0.68
LTBR-209ENST00000541102 PEMTQ9UBM1 199 aa10.82□□□□□ -0.68
LTBR-209ENST00000541102 COL7A1Q02388 2944 aa10.81□□□□□ -0.68
LTBR-209ENST00000541102 PIGBOS1A0A0B4J2F0 54 aa10.81□□□□□ -0.68
LTBR-209ENST00000541102 C5orf51A6NDU8 294 aa10.81□□□□□ -0.68
LTBR-209ENST00000541102 GGCTO75223 188 aaKnown RBP10.81□□□□□ -0.68
LTBR-209ENST00000541102 MT-CO2P00403 227 aa10.81□□□□□ -0.68
LTBR-209ENST00000541102 MBPP02686 304 aaPredicted RBP10.81□□□□□ -0.68
LTBR-209ENST00000541102 SNCAP37840 140 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms