RNA–Protein interactions for RNA: ENST00000537724.1

AC055720.2-201, humanhuman

TSL 3 BASIC

Gene AC055720.2, Length 172 nt, Biotype 3prime overlapping ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.2-201ENST00000537724 KDM5CP41229 1560 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 IGLV1-50A0A075B6I6 118 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 IGHV1OR15-9A0A0B4J2B8 117 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 A0A0J9YXY3 114 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 EPM2AB3EWF7 344 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 M0R378 163 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 BMPR1BO00238 502 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 TNFP01375 233 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 IGKV1-5P01602 117 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 IGHV3-11P01762 117 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 PATE4P0C8F1 98 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 CRISP2P16562 243 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 CRHBPP24387 322 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 ZNF80P51504 273 aaPredicted RBP3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 AQP4P55087 323 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 GNB1P62873 340 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 CCL20P78556 96 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 PLGLB1Q02325 96 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 PDGFRLQ15198 375 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 SPANXN3Q5MJ09 141 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 RPL22L1Q6P5R6 122 aaKnown RBP3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 LCN15Q6UWW0 184 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 SCXQ7RTU7 201 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 PHF5AQ7RTV0 110 aaKnown RBP3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 CAMK2N1Q7Z7J9 78 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 SLC25A42Q86VD7 318 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 GKN2Q86XP6 184 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 ZNF645Q8N7E2 425 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 APCDD1LQ8NCL9 501 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 PLPP5Q8NEB5 264 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 NAT14Q8WUY8 206 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 LCN9Q8WX39 176 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 SLC25A46Q96AG3 418 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 RMI2Q96E14 147 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 VSIG2Q96IQ7 327 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 CAMK2N2Q96S95 79 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 PYGO2Q9BRQ0 406 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 CHAC1Q9BUX1 264 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 RPRMQ9NS64 109 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 SNX12Q9UMY4 172 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 PDS5BQ9NTI5 1447 aa3.1□□□□□ -1.91
AC055720.2-201ENST00000537724 ANKRD31Q8N7Z5 1873 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 NOTCH3Q9UM47 2321 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 A0A087X002 238 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 A0A0D9SEW6 157 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 ZNF727A8MUV8 499 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 SRRM5B3KS81 715 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 H3BQF6 201 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 C19orf84I3L1E1 186 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 SOCS3O14543 225 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 SOCS1O15524 211 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 OR2T1O43869 369 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 IGKV1-39P01597 117 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 IGHV3-13P01766 116 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 IGKV1D-39P04432 117 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 HIST1H2BOP23527 126 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 HIST1H2BBP33778 126 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 TGFBR1P36897 503 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 FOXA3P55318 350 aaPredicted RBP3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 RBM11P57052 281 aaKnown RBP3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 LINC01547P58512 204 aaPredicted RBP3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 HIST1H2BDP58876 126 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 HIST1H2BCP62807 126 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 HIST2H2BEQ16778 126 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 SP6Q3SY56 376 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 MPV17L2Q567V2 206 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 AMTNQ6UX39 209 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 FOXI2Q6ZQN5 318 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 RPS19BP1Q86WX3 136 aaKnown RBP3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 OR5D14Q8NGL3 314 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 DCANP1Q8TF63 244 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 TMEM158Q8WZ71 300 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 HIST1H2BHQ93079 126 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 ELSPBP1Q96BH3 223 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 HIST1H2BNQ99877 126 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 HIST1H2BMQ99879 126 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 TBL1YQ9BQ87 522 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 HDHD3Q9BSH5 251 aaPredicted RBP3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 ZNF286AQ9HBT8 521 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 TAS2R8Q9NYW2 309 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 TP73-AS1Q9UF72 201 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 RNF11Q9Y3C5 154 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 DSPPQ9NZW4 1301 aa3.09□□□□□ -1.91
AC055720.2-201ENST00000537724 CPSF1Q10570 1443 aaKnown RBP3.09□□□□□ -1.92
AC055720.2-201ENST00000537724 NCKAP5O14513 1909 aa3.09□□□□□ -1.92
AC055720.2-201ENST00000537724 ZNF638Q14966 1978 aaKnown RBP3.09□□□□□ -1.92
AC055720.2-201ENST00000537724 PIK3C2AO00443 1686 aa3.08□□□□□ -1.92
AC055720.2-201ENST00000537724 QRICH2Q9H0J4 1663 aa3.08□□□□□ -1.92
AC055720.2-201ENST00000537724 IGKV1-6A0A0C4DH72 117 aa3.08□□□□□ -1.92
AC055720.2-201ENST00000537724 SMIM31A0A1B0GVY4 71 aa3.08□□□□□ -1.92
AC055720.2-201ENST00000537724 ZNF860A6NHJ4 632 aa3.08□□□□□ -1.92
AC055720.2-201ENST00000537724 BBIP1A8MTZ0 92 aa3.08□□□□□ -1.92
AC055720.2-201ENST00000537724 FNDC10F2Z333 226 aa3.08□□□□□ -1.92
AC055720.2-201ENST00000537724 UBFD1O14562 309 aaKnown RBP3.08□□□□□ -1.92
AC055720.2-201ENST00000537724 PHOX2AO14813 284 aa3.08□□□□□ -1.92
AC055720.2-201ENST00000537724 SCO1O75880 301 aa3.08□□□□□ -1.92
AC055720.2-201ENST00000537724 CST7O76096 145 aa3.08□□□□□ -1.92
AC055720.2-201ENST00000537724 MPC2O95563 127 aa3.08□□□□□ -1.92
AC055720.2-201ENST00000537724 SOD1P00441 154 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms