RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 TGOLN2O43493 480 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 GNG7O60262 68 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 NXPH3O95157 252 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 IFNA10P01566 189 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 TRBV12-3P01733 135 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 TCRBP04435 133 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 CLEC3BP05452 202 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 HOXB5P09067 269 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 OR4E1P0C645 316 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 SLC25A6P12236 298 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 ANXA7P20073 488 aaKnown RBP4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 NPY1RP25929 384 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 OPRK1P41145 380 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 NPBWR1P48145 328 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 MFAP4P55083 255 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 RPP30P78346 268 aaKnown RBP4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 RELQ04864 619 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 TNFRSF9Q07011 255 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 DHRS2Q13268 280 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 ASAH1Q13510 395 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 KLF5Q13887 457 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 KLK9Q2XQG4 91 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 ANKRD55Q3KP44 614 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 AARDQ4LEZ3 155 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 NMSQ5H8A3 153 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 ETFRF1Q6IPR1 90 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 LCN12Q6JVE5 192 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 ACSM6Q6P461 480 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 LYZL2Q7Z4W2 148 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 LRTM2Q8N967 370 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 DUSP18Q8NEJ0 188 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 SLC24A4Q8NFF2 622 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 ZNF502Q8TBZ5 544 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 MRAPQ8TCY5 172 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 DTD1Q8TEA8 209 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 CCDC140Q96MF4 163 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 CIB3Q96Q77 187 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 TXN2Q99757 166 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 NUDT15Q9NV35 164 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 KLK9Q9UKQ9 250 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 UFC1Q9Y3C8 167 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 S4R3C0 116 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 TRAV6A0A075B6T7 132 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 IGHV3-21A0A0B4J1V1 117 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 FAM90A26D6RGX4 464 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 K7EIM0 57 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 LGALS9O00182 355 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 PLA2G10O15496 165 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 WIPF1O43516 503 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 YIF1AO95070 293 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 OR2C1O95371 312 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 MT-CO2P00403 227 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 IFNA4P05014 189 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 H2AFB2P0C5Z0 115 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 RNASE2P10153 161 aaKnown RBP4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 BTCP35070 178 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 BMI1P35226 326 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 ATP5IP56385 69 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 RAB11AP62491 216 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 EGFEM1PQ0D2K5 195 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 PDLIM3Q53GG5 364 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 GGNBP1Q5YKI7 109 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 Q6ZRM9 215 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 GTSCR1Q86UQ5 136 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 GPHB5Q86YW7 130 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 OR2K2Q8NGT1 345 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 RNASEH2CQ8TDP1 164 aaKnown RBP4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 SCARB1Q8WTV0 552 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 MARC2Q969Z3 335 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 RBKSQ9H477 322 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 GPN1Q9HCN4 374 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 ZC4H2Q9NQZ6 224 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 AURKAIP1Q9NWT8 199 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 HSPB7Q9UBY9 170 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 PAIP2BQ9ULR5 123 aaKnown RBP4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 FLVCR2Q9UPI3 526 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 ZNF256Q9Y2P7 627 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 U3KQ87 197 aa4.14□□□□□ -1.75
HMGB1P40-201ENST00000525121 TRAV30A0A087WSZ9 112 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 IGHV3-35A0A0C4DH35 117 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 A8MWP6 167 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 FAM25EA8MYX2 175 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 I3L2K1 104 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 NDUFA4O00483 81 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 SCGB1D2O95969 90 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 PRB2P02812 416 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 FABP1P07148 127 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 SLC25A4P12235 298 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 FCGR2BP31994 310 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 MFAP2P55001 183 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 ELLP55199 621 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 IAH1Q2TAA2 248 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 C2orf83Q53S99 150 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 DEFB121Q5J5C9 76 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 UXS1Q8NBZ7 420 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 ZNF431Q8TF32 576 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 MITD1Q8WV92 249 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 NARS2Q96I59 477 aaKnown RBP4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 SLC35E1Q96K37 410 aa4.13□□□□□ -1.75
HMGB1P40-201ENST00000525121 GINS3Q9BRX5 216 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms