RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 RFX2P48378 723 aa10.9□□□□□ -0.66
PRKDC-204ENST00000521331 OR5H2Q8NGV7 314 aa10.9□□□□□ -0.66
PRKDC-204ENST00000521331 S100A16Q96FQ6 103 aaKnown RBP10.9□□□□□ -0.66
PRKDC-204ENST00000521331 RNF167Q9H6Y7 350 aa10.9□□□□□ -0.66
PRKDC-204ENST00000521331 FAM212BQ9NTI7 297 aaPredicted RBP10.9□□□□□ -0.66
PRKDC-204ENST00000521331 HERC2O95714 4834 aa10.9□□□□□ -0.66
PRKDC-204ENST00000521331 DBX1A6NMT0 343 aa10.89□□□□□ -0.67
PRKDC-204ENST00000521331 GNG7O60262 68 aa10.89□□□□□ -0.67
PRKDC-204ENST00000521331 DFFBO76075 338 aa10.89□□□□□ -0.67
PRKDC-204ENST00000521331 MT-CO2P00403 227 aa10.89□□□□□ -0.67
PRKDC-204ENST00000521331 PMP2P02689 132 aa10.89□□□□□ -0.67
PRKDC-204ENST00000521331 S100GP29377 79 aa10.89□□□□□ -0.67
PRKDC-204ENST00000521331 TMEM187Q14656 261 aa10.89□□□□□ -0.67
PRKDC-204ENST00000521331 Q6ZNX1 250 aa10.89□□□□□ -0.67
PRKDC-204ENST00000521331 TCF24Q7RTU0 167 aa10.89□□□□□ -0.67
PRKDC-204ENST00000521331 GBGT1Q8N5D6 347 aa10.89□□□□□ -0.67
PRKDC-204ENST00000521331 ZNF114Q8NC26 417 aa10.89□□□□□ -0.67
PRKDC-204ENST00000521331 OR6F1Q8NGZ6 308 aa10.89□□□□□ -0.67
PRKDC-204ENST00000521331 FXYD6Q9H0Q3 95 aa10.89□□□□□ -0.67
PRKDC-204ENST00000521331 TRAV2A0A0B4J234 112 aa10.88□□□□□ -0.67
PRKDC-204ENST00000521331 C11orf94C9JXX5 98 aa10.88□□□□□ -0.67
PRKDC-204ENST00000521331 NAT1P18440 290 aa10.88□□□□□ -0.67
PRKDC-204ENST00000521331 PRR20EP86478 221 aa10.88□□□□□ -0.67
PRKDC-204ENST00000521331 PRR20CP86479 221 aa10.88□□□□□ -0.67
PRKDC-204ENST00000521331 PRR20DP86480 221 aa10.88□□□□□ -0.67
PRKDC-204ENST00000521331 PRR20BP86481 221 aa10.88□□□□□ -0.67
PRKDC-204ENST00000521331 PRR20AP86496 221 aa10.88□□□□□ -0.67
PRKDC-204ENST00000521331 PRCDQ00LT1 54 aa10.88□□□□□ -0.67
PRKDC-204ENST00000521331 LPCAT3Q6P1A2 487 aa10.88□□□□□ -0.67
PRKDC-204ENST00000521331 OR4A16Q8NH70 328 aa10.88□□□□□ -0.67
PRKDC-204ENST00000521331 IGHV3OR16-13A0A075B7E8 117 aa10.87□□□□□ -0.67
PRKDC-204ENST00000521331 IGHV3-74A0A0B4J1X5 117 aa10.87□□□□□ -0.67
PRKDC-204ENST00000521331 DNASE2O00115 360 aaPredicted RBP10.87□□□□□ -0.67
PRKDC-204ENST00000521331 ST8SIA3O43173 380 aa10.87□□□□□ -0.67
PRKDC-204ENST00000521331 UBE2NLQ5JXB2 153 aa10.87□□□□□ -0.67
PRKDC-204ENST00000521331 TMEM69Q5SWH9 247 aa10.87□□□□□ -0.67
PRKDC-204ENST00000521331 H2BFWTQ7Z2G1 175 aa10.87□□□□□ -0.67
PRKDC-204ENST00000521331 DUSP18Q8NEJ0 188 aa10.87□□□□□ -0.67
PRKDC-204ENST00000521331 PINX1Q96BK5 328 aaKnown RBP10.87□□□□□ -0.67
PRKDC-204ENST00000521331 SEC22AQ96IW7 307 aa10.87□□□□□ -0.67
PRKDC-204ENST00000521331 MS4A6AQ9H2W1 248 aa10.87□□□□□ -0.67
PRKDC-204ENST00000521331 HRH4Q9H3N8 390 aa10.87□□□□□ -0.67
PRKDC-204ENST00000521331 VSIRQ9H7M9 311 aa10.87□□□□□ -0.67
PRKDC-204ENST00000521331 DEFB4AO15263 64 aa10.86□□□□□ -0.67
PRKDC-204ENST00000521331 NPBWR1P48145 328 aa10.86□□□□□ -0.67
PRKDC-204ENST00000521331 TAS2R20P59543 309 aa10.86□□□□□ -0.67
PRKDC-204ENST00000521331 DEFB131AP59861 70 aa10.86□□□□□ -0.67
PRKDC-204ENST00000521331 ERHP84090 104 aaKnown RBP10.86□□□□□ -0.67
PRKDC-204ENST00000521331 PHLDA2Q53GA4 152 aa10.86□□□□□ -0.67
PRKDC-204ENST00000521331 TMEM41BQ5BJD5 291 aa10.86□□□□□ -0.67
PRKDC-204ENST00000521331 TOMM20LQ6UXN7 152 aa10.86□□□□□ -0.67
PRKDC-204ENST00000521331 LINC00299Q6ZSB3 139 aa10.86□□□□□ -0.67
PRKDC-204ENST00000521331 GPR141Q7Z602 305 aa10.86□□□□□ -0.67
PRKDC-204ENST00000521331 STHQ8IWL8 128 aa10.86□□□□□ -0.67
PRKDC-204ENST00000521331 ST8SIA2Q92186 375 aa10.86□□□□□ -0.67
PRKDC-204ENST00000521331 TMEM231Q9H6L2 316 aa10.86□□□□□ -0.67
PRKDC-204ENST00000521331 IGLL5B9A064 214 aa10.85□□□□□ -0.67
PRKDC-204ENST00000521331 IGHV3-48P01763 117 aa10.85□□□□□ -0.67
PRKDC-204ENST00000521331 PRSS3P35030 304 aa10.85□□□□□ -0.67
PRKDC-204ENST00000521331 HRH1P35367 487 aa10.85□□□□□ -0.67
PRKDC-204ENST00000521331 HSPE1P61604 102 aaKnown RBP10.85□□□□□ -0.67
PRKDC-204ENST00000521331 RPL11P62913 178 aaKnown RBP10.85□□□□□ -0.67
PRKDC-204ENST00000521331 LEMD1Q68G75 181 aa10.85□□□□□ -0.67
PRKDC-204ENST00000521331 ZNF600Q6ZNG1 722 aa10.85□□□□□ -0.67
PRKDC-204ENST00000521331 TBC1D26Q86UD7 250 aa10.85□□□□□ -0.67
PRKDC-204ENST00000521331 APLNQ9ULZ1 77 aa10.85□□□□□ -0.67
PRKDC-204ENST00000521331 CCDC160A6NGH7 325 aa10.84□□□□□ -0.67
PRKDC-204ENST00000521331 APOHP02749 345 aaPredicted RBP10.84□□□□□ -0.67
PRKDC-204ENST00000521331 HLA-DMAP28067 261 aa10.84□□□□□ -0.67
PRKDC-204ENST00000521331 TMBIM6P55061 237 aa10.84□□□□□ -0.67
PRKDC-204ENST00000521331 TSPAN5P62079 268 aa10.84□□□□□ -0.67
PRKDC-204ENST00000521331 SAMD12Q8N8I0 201 aa10.84□□□□□ -0.67
PRKDC-204ENST00000521331 Q8NAQ8 132 aa10.84□□□□□ -0.67
PRKDC-204ENST00000521331 PUS1Q9Y606 427 aaKnown RBP eCLIP10.84□□□□□ -0.67
PRKDC-204ENST00000521331 VPS13DQ5THJ4 4388 aa10.84□□□□□ -0.67
PRKDC-204ENST00000521331 A0A1W2PS18 150 aa10.83□□□□□ -0.68
PRKDC-204ENST00000521331 IGKV1-39P01597 117 aa10.83□□□□□ -0.68
PRKDC-204ENST00000521331 IGKV1D-39P04432 117 aa10.83□□□□□ -0.68
PRKDC-204ENST00000521331 SPP1P10451 314 aa10.83□□□□□ -0.68
PRKDC-204ENST00000521331 MIFP14174 115 aa10.83□□□□□ -0.68
PRKDC-204ENST00000521331 LYSMD2Q8IV50 215 aa10.83□□□□□ -0.68
PRKDC-204ENST00000521331 CENPSQ8N2Z9 138 aa10.83□□□□□ -0.68
PRKDC-204ENST00000521331 LILRB2Q8N423 598 aa10.83□□□□□ -0.68
PRKDC-204ENST00000521331 MRGPRFQ96AM1 343 aa10.83□□□□□ -0.68
PRKDC-204ENST00000521331 ZFAND3Q9H8U3 227 aa10.83□□□□□ -0.68
PRKDC-204ENST00000521331 RABAC1Q9UI14 185 aa10.83□□□□□ -0.68
PRKDC-204ENST00000521331 IGHV4-28A0A0C4DH34 117 aa10.82□□□□□ -0.68
PRKDC-204ENST00000521331 IGHV3-66A0A0C4DH42 116 aa10.82□□□□□ -0.68
PRKDC-204ENST00000521331 SNCAP37840 140 aa10.82□□□□□ -0.68
PRKDC-204ENST00000521331 UCP3P55916 312 aa10.82□□□□□ -0.68
PRKDC-204ENST00000521331 NEDD8Q15843 81 aa10.82□□□□□ -0.68
PRKDC-204ENST00000521331 MORN3Q6PF18 240 aaPredicted RBP10.82□□□□□ -0.68
PRKDC-204ENST00000521331 FAM24BQ8N5W8 94 aa10.82□□□□□ -0.68
PRKDC-204ENST00000521331 GRAMD2BQ96HH9 432 aa10.82□□□□□ -0.68
PRKDC-204ENST00000521331 BCL7BQ9BQE9 202 aa10.82□□□□□ -0.68
PRKDC-204ENST00000521331 TRAV10A0A0B4J240 114 aa10.81□□□□□ -0.68
PRKDC-204ENST00000521331 INS-IGF2F8WCM5 200 aa10.81□□□□□ -0.68
PRKDC-204ENST00000521331 H3BMQ9 156 aa10.81□□□□□ -0.68
PRKDC-204ENST00000521331 CORTO00230 105 aa10.81□□□□□ -0.68
PRKDC-204ENST00000521331 SCGB2A1O75556 95 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms