RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 EDA2RQ9HAV5 297 aa12.78□□□□□ -0.36
SQLE-205ENST00000521232 DAZ1Q9NQZ3 744 aaKnown RBP12.78□□□□□ -0.36
SQLE-205ENST00000521232 STARD9Q9P2P6 4700 aa12.77□□□□□ -0.36
SQLE-205ENST00000521232 ST8SIA3O43173 380 aa12.77□□□□□ -0.37
SQLE-205ENST00000521232 GSTZ1O43708 216 aaPredicted RBP12.77□□□□□ -0.37
SQLE-205ENST00000521232 SCAF4O95104 1147 aaKnown RBP12.77□□□□□ -0.37
SQLE-205ENST00000521232 CDS2O95674 445 aa12.77□□□□□ -0.37
SQLE-205ENST00000521232 AKR1C2P52895 323 aa12.77□□□□□ -0.37
SQLE-205ENST00000521232 MFAP4P55083 255 aa12.77□□□□□ -0.37
SQLE-205ENST00000521232 TRIM16LQ309B1 348 aa12.77□□□□□ -0.37
SQLE-205ENST00000521232 CASC10Q5T4H9 136 aa12.77□□□□□ -0.37
SQLE-205ENST00000521232 RBPMS2Q6ZRY4 209 aaKnown RBP12.77□□□□□ -0.37
SQLE-205ENST00000521232 OR52B4Q8NGK2 314 aa12.77□□□□□ -0.37
SQLE-205ENST00000521232 OR4C16Q8NGL9 310 aa12.77□□□□□ -0.37
SQLE-205ENST00000521232 ISOC1Q96CN7 298 aa12.77□□□□□ -0.37
SQLE-205ENST00000521232 ZNF414Q96IQ9 312 aa12.77□□□□□ -0.37
SQLE-205ENST00000521232 SOSTQ9BQB4 213 aa12.77□□□□□ -0.37
SQLE-205ENST00000521232 C6orf62Q9GZU0 229 aaPredicted RBP12.77□□□□□ -0.37
SQLE-205ENST00000521232 NXF2Q9GZY0 626 aaKnown RBP12.77□□□□□ -0.37
SQLE-205ENST00000521232 SRD5A3Q9H8P0 318 aa12.77□□□□□ -0.37
SQLE-205ENST00000521232 GPR132Q9UNW8 380 aa12.77□□□□□ -0.37
SQLE-205ENST00000521232 SACSQ9NZJ4 4579 aa12.76□□□□□ -0.37
SQLE-205ENST00000521232 ANKRD20A5PA0PJZ0 165 aa12.76□□□□□ -0.37
SQLE-205ENST00000521232 NOL3O60936 208 aaKnown RBP12.76□□□□□ -0.37
SQLE-205ENST00000521232 MT-CO2P00403 227 aa12.76□□□□□ -0.37
SQLE-205ENST00000521232 PVRIGQ6DKI7 326 aa12.76□□□□□ -0.37
SQLE-205ENST00000521232 GLYATL2Q8WU03 294 aa12.76□□□□□ -0.37
SQLE-205ENST00000521232 RRNAD1Q96FB5 475 aaKnown RBP12.76□□□□□ -0.37
SQLE-205ENST00000521232 TMEM222Q9H0R3 208 aa12.76□□□□□ -0.37
SQLE-205ENST00000521232 HIPK2Q9H2X6 1198 aa12.76□□□□□ -0.37
SQLE-205ENST00000521232 RSL24D1Q9UHA3 163 aaKnown RBP12.76□□□□□ -0.37
SQLE-205ENST00000521232 C14orf166Q9Y224 244 aaKnown RBP12.76□□□□□ -0.37
SQLE-205ENST00000521232 A0A0G2JRQ6 117 aa12.75□□□□□ -0.37
SQLE-205ENST00000521232 TEX13DA0A0J9YY54 714 aaPredicted RBP12.75□□□□□ -0.37
SQLE-205ENST00000521232 C15orf62A8K5M9 175 aa12.75□□□□□ -0.37
SQLE-205ENST00000521232 TSPAN4O14817 238 aa12.75□□□□□ -0.37
SQLE-205ENST00000521232 NUPL2O15504 423 aaKnown RBP12.75□□□□□ -0.37
SQLE-205ENST00000521232 IFNA17P01571 189 aa12.75□□□□□ -0.37
SQLE-205ENST00000521232 TNFSF8P32971 234 aa12.75□□□□□ -0.37
SQLE-205ENST00000521232 SNCAP37840 140 aa12.75□□□□□ -0.37
SQLE-205ENST00000521232 RELQ04864 619 aaPredicted RBP12.75□□□□□ -0.37
SQLE-205ENST00000521232 SPINK9Q5DT21 86 aa12.75□□□□□ -0.37
SQLE-205ENST00000521232 PRRT1Q99946 306 aa12.75□□□□□ -0.37
SQLE-205ENST00000521232 C20orf24Q9BUV8 137 aa12.75□□□□□ -0.37
SQLE-205ENST00000521232 NAA60Q9H7X0 242 aa12.75□□□□□ -0.37
SQLE-205ENST00000521232 FABP12A6NFH5 140 aa12.74□□□□□ -0.37
SQLE-205ENST00000521232 OR5AC1P0C628 307 aa12.74□□□□□ -0.37
SQLE-205ENST00000521232 LYL1P12980 280 aa12.74□□□□□ -0.37
SQLE-205ENST00000521232 ETV6P41212 452 aa12.74□□□□□ -0.37
SQLE-205ENST00000521232 DHODHQ02127 395 aa12.74□□□□□ -0.37
SQLE-205ENST00000521232 AARDQ4LEZ3 155 aa12.74□□□□□ -0.37
SQLE-205ENST00000521232 LAMTOR1Q6IAA8 161 aa12.74□□□□□ -0.37
SQLE-205ENST00000521232 Q6ZRM9 215 aa12.74□□□□□ -0.37
SQLE-205ENST00000521232 FAM219AQ8IW50 185 aa12.74□□□□□ -0.37
SQLE-205ENST00000521232 SLC35G3Q8N808 338 aa12.74□□□□□ -0.37
SQLE-205ENST00000521232 OR51S1Q8NGJ8 323 aa12.74□□□□□ -0.37
SQLE-205ENST00000521232 PINX1Q96BK5 328 aaKnown RBP12.74□□□□□ -0.37
SQLE-205ENST00000521232 OR10C1Q96KK4 312 aa12.74□□□□□ -0.37
SQLE-205ENST00000521232 SPAG8Q99932 426 aaPredicted RBP12.74□□□□□ -0.37
SQLE-205ENST00000521232 PDCD10Q9BUL8 212 aa12.74□□□□□ -0.37
SQLE-205ENST00000521232 IGHV3OR16-8A0A075B7F1 116 aa12.73□□□□□ -0.37
SQLE-205ENST00000521232 CRYM-AS1A6NIL9 109 aa12.73□□□□□ -0.37
SQLE-205ENST00000521232 IGHV3-48P01763 117 aa12.73□□□□□ -0.37
SQLE-205ENST00000521232 SUB1P53999 127 aaKnown RBP eCLIP12.73□□□□□ -0.37
SQLE-205ENST00000521232 SELENOHQ8IZQ5 122 aaKnown RBP12.73□□□□□ -0.37
SQLE-205ENST00000521232 MCFD2Q8NI22 146 aa12.73□□□□□ -0.37
SQLE-205ENST00000521232 LHFPL5Q8TAF8 219 aa12.73□□□□□ -0.37
SQLE-205ENST00000521232 RBPMSQ93062 196 aaKnown RBP12.73□□□□□ -0.37
SQLE-205ENST00000521232 SMPXQ9UHP9 88 aa12.73□□□□□ -0.37
SQLE-205ENST00000521232 TENM2Q9NT68 2774 aa12.73□□□□□ -0.37
SQLE-205ENST00000521232 ZNF207O43670 478 aaKnown RBP12.72□□□□□ -0.37
SQLE-205ENST00000521232 GNG7O60262 68 aa12.72□□□□□ -0.37
SQLE-205ENST00000521232 RNASE2P10153 161 aaKnown RBP12.72□□□□□ -0.37
SQLE-205ENST00000521232 DUSP18Q8NEJ0 188 aa12.72□□□□□ -0.37
SQLE-205ENST00000521232 OR52E5Q8NH55 327 aa12.72□□□□□ -0.37
SQLE-205ENST00000521232 RNASE11Q8TAA1 199 aaKnown RBP12.72□□□□□ -0.37
SQLE-205ENST00000521232 LYSTQ99698 3801 aa12.72□□□□□ -0.37
SQLE-205ENST00000521232 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.72□□□□□ -0.37
SQLE-205ENST00000521232 SCP2D1Q9UJQ7 156 aa12.72□□□□□ -0.37
SQLE-205ENST00000521232 TMEM56-RWDD3S4R434 201 aa12.72□□□□□ -0.37
SQLE-205ENST00000521232 IGHV7-4-1A0A0J9YVY3 117 aa12.71□□□□□ -0.37
SQLE-205ENST00000521232 CORTO00230 105 aa12.71□□□□□ -0.37
SQLE-205ENST00000521232 YIF1AO95070 293 aa12.71□□□□□ -0.37
SQLE-205ENST00000521232 NPBWR1P48145 328 aa12.71□□□□□ -0.37
SQLE-205ENST00000521232 SPCS3P61009 180 aa12.71□□□□□ -0.37
SQLE-205ENST00000521232 BSXQ3C1V8 233 aa12.71□□□□□ -0.37
SQLE-205ENST00000521232 SCGB3A2Q96PL1 93 aa12.71□□□□□ -0.37
SQLE-205ENST00000521232 RETNQ9HD89 108 aa12.71□□□□□ -0.37
SQLE-205ENST00000521232 ENY2Q9NPA8 101 aa12.71□□□□□ -0.37
SQLE-205ENST00000521232 LOC102724200A0A096LPH7 203 aaPredicted RBP12.7□□□□□ -0.38
SQLE-205ENST00000521232 TRAV14DV4A0A0A6YYC5 116 aa12.7□□□□□ -0.38
SQLE-205ENST00000521232 CHEK1O14757 476 aa12.7□□□□□ -0.38
SQLE-205ENST00000521232 TMEM50AO95807 157 aa12.7□□□□□ -0.38
SQLE-205ENST00000521232 HOXA1P49639 335 aaPredicted RBP12.7□□□□□ -0.38
SQLE-205ENST00000521232 TMEM116Q8NCL8 245 aa12.7□□□□□ -0.38
SQLE-205ENST00000521232 TMEM230Q96A57 120 aa12.7□□□□□ -0.38
SQLE-205ENST00000521232 GPR146Q96CH1 333 aa12.7□□□□□ -0.38
SQLE-205ENST00000521232 GALNT14Q96FL9 552 aa12.7□□□□□ -0.38
SQLE-205ENST00000521232 RHPN1-AS1Q9BWJ2 59 aa12.7□□□□□ -0.38
SQLE-205ENST00000521232 GGTLC1Q9BX51 225 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms