RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 TNFAIP8O95379 198 aa11.19□□□□□ -0.62
CSMD1-207ENST00000520451 ATF4P18848 351 aaPredicted RBP11.19□□□□□ -0.62
CSMD1-207ENST00000520451 HSPE1P61604 102 aaKnown RBP11.19□□□□□ -0.62
CSMD1-207ENST00000520451 ERHP84090 104 aaKnown RBP11.19□□□□□ -0.62
CSMD1-207ENST00000520451 ZNF124Q15973 351 aa11.19□□□□□ -0.62
CSMD1-207ENST00000520451 SPINK9Q5DT21 86 aa11.19□□□□□ -0.62
CSMD1-207ENST00000520451 GBGT1Q8N5D6 347 aa11.19□□□□□ -0.62
CSMD1-207ENST00000520451 CMTM3Q96MX0 182 aa11.19□□□□□ -0.62
CSMD1-207ENST00000520451 KLK5Q9Y337 293 aaPredicted RBP11.19□□□□□ -0.62
CSMD1-207ENST00000520451 HPGDSO60760 199 aa11.18□□□□□ -0.62
CSMD1-207ENST00000520451 PGAM2P15259 253 aa11.18□□□□□ -0.62
CSMD1-207ENST00000520451 ELK1P19419 428 aa11.18□□□□□ -0.62
CSMD1-207ENST00000520451 CMC4P56277 68 aaPredicted RBP11.18□□□□□ -0.62
CSMD1-207ENST00000520451 VBP1P61758 197 aa11.18□□□□□ -0.62
CSMD1-207ENST00000520451 IZUMO4Q1ZYL8 232 aa11.18□□□□□ -0.62
CSMD1-207ENST00000520451 RNASE12Q5GAN4 147 aaKnown RBP11.18□□□□□ -0.62
CSMD1-207ENST00000520451 GINS3Q9BRX5 216 aa11.18□□□□□ -0.62
CSMD1-207ENST00000520451 FUNDC2Q9BWH2 189 aa11.18□□□□□ -0.62
CSMD1-207ENST00000520451 CSTL1Q9H114 145 aa11.18□□□□□ -0.62
CSMD1-207ENST00000520451 MPTX1A8MV57 137 aa11.17□□□□□ -0.62
CSMD1-207ENST00000520451 PI3P19957 117 aa11.17□□□□□ -0.62
CSMD1-207ENST00000520451 TCF24Q7RTU0 167 aa11.17□□□□□ -0.62
CSMD1-207ENST00000520451 SLC35G3Q8N808 338 aa11.17□□□□□ -0.62
CSMD1-207ENST00000520451 FAM25AB3EWG3 89 aa11.16□□□□□ -0.62
CSMD1-207ENST00000520451 FAM25CB3EWG5 89 aa11.16□□□□□ -0.62
CSMD1-207ENST00000520451 FAM25GB3EWG6 89 aa11.16□□□□□ -0.62
CSMD1-207ENST00000520451 SNCAP37840 140 aa11.16□□□□□ -0.62
CSMD1-207ENST00000520451 NPBWR1P48145 328 aa11.16□□□□□ -0.62
CSMD1-207ENST00000520451 RND3P61587 244 aa11.16□□□□□ -0.62
CSMD1-207ENST00000520451 PAFAH1B2P68402 229 aa11.16□□□□□ -0.62
CSMD1-207ENST00000520451 FAM90A2PQ658T7 463 aa11.16□□□□□ -0.62
CSMD1-207ENST00000520451 TOMM20LQ6UXN7 152 aa11.16□□□□□ -0.62
CSMD1-207ENST00000520451 DUSP18Q8NEJ0 188 aa11.16□□□□□ -0.62
CSMD1-207ENST00000520451 GATAD1Q8WUU5 269 aa11.16□□□□□ -0.62
CSMD1-207ENST00000520451 ST8SIA2Q92186 375 aa11.16□□□□□ -0.62
CSMD1-207ENST00000520451 ZNF486Q96H40 463 aaPredicted RBP11.16□□□□□ -0.62
CSMD1-207ENST00000520451 ST8SIA3O43173 380 aa11.15□□□□□ -0.62
CSMD1-207ENST00000520451 IGKV1-5P01602 117 aa11.15□□□□□ -0.62
CSMD1-207ENST00000520451 CD5P06127 495 aa11.15□□□□□ -0.62
CSMD1-207ENST00000520451 AKR1C2P52895 323 aa11.15□□□□□ -0.62
CSMD1-207ENST00000520451 PIGPP57054 158 aa11.15□□□□□ -0.62
CSMD1-207ENST00000520451 RNASE10Q5GAN6 216 aaKnown RBP11.15□□□□□ -0.62
CSMD1-207ENST00000520451 PHLDA1Q8WV24 401 aaPredicted RBP11.15□□□□□ -0.62
CSMD1-207ENST00000520451 TP53RKQ96S44 253 aa11.15□□□□□ -0.62
CSMD1-207ENST00000520451 RARRES2Q99969 163 aa11.15□□□□□ -0.62
CSMD1-207ENST00000520451 PUS1Q9Y606 427 aaKnown RBP eCLIP11.15□□□□□ -0.62
CSMD1-207ENST00000520451 KMT2AQ03164 3969 aa11.15□□□□□ -0.62
CSMD1-207ENST00000520451 A0A0B4J293 547 aa11.14□□□□□ -0.63
CSMD1-207ENST00000520451 IGHV3-66A0A0C4DH42 116 aa11.14□□□□□ -0.63
CSMD1-207ENST00000520451 DNASE2O00115 360 aaPredicted RBP11.14□□□□□ -0.63
CSMD1-207ENST00000520451 IFNA17P01571 189 aa11.14□□□□□ -0.63
CSMD1-207ENST00000520451 APOHP02749 345 aaPredicted RBP11.14□□□□□ -0.63
CSMD1-207ENST00000520451 P0C879 139 aa11.14□□□□□ -0.63
CSMD1-207ENST00000520451 RORCP51449 518 aa11.14□□□□□ -0.63
CSMD1-207ENST00000520451 PPP5CP53041 499 aa11.14□□□□□ -0.63
CSMD1-207ENST00000520451 MZT2AQ6P582 158 aa11.14□□□□□ -0.63
CSMD1-207ENST00000520451 ZNF600Q6ZNG1 722 aa11.14□□□□□ -0.63
CSMD1-207ENST00000520451 LHFPL1Q86WI0 220 aa11.14□□□□□ -0.63
CSMD1-207ENST00000520451 PDCD10Q9BUL8 212 aa11.14□□□□□ -0.63
CSMD1-207ENST00000520451 MS4A6AQ9H2W1 248 aa11.14□□□□□ -0.63
CSMD1-207ENST00000520451 VSIRQ9H7M9 311 aa11.14□□□□□ -0.63
CSMD1-207ENST00000520451 ZFAND3Q9H8U3 227 aa11.14□□□□□ -0.63
CSMD1-207ENST00000520451 KLK11Q9UBX7 282 aa11.14□□□□□ -0.63
CSMD1-207ENST00000520451 FRAS1Q86XX4 4008 aa11.13□□□□□ -0.63
CSMD1-207ENST00000520451 C3orf85A0A1B0GTC6 90 aa11.13□□□□□ -0.63
CSMD1-207ENST00000520451 DFFBO76075 338 aa11.13□□□□□ -0.63
CSMD1-207ENST00000520451 ATG12O94817 140 aa11.13□□□□□ -0.63
CSMD1-207ENST00000520451 CA1P00915 261 aaPredicted RBP11.13□□□□□ -0.63
CSMD1-207ENST00000520451 CD3DP04234 171 aa11.13□□□□□ -0.63
CSMD1-207ENST00000520451 HOXA1P49639 335 aaPredicted RBP11.13□□□□□ -0.63
CSMD1-207ENST00000520451 RPL11P62913 178 aaKnown RBP11.13□□□□□ -0.63
CSMD1-207ENST00000520451 TRIM16LQ309B1 348 aa11.13□□□□□ -0.63
CSMD1-207ENST00000520451 LILRB2Q8N423 598 aa11.13□□□□□ -0.63
CSMD1-207ENST00000520451 ARRDC1Q8N5I2 433 aa11.13□□□□□ -0.63
CSMD1-207ENST00000520451 OR11H2Q8NH07 326 aa11.13□□□□□ -0.63
CSMD1-207ENST00000520451 OR52I2Q8NH67 350 aa11.13□□□□□ -0.63
CSMD1-207ENST00000520451 A0A1B0GU03 582 aa11.12□□□□□ -0.63
CSMD1-207ENST00000520451 INS-IGF2F8WCM5 200 aa11.12□□□□□ -0.63
CSMD1-207ENST00000520451 CORTO00230 105 aa11.12□□□□□ -0.63
CSMD1-207ENST00000520451 TMEM50AO95807 157 aa11.12□□□□□ -0.63
CSMD1-207ENST00000520451 RNASE2P10153 161 aaKnown RBP11.12□□□□□ -0.63
CSMD1-207ENST00000520451 TBPP20226 339 aa11.12□□□□□ -0.63
CSMD1-207ENST00000520451 ETV6P41212 452 aa11.12□□□□□ -0.63
CSMD1-207ENST00000520451 SUB1P53999 127 aaKnown RBP eCLIP11.12□□□□□ -0.63
CSMD1-207ENST00000520451 DEFB131AP59861 70 aa11.12□□□□□ -0.63
CSMD1-207ENST00000520451 NANOS2P60321 138 aaKnown RBP11.12□□□□□ -0.63
CSMD1-207ENST00000520451 SP6Q3SY56 376 aa11.12□□□□□ -0.63
CSMD1-207ENST00000520451 LEMD1Q68G75 181 aa11.12□□□□□ -0.63
CSMD1-207ENST00000520451 AP3S1Q92572 193 aa11.12□□□□□ -0.63
CSMD1-207ENST00000520451 C11orf68Q9H3H3 251 aaKnown RBP11.12□□□□□ -0.63
CSMD1-207ENST00000520451 TMEM231Q9H6L2 316 aa11.12□□□□□ -0.63
CSMD1-207ENST00000520451 ENY2Q9NPA8 101 aa11.12□□□□□ -0.63
CSMD1-207ENST00000520451 COPZ2Q9P299 210 aa11.12□□□□□ -0.63
CSMD1-207ENST00000520451 EXTL2Q9UBQ6 330 aa11.12□□□□□ -0.63
CSMD1-207ENST00000520451 TRAV2A0A0B4J234 112 aa11.11□□□□□ -0.63
CSMD1-207ENST00000520451 PVRIGQ6DKI7 326 aa11.11□□□□□ -0.63
CSMD1-207ENST00000520451 RPP25LQ8N5L8 163 aaKnown RBP11.11□□□□□ -0.63
CSMD1-207ENST00000520451 FAM24BQ8N5W8 94 aa11.11□□□□□ -0.63
CSMD1-207ENST00000520451 CCDC71LQ8N9Z2 235 aa11.11□□□□□ -0.63
CSMD1-207ENST00000520451 OR4D10Q8NGI6 311 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms