RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 DEDDO75618 318 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 GIG44P09565 113 aaPredicted RBP6.34□□□□□ -1.39
PABPC1-202ENST00000517403 HIST1H1BP16401 226 aaKnown RBP6.34□□□□□ -1.39
PABPC1-202ENST00000517403 HERV-K104P61576 105 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 CATR1Q13166 79 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 CTF1Q16619 201 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 MLANAQ16655 118 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 SLC25A24Q6NUK1 477 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 FAAP20Q6NZ36 180 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 LHFPL1Q86WI0 220 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 UBAC2Q8NBM4 344 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 OR1L6Q8NGR2 347 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 OR1L8Q8NGR8 309 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 OR5H2Q8NGV7 314 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 OR5B3Q8NH48 314 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 LHFPL5Q8TAF8 219 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 VN1R17PQ8TDU5 208 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 TMEM170AQ8WVE7 144 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 LSM10Q969L4 123 aaKnown RBP6.34□□□□□ -1.39
PABPC1-202ENST00000517403 CXorf58Q96LI9 332 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 C20orf24Q9BUV8 137 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 C5orf66Q9H5L9 145 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 MAP6D1Q9H9H5 199 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 DAZ1Q9NQZ3 744 aaKnown RBP6.34□□□□□ -1.39
PABPC1-202ENST00000517403 C21orf62Q9NYP8 219 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 MRPL27Q9P0M9 148 aaKnown RBP6.34□□□□□ -1.39
PABPC1-202ENST00000517403 KLK11Q9UBX7 282 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 VPS13DQ5THJ4 4388 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 IGKV3-7A0A075B6H7 116 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 A0A0B4J293 547 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 IGHV3-66A0A0C4DH42 116 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 GPR31O00270 319 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 MT-CO2P00403 227 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 IFNA6P05013 189 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 FGF2P09038 288 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 GYPEP15421 78 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 CBX5P45973 191 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 TFPI2P48307 235 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 FAM106AQ4KMX7 169 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 PVRIGQ6DKI7 326 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 Q6ZRM9 215 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 CCDC28AQ8IWP9 274 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 TSPAN14Q8NG11 270 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 OR52I2Q8NH67 350 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 BSCL2Q96G97 398 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-202ENST00000517403 OR10C1Q96KK4 312 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 ABHD1Q96SE0 405 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 SPAG8Q99932 426 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-202ENST00000517403 SRSF8Q9BRL6 282 aaKnown RBP6.33□□□□□ -1.4
PABPC1-202ENST00000517403 DIABLOQ9NR28 239 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 COMMD3Q9UBI1 195 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 SMPXQ9UHP9 88 aa6.33□□□□□ -1.4
PABPC1-202ENST00000517403 DNAH10Q8IVF4 4471 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 A0A087WWL8 130 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 TRAV25A0A0B4J276 109 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 IGHV7-4-1A0A0J9YVY3 117 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 NDUFA4O00483 81 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 DEFB4AO15263 64 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 NUPL2O15504 423 aaKnown RBP6.32□□□□□ -1.4
PABPC1-202ENST00000517403 RNASE2P10153 161 aaKnown RBP6.32□□□□□ -1.4
PABPC1-202ENST00000517403 BTF3P20290 206 aaKnown RBP6.32□□□□□ -1.4
PABPC1-202ENST00000517403 C4BPBP20851 252 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 PRSS3P35030 304 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 RANBP1P43487 201 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 PPP5CP53041 499 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 ELLP55199 621 aaPredicted RBP6.32□□□□□ -1.4
PABPC1-202ENST00000517403 PRCDQ00LT1 54 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 SP6Q3SY56 376 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 SLC16A13Q7RTY0 426 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 GBGT1Q8N5D6 347 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 ZNF114Q8NC26 417 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 ST8SIA2Q92186 375 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 MARC2Q969Z3 335 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 RNF183Q96D59 192 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 RHPN1-AS1Q9BWJ2 59 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 Q9H521 79 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 UFC1Q9Y3C8 167 aa6.32□□□□□ -1.4
PABPC1-202ENST00000517403 ST8SIA3O43173 380 aa6.31□□□□□ -1.4
PABPC1-202ENST00000517403 NXPH3O95157 252 aa6.31□□□□□ -1.4
PABPC1-202ENST00000517403 GABARAPO95166 117 aa6.31□□□□□ -1.4
PABPC1-202ENST00000517403 DHFRP00374 187 aa6.31□□□□□ -1.4
PABPC1-202ENST00000517403 CD3DP04234 171 aa6.31□□□□□ -1.4
PABPC1-202ENST00000517403 H2AFB1P0C5Y9 115 aa6.31□□□□□ -1.4
PABPC1-202ENST00000517403 H2AFB2P0C5Z0 115 aa6.31□□□□□ -1.4
PABPC1-202ENST00000517403 TAS2R46P59540 309 aa6.31□□□□□ -1.4
PABPC1-202ENST00000517403 ERVK-16P61578 105 aa6.31□□□□□ -1.4
PABPC1-202ENST00000517403 Q56UQ5 140 aa6.31□□□□□ -1.4
PABPC1-202ENST00000517403 TOMM20LQ6UXN7 152 aa6.31□□□□□ -1.4
PABPC1-202ENST00000517403 CADM3Q8N126 398 aa6.31□□□□□ -1.4
PABPC1-202ENST00000517403 OR1P1Q8NH06 330 aa6.31□□□□□ -1.4
PABPC1-202ENST00000517403 CD300LFQ8TDQ1 290 aa6.31□□□□□ -1.4
PABPC1-202ENST00000517403 S100A16Q96FQ6 103 aaKnown RBP6.31□□□□□ -1.4
PABPC1-202ENST00000517403 SCRT1Q9BWW7 348 aa6.31□□□□□ -1.4
PABPC1-202ENST00000517403 NXF2Q9GZY0 626 aaKnown RBP6.31□□□□□ -1.4
PABPC1-202ENST00000517403 KIAA1109Q2LD37 5005 aa6.3□□□□□ -1.4
PABPC1-202ENST00000517403 CXorf65A6NEN9 183 aa6.3□□□□□ -1.4
PABPC1-202ENST00000517403 C15orf62A8K5M9 175 aa6.3□□□□□ -1.4
PABPC1-202ENST00000517403 SPRY2O43597 315 aa6.3□□□□□ -1.4
PABPC1-202ENST00000517403 IGKV1-17P01599 117 aa6.3□□□□□ -1.4
PABPC1-202ENST00000517403 APOA1P02647 267 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms