RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	MUC4	Q99102	2169 aa		11.42	□□□□□ -0.58
LMNA-223	ENST00000515459	DBX1	A6NMT0	343 aa		11.41	□□□□□ -0.58
LMNA-223	ENST00000515459	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.41	□□□□□ -0.58
LMNA-223	ENST00000515459	IGHV3-48	P01763	117 aa		11.41	□□□□□ -0.58
LMNA-223	ENST00000515459	APOH	P02749	345 aa	Predicted RBP	11.41	□□□□□ -0.58
LMNA-223	ENST00000515459	GIG44	P09565	113 aa	Predicted RBP	11.41	□□□□□ -0.58
LMNA-223	ENST00000515459	MORN3	Q6PF18	240 aa	Predicted RBP	11.41	□□□□□ -0.58
LMNA-223	ENST00000515459	DHRS11	Q6UWP2	260 aa		11.41	□□□□□ -0.58
LMNA-223	ENST00000515459	TOMM20L	Q6UXN7	152 aa		11.41	□□□□□ -0.58
LMNA-223	ENST00000515459	CMTM1	Q8IZ96	169 aa		11.41	□□□□□ -0.58
LMNA-223	ENST00000515459	ZNF114	Q8NC26	417 aa		11.41	□□□□□ -0.58
LMNA-223	ENST00000515459	MOB3A	Q96BX8	217 aa		11.41	□□□□□ -0.58
LMNA-223	ENST00000515459	DIABLO	Q9NR28	239 aa		11.41	□□□□□ -0.58
LMNA-223	ENST00000515459	RABAC1	Q9UI14	185 aa		11.41	□□□□□ -0.58
LMNA-223	ENST00000515459	IGHV3-66	A0A0C4DH42	116 aa		11.4	□□□□□ -0.58
LMNA-223	ENST00000515459	MEIS3P1	A6NDR6	274 aa		11.4	□□□□□ -0.58
LMNA-223	ENST00000515459	SPP1	P10451	314 aa		11.4	□□□□□ -0.58
LMNA-223	ENST00000515459	MXD1	Q05195	221 aa		11.4	□□□□□ -0.58
LMNA-223	ENST00000515459	TRPT1	Q86TN4	253 aa	Known RBP	11.4	□□□□□ -0.58
LMNA-223	ENST00000515459	POM121L12	Q8N7R1	296 aa		11.4	□□□□□ -0.58
LMNA-223	ENST00000515459	PINX1	Q96BK5	328 aa	Known RBP	11.4	□□□□□ -0.58
LMNA-223	ENST00000515459	CNBD2	Q96M20	576 aa		11.4	□□□□□ -0.58
LMNA-223	ENST00000515459	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.4	□□□□□ -0.58
LMNA-223	ENST00000515459	TMEM231	Q9H6L2	316 aa		11.4	□□□□□ -0.58
LMNA-223	ENST00000515459	IFT46	Q9NQC8	304 aa		11.4	□□□□□ -0.58
LMNA-223	ENST00000515459	SSR3	Q9UNL2	185 aa		11.4	□□□□□ -0.58
LMNA-223	ENST00000515459	AGRN	O00468	2067 aa		11.39	□□□□□ -0.59
LMNA-223	ENST00000515459	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.39	□□□□□ -0.59
LMNA-223	ENST00000515459	AMBP	P02760	352 aa		11.39	□□□□□ -0.59
LMNA-223	ENST00000515459		P0DMU3	169 aa		11.39	□□□□□ -0.59
LMNA-223	ENST00000515459	FAM231A	P0DMU4	169 aa		11.39	□□□□□ -0.59
LMNA-223	ENST00000515459	FAM231C	P0DMU5	169 aa		11.39	□□□□□ -0.59
LMNA-223	ENST00000515459	PSMB9	P28065	219 aa		11.39	□□□□□ -0.59
LMNA-223	ENST00000515459	SDC2	P34741	201 aa		11.39	□□□□□ -0.59
LMNA-223	ENST00000515459	RFX2	P48378	723 aa		11.39	□□□□□ -0.59
LMNA-223	ENST00000515459	IDNK	Q5T6J7	187 aa		11.39	□□□□□ -0.59
LMNA-223	ENST00000515459	UBE2U	Q5VVX9	321 aa		11.39	□□□□□ -0.59
LMNA-223	ENST00000515459	ZNF600	Q6ZNG1	722 aa		11.39	□□□□□ -0.59
LMNA-223	ENST00000515459	ZFAND3	Q9H8U3	227 aa		11.39	□□□□□ -0.59
LMNA-223	ENST00000515459	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
LMNA-223	ENST00000515459		X6R8D5	127 aa		11.39	□□□□□ -0.59
LMNA-223	ENST00000515459	PKHD1	P08F94	4074 aa		11.39	□□□□□ -0.59
LMNA-223	ENST00000515459	FAT2	Q9NYQ8	4349 aa		11.39	□□□□□ -0.59
LMNA-223	ENST00000515459	GPR31	O00270	319 aa		11.38	□□□□□ -0.59
LMNA-223	ENST00000515459	RTL8C	O15255	209 aa		11.38	□□□□□ -0.59
LMNA-223	ENST00000515459	C4BPB	P20851	252 aa		11.38	□□□□□ -0.59
LMNA-223	ENST00000515459	NPBWR1	P48145	328 aa		11.38	□□□□□ -0.59
LMNA-223	ENST00000515459	PRCD	Q00LT1	54 aa		11.38	□□□□□ -0.59
LMNA-223	ENST00000515459	OR4A16	Q8NH70	328 aa		11.38	□□□□□ -0.59
LMNA-223	ENST00000515459	DEFB131B	A0A096LNP1	70 aa		11.37	□□□□□ -0.59
LMNA-223	ENST00000515459		A0A1W2PS18	150 aa		11.37	□□□□□ -0.59
LMNA-223	ENST00000515459	CLEC2L	P0C7M8	214 aa		11.37	□□□□□ -0.59
LMNA-223	ENST00000515459	NPPC	P23582	126 aa		11.37	□□□□□ -0.59
LMNA-223	ENST00000515459	GABARAPL2	P60520	117 aa		11.37	□□□□□ -0.59
LMNA-223	ENST00000515459	ERH	P84090	104 aa	Known RBP	11.37	□□□□□ -0.59
LMNA-223	ENST00000515459	H2BFWT	Q7Z2G1	175 aa		11.37	□□□□□ -0.59
LMNA-223	ENST00000515459	STXBP6	Q8NFX7	210 aa		11.37	□□□□□ -0.59
LMNA-223	ENST00000515459	GRAMD2B	Q96HH9	432 aa		11.37	□□□□□ -0.59
LMNA-223	ENST00000515459	TBC1D24	Q9ULP9	559 aa		11.37	□□□□□ -0.59
LMNA-223	ENST00000515459	DNAH2	Q9P225	4427 aa		11.36	□□□□□ -0.59
LMNA-223	ENST00000515459		A0A1B0GU03	582 aa		11.36	□□□□□ -0.59
LMNA-223	ENST00000515459		K7EQG2	157 aa		11.36	□□□□□ -0.59
LMNA-223	ENST00000515459		M0R2N4	97 aa		11.36	□□□□□ -0.59
LMNA-223	ENST00000515459	PMP2	P02689	132 aa		11.36	□□□□□ -0.59
LMNA-223	ENST00000515459	HSPA13	P48723	471 aa		11.36	□□□□□ -0.59
LMNA-223	ENST00000515459	CSNK1G2-AS1	Q8NCQ2	148 aa		11.36	□□□□□ -0.59
LMNA-223	ENST00000515459	OR5H2	Q8NGV7	314 aa		11.36	□□□□□ -0.59
LMNA-223	ENST00000515459	OR6F1	Q8NGZ6	308 aa		11.36	□□□□□ -0.59
LMNA-223	ENST00000515459	SEC22A	Q96IW7	307 aa		11.36	□□□□□ -0.59
LMNA-223	ENST00000515459	NDUFAF3	Q9BU61	184 aa		11.36	□□□□□ -0.59
LMNA-223	ENST00000515459	FXYD6	Q9H0Q3	95 aa		11.36	□□□□□ -0.59
LMNA-223	ENST00000515459	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.36	□□□□□ -0.59
LMNA-223	ENST00000515459	CLEC5A	Q9NY25	188 aa		11.36	□□□□□ -0.59
LMNA-223	ENST00000515459	CELA1	Q9UNI1	258 aa		11.36	□□□□□ -0.59
LMNA-223	ENST00000515459	RYR1	P21817	5038 aa		11.35	□□□□□ -0.59
LMNA-223	ENST00000515459	KNCN	A6PVL3	124 aa		11.35	□□□□□ -0.59
LMNA-223	ENST00000515459	TMEM50A	O95807	157 aa		11.35	□□□□□ -0.59
LMNA-223	ENST00000515459	ZNF688	P0C7X2	276 aa		11.35	□□□□□ -0.59
LMNA-223	ENST00000515459	S100G	P29377	79 aa		11.35	□□□□□ -0.59
LMNA-223	ENST00000515459	TAS2R46	P59540	309 aa		11.35	□□□□□ -0.59
LMNA-223	ENST00000515459	HSPE1	P61604	102 aa	Known RBP	11.35	□□□□□ -0.59
LMNA-223	ENST00000515459	C12orf74	Q32Q52	190 aa		11.35	□□□□□ -0.59
LMNA-223	ENST00000515459	LGALS9B	Q3B8N2	356 aa		11.35	□□□□□ -0.59
LMNA-223	ENST00000515459	ACTL10	Q5JWF8	245 aa		11.35	□□□□□ -0.59
LMNA-223	ENST00000515459	IZUMO2	Q6UXV1	221 aa		11.35	□□□□□ -0.59
LMNA-223	ENST00000515459	ZNF767P	Q75MW2	155 aa		11.35	□□□□□ -0.59
LMNA-223	ENST00000515459	FCGR1B	Q92637	280 aa		11.35	□□□□□ -0.59
LMNA-223	ENST00000515459	VCX3B	Q9H321	246 aa		11.35	□□□□□ -0.59
LMNA-223	ENST00000515459	ANKRD65	E5RJM6	399 aa		11.34	□□□□□ -0.59
LMNA-223	ENST00000515459	PHLDA2	Q53GA4	152 aa		11.34	□□□□□ -0.59
LMNA-223	ENST00000515459	SPART	Q8N0X7	666 aa		11.34	□□□□□ -0.59
LMNA-223	ENST00000515459	S100A16	Q96FQ6	103 aa	Known RBP	11.34	□□□□□ -0.59
LMNA-223	ENST00000515459	METTL26	Q96S19	204 aa		11.34	□□□□□ -0.59
LMNA-223	ENST00000515459	RNF167	Q9H6Y7	350 aa		11.34	□□□□□ -0.59
LMNA-223	ENST00000515459	ANAPC10	Q9UM13	185 aa		11.34	□□□□□ -0.59
LMNA-223	ENST00000515459	NAT1	P18440	290 aa		11.33	□□□□□ -0.6
LMNA-223	ENST00000515459	NPY1R	P25929	384 aa		11.33	□□□□□ -0.6
LMNA-223	ENST00000515459	CRYBB3	P26998	211 aa		11.33	□□□□□ -0.6
LMNA-223	ENST00000515459	SNCA	P37840	140 aa		11.33	□□□□□ -0.6
LMNA-223	ENST00000515459	P2RY1	P47900	373 aa		11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms