RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 ARG1P05089 322 aa3□□□□□ -1.93
CAST-242ENST00000515063 CGB3P0DN86 165 aa3□□□□□ -1.93
CAST-242ENST00000515063 CGB7P0DN87 165 aa3□□□□□ -1.93
CAST-242ENST00000515063 IAPPP10997 89 aa3□□□□□ -1.93
CAST-242ENST00000515063 CD99P14209 185 aa3□□□□□ -1.93
CAST-242ENST00000515063 NQO2P16083 231 aa3□□□□□ -1.93
CAST-242ENST00000515063 PRDX2P32119 198 aa3□□□□□ -1.93
CAST-242ENST00000515063 DUTP33316 252 aaKnown RBP3□□□□□ -1.93
CAST-242ENST00000515063 MPV17P39210 176 aa3□□□□□ -1.93
CAST-242ENST00000515063 OPRK1P41145 380 aa3□□□□□ -1.93
CAST-242ENST00000515063 RPS10P46783 165 aaKnown RBP3□□□□□ -1.93
CAST-242ENST00000515063 GABRA2P47869 451 aa3□□□□□ -1.93
CAST-242ENST00000515063 CCL11P51671 97 aa3□□□□□ -1.93
CAST-242ENST00000515063 OR2B8PP59922 312 aa3□□□□□ -1.93
CAST-242ENST00000515063 ERVS71-1P61550 626 aa3□□□□□ -1.93
CAST-242ENST00000515063 ERVK-16P61578 105 aa3□□□□□ -1.93
CAST-242ENST00000515063 RAB11AP62491 216 aa3□□□□□ -1.93
CAST-242ENST00000515063 RPL30P62888 115 aaKnown RBP3□□□□□ -1.93
CAST-242ENST00000515063 MEF2BQ02080 365 aaPredicted RBP3□□□□□ -1.93
CAST-242ENST00000515063 TMEM267Q0VDI3 215 aaPredicted RBP3□□□□□ -1.93
CAST-242ENST00000515063 FABP9Q0Z7S8 132 aa3□□□□□ -1.93
CAST-242ENST00000515063 KIAA0141Q14154 515 aaPredicted RBP3□□□□□ -1.93
CAST-242ENST00000515063 ZNF726P1Q15940 193 aa3□□□□□ -1.93
CAST-242ENST00000515063 HAGHQ16775 308 aa3□□□□□ -1.93
CAST-242ENST00000515063 TMEM241Q24JQ0 296 aa3□□□□□ -1.93
CAST-242ENST00000515063 MORN2Q502X0 79 aa3□□□□□ -1.93
CAST-242ENST00000515063 AKIRIN2Q53H80 203 aa3□□□□□ -1.93
CAST-242ENST00000515063 SPATA46Q5T0L3 261 aa3□□□□□ -1.93
CAST-242ENST00000515063 WDR25Q64LD2 544 aaPredicted RBP3□□□□□ -1.93
CAST-242ENST00000515063 NCR3LG1Q68D85 454 aa3□□□□□ -1.93
CAST-242ENST00000515063 ETFRF1Q6IPR1 90 aa3□□□□□ -1.93
CAST-242ENST00000515063 Q6ZR03 302 aa3□□□□□ -1.93
CAST-242ENST00000515063 LYG1Q8N1E2 194 aa3□□□□□ -1.93
CAST-242ENST00000515063 ZADH2Q8N4Q0 377 aa3□□□□□ -1.93
CAST-242ENST00000515063 RPP25LQ8N5L8 163 aaKnown RBP3□□□□□ -1.93
CAST-242ENST00000515063 CD177Q8N6Q3 437 aa3□□□□□ -1.93
CAST-242ENST00000515063 FDCSPQ8NFU4 85 aa3□□□□□ -1.93
CAST-242ENST00000515063 OR10A7Q8NGE5 316 aa3□□□□□ -1.93
CAST-242ENST00000515063 MRGPRDQ8TDS7 321 aa3□□□□□ -1.93
CAST-242ENST00000515063 LRRC29Q8WV35 223 aa3□□□□□ -1.93
CAST-242ENST00000515063 CORO2AQ92828 525 aa3□□□□□ -1.93
CAST-242ENST00000515063 LHX4Q969G2 390 aa3□□□□□ -1.93
CAST-242ENST00000515063 ISOC2Q96AB3 205 aa3□□□□□ -1.93
CAST-242ENST00000515063 STARD4Q96DR4 205 aa3□□□□□ -1.93
CAST-242ENST00000515063 SDSLQ96GA7 329 aa3□□□□□ -1.93
CAST-242ENST00000515063 C5orf30Q96GV9 206 aa3□□□□□ -1.93
CAST-242ENST00000515063 IMMP2LQ96T52 175 aa3□□□□□ -1.93
CAST-242ENST00000515063 SPXQ9BT56 116 aa3□□□□□ -1.93
CAST-242ENST00000515063 RSG1Q9BU20 258 aa3□□□□□ -1.93
CAST-242ENST00000515063 MCRIP2Q9BUT9 160 aaKnown RBP3□□□□□ -1.93
CAST-242ENST00000515063 SFXN3Q9BWM7 321 aa3□□□□□ -1.93
CAST-242ENST00000515063 OR51M1Q9H341 326 aa3□□□□□ -1.93
CAST-242ENST00000515063 ZNF665Q9H7R5 613 aa3□□□□□ -1.93
CAST-242ENST00000515063 SRD5A3Q9H8P0 318 aa3□□□□□ -1.93
CAST-242ENST00000515063 GNG13Q9P2W3 67 aa3□□□□□ -1.93
CAST-242ENST00000515063 SH3BGRL2Q9UJC5 107 aa3□□□□□ -1.93
CAST-242ENST00000515063 WDR83OSQ9Y284 106 aa3□□□□□ -1.93
CAST-242ENST00000515063 ARL2-SNX15V9GYD0 113 aa3□□□□□ -1.93
CAST-242ENST00000515063 HEATR1Q9H583 2144 aaKnown RBP2.99□□□□□ -1.93
CAST-242ENST00000515063 ATRXP46100 2492 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 DSCAML1Q8TD84 2053 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 USF3Q68DE3 2245 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 HCFC1P51610 2035 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 TRAV9-1A0A075B6T8 112 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 UBE2L5PA0A1B0GUS4 154 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 A4D1N5 150 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 ZNF729A6NN14 1252 aaPredicted RBP2.99□□□□□ -1.93
CAST-242ENST00000515063 CEBPZOSA8MTT3 80 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 C17orf98A8MV24 154 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 INS-IGF2F8WCM5 200 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 PDE6DO43924 150 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 HRASP01112 189 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 KRASP01116 189 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 PFN1P07737 140 aaKnown RBP2.99□□□□□ -1.93
CAST-242ENST00000515063 FGF7P21781 194 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 CD1BP29016 333 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 G6PCP35575 357 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 SRP14P37108 136 aaKnown RBP2.99□□□□□ -1.93
CAST-242ENST00000515063 AKR1C3P42330 323 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 VDAC2P45880 294 aaPredicted RBP2.99□□□□□ -1.93
CAST-242ENST00000515063 CDC34P49427 236 aaPredicted RBP2.99□□□□□ -1.93
CAST-242ENST00000515063 KLF3P57682 345 aaPredicted RBP2.99□□□□□ -1.93
CAST-242ENST00000515063 LCN2P80188 198 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 AESQ08117 197 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 ZNF816Q0VGE8 651 aaPredicted RBP2.99□□□□□ -1.93
CAST-242ENST00000515063 BSXQ3C1V8 233 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 COA6Q5JTJ3 125 aaKnown RBP2.99□□□□□ -1.93
CAST-242ENST00000515063 FFAR4Q5NUL3 377 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 C1orf185Q5T7R7 199 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 PRAMEF6Q5VXH4 476 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 OR8G2PQ6IF36 304 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 FAM71F2Q6NXP2 309 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 LCN15Q6UWW0 184 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 Q6ZS92 163 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 GTSCR1Q86UQ5 136 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 ZFP82Q8N141 532 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 PNKDQ8N490 385 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 CNEP1R1Q8N9A8 125 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 MAPK1IP1LQ8NDC0 245 aa2.99□□□□□ -1.93
CAST-242ENST00000515063 OR10G9Q8NGN4 311 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms