RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 ANKRD34BA5PLL1 514 aa11.61□□□□□ -0.55
NUP54-213ENST00000513352 H3BP45 60 aa11.61□□□□□ -0.55
NUP54-213ENST00000513352 M0QZ24 198 aa11.61□□□□□ -0.55
NUP54-213ENST00000513352 BRI3O95415 125 aa11.61□□□□□ -0.55
NUP54-213ENST00000513352 LGALS1P09382 135 aaKnown RBP11.61□□□□□ -0.55
NUP54-213ENST00000513352 RPP30P78346 268 aaKnown RBP11.61□□□□□ -0.55
NUP54-213ENST00000513352 KIAA0141Q14154 515 aaPredicted RBP11.61□□□□□ -0.55
NUP54-213ENST00000513352 DEFB136Q30KP8 78 aa11.61□□□□□ -0.55
NUP54-213ENST00000513352 LRRC37A5PQ49AS3 106 aa11.61□□□□□ -0.55
NUP54-213ENST00000513352 SPANXN5Q5MJ07 72 aa11.61□□□□□ -0.55
NUP54-213ENST00000513352 NOXA1Q86UR1 476 aa11.61□□□□□ -0.55
NUP54-213ENST00000513352 EEF1AKMT3Q96AZ1 226 aa11.61□□□□□ -0.55
NUP54-213ENST00000513352 DUX3Q96PT4 197 aa11.61□□□□□ -0.55
NUP54-213ENST00000513352 PSENENQ9NZ42 101 aa11.61□□□□□ -0.55
NUP54-213ENST00000513352 U3KQ87 197 aa11.61□□□□□ -0.55
NUP54-213ENST00000513352 MFSD2BA6NFX1 497 aa11.6□□□□□ -0.55
NUP54-213ENST00000513352 ADARB2-AS1A8MUL3 147 aa11.6□□□□□ -0.55
NUP54-213ENST00000513352 K7EPK0 472 aa11.6□□□□□ -0.55
NUP54-213ENST00000513352 CORTO00230 105 aa11.6□□□□□ -0.55
NUP54-213ENST00000513352 PF4P02776 101 aa11.6□□□□□ -0.55
NUP54-213ENST00000513352 IFNA4P05014 189 aa11.6□□□□□ -0.55
NUP54-213ENST00000513352 OR8U8P0C7N1 319 aa11.6□□□□□ -0.55
NUP54-213ENST00000513352 OPRK1P41145 380 aa11.6□□□□□ -0.55
NUP54-213ENST00000513352 H2BFSP57053 126 aa11.6□□□□□ -0.55
NUP54-213ENST00000513352 RRAS2P62070 204 aaPredicted RBP11.6□□□□□ -0.55
NUP54-213ENST00000513352 CYCSP99999 105 aaKnown RBP11.6□□□□□ -0.55
NUP54-213ENST00000513352 RAB32Q13637 225 aa11.6□□□□□ -0.55
NUP54-213ENST00000513352 C2orf83Q53S99 150 aa11.6□□□□□ -0.55
NUP54-213ENST00000513352 OR4F17Q8NGA8 305 aa11.6□□□□□ -0.55
NUP54-213ENST00000513352 CXorf58Q96LI9 332 aa11.6□□□□□ -0.55
NUP54-213ENST00000513352 OR4F4Q96R69 305 aa11.6□□□□□ -0.55
NUP54-213ENST00000513352 RAB40CQ96S21 281 aa11.6□□□□□ -0.55
NUP54-213ENST00000513352 STRAPQ9Y3F4 350 aaKnown RBP11.6□□□□□ -0.55
NUP54-213ENST00000513352 WNK1Q9H4A3 2382 aa11.59□□□□□ -0.55
NUP54-213ENST00000513352 LY86O95711 162 aa11.59□□□□□ -0.55
NUP54-213ENST00000513352 TSPAN15O95858 294 aa11.59□□□□□ -0.55
NUP54-213ENST00000513352 MT-CO2P00403 227 aa11.59□□□□□ -0.55
NUP54-213ENST00000513352 IGHV3-48P01763 117 aa11.59□□□□□ -0.55
NUP54-213ENST00000513352 CXCL3P19876 107 aa11.59□□□□□ -0.55
NUP54-213ENST00000513352 PVALBP20472 110 aaPredicted RBP11.59□□□□□ -0.55
NUP54-213ENST00000513352 BCAP31P51572 246 aa11.59□□□□□ -0.55
NUP54-213ENST00000513352 RAB11AP62491 216 aa11.59□□□□□ -0.55
NUP54-213ENST00000513352 BSXQ3C1V8 233 aa11.59□□□□□ -0.55
NUP54-213ENST00000513352 UBAC2Q8NBM4 344 aa11.59□□□□□ -0.55
NUP54-213ENST00000513352 OR11H7Q8NGC8 314 aa11.59□□□□□ -0.55
NUP54-213ENST00000513352 DPF1Q92782 380 aa11.59□□□□□ -0.55
NUP54-213ENST00000513352 NMES1Q9C002 83 aa11.59□□□□□ -0.55
NUP54-213ENST00000513352 RPS10-NUDT3A0A1W2PQS6 291 aa11.58□□□□□ -0.56
NUP54-213ENST00000513352 C15orf62A8K5M9 175 aa11.58□□□□□ -0.56
NUP54-213ENST00000513352 I3L521 148 aa11.58□□□□□ -0.56
NUP54-213ENST00000513352 K7EIM0 57 aa11.58□□□□□ -0.56
NUP54-213ENST00000513352 RLN2P04090 185 aa11.58□□□□□ -0.56
NUP54-213ENST00000513352 Q56UQ5 140 aa11.58□□□□□ -0.56
NUP54-213ENST00000513352 ZNF343Q6P1L6 599 aa11.58□□□□□ -0.56
NUP54-213ENST00000513352 ACSM6Q6P461 480 aa11.58□□□□□ -0.56
NUP54-213ENST00000513352 CLEC19AQ6UXS0 136 aa11.58□□□□□ -0.56
NUP54-213ENST00000513352 VN1R17PQ8TDU5 208 aa11.58□□□□□ -0.56
NUP54-213ENST00000513352 WDR89Q96FK6 387 aaPredicted RBP11.58□□□□□ -0.56
NUP54-213ENST00000513352 OR4C12Q96R67 309 aa11.58□□□□□ -0.56
NUP54-213ENST00000513352 C21orf62Q9NYP8 219 aa11.58□□□□□ -0.56
NUP54-213ENST00000513352 hCG_2014768A0A024R1R8 64 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 TRBV7-1A0A0A6YYK4 115 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 CCL24O00175 119 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 CAV2P51636 162 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 KLK9Q2XQG4 91 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 ETV3LQ6ZN32 361 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 OR11H1Q8NG94 326 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 OR1N2Q8NGR9 330 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 ZNF502Q8TBZ5 544 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 RNASEH2CQ8TDP1 164 aaKnown RBP11.57□□□□□ -0.56
NUP54-213ENST00000513352 SCARB1Q8WTV0 552 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 TMEM170AQ8WVE7 144 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 PPP1R1CQ8WVI7 109 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 RAX2Q96IS3 184 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 SMIM8Q96KF7 97 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 CCDC140Q96MF4 163 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 ZC4H2Q9NQZ6 224 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 PEF1Q9UBV8 284 aaKnown RBP11.57□□□□□ -0.56
NUP54-213ENST00000513352 KLK9Q9UKQ9 250 aa11.57□□□□□ -0.56
NUP54-213ENST00000513352 IGHV4OR15-8A0A075B7B6 117 aa11.56□□□□□ -0.56
NUP54-213ENST00000513352 A0A087WW49 117 aa11.56□□□□□ -0.56
NUP54-213ENST00000513352 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.56□□□□□ -0.56
NUP54-213ENST00000513352 OR2T8A6NH00 312 aa11.56□□□□□ -0.56
NUP54-213ENST00000513352 LINC01619G3V211 115 aa11.56□□□□□ -0.56
NUP54-213ENST00000513352 I3L2K1 104 aa11.56□□□□□ -0.56
NUP54-213ENST00000513352 TMEM50AO95807 157 aa11.56□□□□□ -0.56
NUP54-213ENST00000513352 TRBV12-3P01733 135 aa11.56□□□□□ -0.56
NUP54-213ENST00000513352 HSPB1P04792 205 aaKnown RBP11.56□□□□□ -0.56
NUP54-213ENST00000513352 PET100P0DJ07 73 aa11.56□□□□□ -0.56
NUP54-213ENST00000513352 GPR183P32249 361 aa11.56□□□□□ -0.56
NUP54-213ENST00000513352 MFAP4P55083 255 aa11.56□□□□□ -0.56
NUP54-213ENST00000513352 ATP5IP56385 69 aaPredicted RBP11.56□□□□□ -0.56
NUP54-213ENST00000513352 TAS2R30P59541 319 aa11.56□□□□□ -0.56
NUP54-213ENST00000513352 RUNX1Q01196 453 aa11.56□□□□□ -0.56
NUP54-213ENST00000513352 ZNF616Q08AN1 781 aa11.56□□□□□ -0.56
NUP54-213ENST00000513352 IL15RAQ13261 267 aa11.56□□□□□ -0.56
NUP54-213ENST00000513352 OR8G2PQ6IF36 304 aa11.56□□□□□ -0.56
NUP54-213ENST00000513352 ZNF436Q9C0F3 470 aaPredicted RBP11.56□□□□□ -0.56
NUP54-213ENST00000513352 PPP5D1E7EU14 171 aa11.55□□□□□ -0.56
NUP54-213ENST00000513352 TSC22D2O75157 780 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms