RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 PTPN23Q9H3S7 1636 aa2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 TRAV7A0A075B6U4 112 aa2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 J3QRE1 110 aa2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 IGKV1-5P01602 117 aa2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 MSMBP08118 114 aa2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 LGALS1P09382 135 aaKnown RBP2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 CYBAP13498 195 aa2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 S100A5P33763 92 aa2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 TEX36Q5VZQ5 186 aa2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 SLC35E3Q7Z769 313 aa2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 CT55Q8WUE5 264 aa2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 TOMM6Q96B49 74 aa2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 BTF3L4Q96K17 158 aa2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 SIGMAR1Q99720 223 aa2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 NMNAT1Q9HAN9 279 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 PZPP20742 1482 aa2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 PLEKHH2Q8IVE3 1493 aa2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 MROH2AA6NES4 1674 aa2.43□□□□□ -2.02
HMGB1P47-201ENST00000511281 WDR90Q96KV7 1748 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 ZNF142P52746 1687 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 ADGBQ8N7X0 1667 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 A2ML1A8K2U0 1454 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 IQSEC2Q5JU85 1478 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 IGKV1D-43A0A0B4J1Z2 117 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 TRAV41A0A0B4J266 112 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 EXOC1LA0A1B0GW35 172 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 IRGMA1A4Y4 181 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 KLRC4O43908 158 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 CREBL2O60519 120 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 SERPINA1P01009 418 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 IGHV3-7P01780 117 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 SMIM10L2AP0DMW4 78 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 SMIM10L2BP0DMW5 78 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 G6PCP35575 357 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 CCR2P41597 374 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 RPL28P46779 137 aaKnown RBP2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 EVX1P49640 407 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 C12orf74Q32Q52 190 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 LIN52Q52LA3 116 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 RPL22L1Q6P5R6 122 aaKnown RBP2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 Q6ZTI0 123 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 RPP25LQ8N5L8 163 aaKnown RBP2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 GDPD1Q8N9F7 314 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 OR10X1Q8NGY0 326 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 SLC7A6Q92536 515 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 DGCR14Q96DF8 476 aaKnown RBP2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 KLF6Q99612 283 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 DERL1Q9BUN8 251 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 TMEM147Q9BVK8 224 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 PTPRSQ13332 1948 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 ALKQ9UM73 1620 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 KDM5DQ9BY66 1539 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 RTEL1-TNFRSF6BF6WH68 1400 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 ZNF532Q9HCE3 1301 aa2.42□□□□□ -2.02
HMGB1P47-201ENST00000511281 MPDZO75970 2070 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 FABP5P3A8MUU1 101 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 FNDC10F2Z333 226 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 H3BT86 120 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 H7C2G1 150 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 PDE6DO43924 150 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 ZNF682O95780 498 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 SERPINA7P05543 415 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 HIST1H2BOP23527 126 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 HLA-DMBP28068 263 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 HIST1H2BBP33778 126 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 HIST1H2BDP58876 126 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 HIST1H2BCP62807 126 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 HBA1P69905 142 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 HIST2H2BEQ16778 126 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 ZNF791Q3KP31 576 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 AADACL3Q5VUY0 350 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 OR51A2Q8NGJ7 313 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 OR51T1Q8NGJ9 327 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 PHOSPHO2Q8TCD6 241 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 HIST1H2BHQ93079 126 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 HIST1H2BNQ99877 126 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 HIST1H2BMQ99879 126 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 CHST6Q9GZX3 395 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 RNASE7Q9H1E1 156 aaKnown RBP2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 TIMM22Q9Y584 194 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 TIMM9Q9Y5J7 89 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 ERBINQ96RT1 1412 aa2.41□□□□□ -2.02
HMGB1P47-201ENST00000511281 MED1Q15648 1581 aaPredicted RBP2.4□□□□□ -2.02
HMGB1P47-201ENST00000511281 VWDEQ8N2E2 1590 aa2.4□□□□□ -2.02
HMGB1P47-201ENST00000511281 UGGT1Q9NYU2 1555 aa2.4□□□□□ -2.02
HMGB1P47-201ENST00000511281 EIF3AQ14152 1382 aaKnown RBP2.4□□□□□ -2.02
HMGB1P47-201ENST00000511281 MROH1Q8NDA8 1641 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 DOCK5Q9H7D0 1870 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 IGHV1-18A0A0C4DH31 117 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 A0A0G2JQZ4 141 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 DPRXA6NFQ7 191 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 FAM159BA6NKW6 160 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 S1PR2O95136 353 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 CRYZL1O95825 349 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 RBP1P09455 135 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 SULT1A3P0DMM9 295 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 SULT1A4P0DMN0 295 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 MSNP26038 577 aaKnown RBP2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 TPRXLQ17RH7 258 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms