RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 GSG1LQ6UXU4 331 aa11.16□□□□□ -0.62
USP11-212ENST00000497179 SLC24A4Q8NFF2 622 aa11.16□□□□□ -0.62
USP11-212ENST00000497179 VN1R17PQ8TDU5 208 aa11.16□□□□□ -0.62
USP11-212ENST00000497179 EEF1AKMT3Q96AZ1 226 aa11.16□□□□□ -0.62
USP11-212ENST00000497179 CXorf58Q96LI9 332 aa11.16□□□□□ -0.62
USP11-212ENST00000497179 C2orf50Q96LR7 162 aa11.16□□□□□ -0.62
USP11-212ENST00000497179 MAGT1Q9H0U3 335 aa11.16□□□□□ -0.62
USP11-212ENST00000497179 IGHV4OR15-8A0A075B7B6 117 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 A0A087WW49 117 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.15□□□□□ -0.62
USP11-212ENST00000497179 I3L2K1 104 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 K7EIM0 57 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 CORTO00230 105 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 GOSR2O14653 212 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 LY86O95711 162 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 PF4P02776 101 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 IAPPP10997 89 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 NPY1RP25929 384 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 ZNF616Q08AN1 781 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 OR11H1Q8NG94 326 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 OR1N2Q8NGR9 330 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 TMEM170AQ8WVE7 144 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 MISP3Q96FF7 219 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 CCDC140Q96MF4 163 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 DUX3Q96PT4 197 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 CIB3Q96Q77 187 aaPredicted RBP11.15□□□□□ -0.62
USP11-212ENST00000497179 GSKIPQ9P0R6 139 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 U3KQ87 197 aa11.15□□□□□ -0.62
USP11-212ENST00000497179 TRBV7-1A0A0A6YYK4 115 aa11.14□□□□□ -0.63
USP11-212ENST00000497179 ANKRD34BA5PLL1 514 aa11.14□□□□□ -0.63
USP11-212ENST00000497179 LINC01619G3V211 115 aa11.14□□□□□ -0.63
USP11-212ENST00000497179 SCGB1D2O95969 90 aa11.14□□□□□ -0.63
USP11-212ENST00000497179 HSPB1P04792 205 aaKnown RBP11.14□□□□□ -0.63
USP11-212ENST00000497179 ATP5IP56385 69 aaPredicted RBP11.14□□□□□ -0.63
USP11-212ENST00000497179 POLR2GP62487 172 aaKnown RBP eCLIP11.14□□□□□ -0.63
USP11-212ENST00000497179 NOXA1Q86UR1 476 aa11.14□□□□□ -0.63
USP11-212ENST00000497179 LINC00482Q8N8I6 264 aa11.14□□□□□ -0.63
USP11-212ENST00000497179 ZNF502Q8TBZ5 544 aa11.14□□□□□ -0.63
USP11-212ENST00000497179 SCARB1Q8WTV0 552 aa11.14□□□□□ -0.63
USP11-212ENST00000497179 DPF1Q92782 380 aa11.14□□□□□ -0.63
USP11-212ENST00000497179 ATP6V0BQ99437 205 aa11.14□□□□□ -0.63
USP11-212ENST00000497179 RANGRFQ9HD47 186 aaPredicted RBP11.14□□□□□ -0.63
USP11-212ENST00000497179 PEF1Q9UBV8 284 aaKnown RBP11.14□□□□□ -0.63
USP11-212ENST00000497179 S4R3C0 116 aa11.14□□□□□ -0.63
USP11-212ENST00000497179 WRBO00258 174 aa11.13□□□□□ -0.63
USP11-212ENST00000497179 SSSCA1O60232 199 aa11.13□□□□□ -0.63
USP11-212ENST00000497179 MT-CO2P00403 227 aa11.13□□□□□ -0.63
USP11-212ENST00000497179 IFNA10P01566 189 aa11.13□□□□□ -0.63
USP11-212ENST00000497179 TRBV12-3P01733 135 aa11.13□□□□□ -0.63
USP11-212ENST00000497179 IGHV3-23P01764 117 aa11.13□□□□□ -0.63
USP11-212ENST00000497179 MBPP02686 304 aaPredicted RBP11.13□□□□□ -0.63
USP11-212ENST00000497179 OR8U8P0C7N1 319 aa11.13□□□□□ -0.63
USP11-212ENST00000497179 IL15RAQ13261 267 aa11.13□□□□□ -0.63
USP11-212ENST00000497179 RNASEH2CQ8TDP1 164 aaKnown RBP11.13□□□□□ -0.63
USP11-212ENST00000497179 C21orf62Q9NYP8 219 aa11.13□□□□□ -0.63
USP11-212ENST00000497179 RCL1Q9Y2P8 373 aaKnown RBP11.13□□□□□ -0.63
USP11-212ENST00000497179 IGHV3-21A0A0B4J1V1 117 aa11.12□□□□□ -0.63
USP11-212ENST00000497179 BMPR1BO00238 502 aa11.12□□□□□ -0.63
USP11-212ENST00000497179 SIX6O95475 246 aa11.12□□□□□ -0.63
USP11-212ENST00000497179 FCGR2BP31994 310 aaPredicted RBP11.12□□□□□ -0.63
USP11-212ENST00000497179 TREML4Q6UXN2 200 aa11.12□□□□□ -0.63
USP11-212ENST00000497179 CLEC19AQ6UXS0 136 aa11.12□□□□□ -0.63
USP11-212ENST00000497179 PINX1Q96BK5 328 aaKnown RBP11.12□□□□□ -0.63
USP11-212ENST00000497179 MGAT4CQ9UBM8 478 aa11.12□□□□□ -0.63
USP11-212ENST00000497179 WNK1Q9H4A3 2382 aa11.11□□□□□ -0.63
USP11-212ENST00000497179 C15orf62A8K5M9 175 aa11.11□□□□□ -0.63
USP11-212ENST00000497179 PPP5D1E7EU14 171 aa11.11□□□□□ -0.63
USP11-212ENST00000497179 F8W735 103 aaPredicted RBP11.11□□□□□ -0.63
USP11-212ENST00000497179 K7EPK0 472 aa11.11□□□□□ -0.63
USP11-212ENST00000497179 TMEM50AO95807 157 aa11.11□□□□□ -0.63
USP11-212ENST00000497179 ZP3P21754 424 aa11.11□□□□□ -0.63
USP11-212ENST00000497179 HOXD3P31249 432 aaPredicted RBP11.11□□□□□ -0.63
USP11-212ENST00000497179 GPR183P32249 361 aa11.11□□□□□ -0.63
USP11-212ENST00000497179 OPRK1P41145 380 aa11.11□□□□□ -0.63
USP11-212ENST00000497179 H2BFSP57053 126 aa11.11□□□□□ -0.63
USP11-212ENST00000497179 TAS2R30P59541 319 aa11.11□□□□□ -0.63
USP11-212ENST00000497179 RPP30P78346 268 aaKnown RBP11.11□□□□□ -0.63
USP11-212ENST00000497179 WFDC9Q8NEX5 89 aa11.11□□□□□ -0.63
USP11-212ENST00000497179 SMIM8Q96KF7 97 aa11.11□□□□□ -0.63
USP11-212ENST00000497179 OR4C12Q96R67 309 aa11.11□□□□□ -0.63
USP11-212ENST00000497179 RAB40CQ96S21 281 aa11.11□□□□□ -0.63
USP11-212ENST00000497179 TXN2Q99757 166 aa11.11□□□□□ -0.63
USP11-212ENST00000497179 NMES1Q9C002 83 aa11.11□□□□□ -0.63
USP11-212ENST00000497179 FNDC4Q9H6D8 234 aaPredicted RBP11.11□□□□□ -0.63
USP11-212ENST00000497179 MGAM2Q2M2H8 2515 aa11.1□□□□□ -0.63
USP11-212ENST00000497179 RPS10-NUDT3A0A1W2PQS6 291 aa11.1□□□□□ -0.63
USP11-212ENST00000497179 H3BP45 60 aa11.1□□□□□ -0.63
USP11-212ENST00000497179 TGOLN2O43493 480 aa11.1□□□□□ -0.63
USP11-212ENST00000497179 ARL3P36405 182 aa11.1□□□□□ -0.63
USP11-212ENST00000497179 SLURP1P55000 103 aa11.1□□□□□ -0.63
USP11-212ENST00000497179 MFAP4P55083 255 aa11.1□□□□□ -0.63
USP11-212ENST00000497179 PAX9P55771 341 aa11.1□□□□□ -0.63
USP11-212ENST00000497179 BSCL2Q96G97 398 aaPredicted RBP11.1□□□□□ -0.63
USP11-212ENST00000497179 MED28Q9H204 178 aa11.1□□□□□ -0.63
USP11-212ENST00000497179 C11orf1Q9H5F2 150 aa11.1□□□□□ -0.63
USP11-212ENST00000497179 GAR1Q9NY12 217 aaKnown RBP11.1□□□□□ -0.63
USP11-212ENST00000497179 PSENENQ9NZ42 101 aa11.1□□□□□ -0.63
USP11-212ENST00000497179 STRAPQ9Y3F4 350 aaKnown RBP11.1□□□□□ -0.63
USP11-212ENST00000497179 LSM5Q9Y4Y9 91 aaKnown RBP11.1□□□□□ -0.63
USP11-212ENST00000497179 TSC22D2O75157 780 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms