RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 REG1AP05451 166 aa9.72□□□□□ -0.85
SNX17-208ENST00000493711 OR8U8P0C7N1 319 aa9.72□□□□□ -0.85
SNX17-208ENST00000493711 APELAP0DMC3 54 aa9.72□□□□□ -0.85
SNX17-208ENST00000493711 RNASE2P10153 161 aaKnown RBP9.72□□□□□ -0.85
SNX17-208ENST00000493711 PF4V1P10720 104 aa9.72□□□□□ -0.85
SNX17-208ENST00000493711 PSMB8P28062 276 aa9.72□□□□□ -0.85
SNX17-208ENST00000493711 P2RY1P47900 373 aa9.72□□□□□ -0.85
SNX17-208ENST00000493711 SRSF2Q01130 221 aaKnown RBP9.72□□□□□ -0.85
SNX17-208ENST00000493711 EXOSC2Q13868 293 aaKnown RBP9.72□□□□□ -0.85
SNX17-208ENST00000493711 KRTAP24-1Q3LI83 254 aa9.72□□□□□ -0.85
SNX17-208ENST00000493711 PVRIGQ6DKI7 326 aa9.72□□□□□ -0.85
SNX17-208ENST00000493711 ETFRF1Q6IPR1 90 aa9.72□□□□□ -0.85
SNX17-208ENST00000493711 SLC25A24Q6NUK1 477 aa9.72□□□□□ -0.85
SNX17-208ENST00000493711 AKAP14Q86UN6 197 aa9.72□□□□□ -0.85
SNX17-208ENST00000493711 OR2T35Q8NGX2 323 aa9.72□□□□□ -0.85
SNX17-208ENST00000493711 WIPF2Q8TF74 440 aaPredicted RBP9.72□□□□□ -0.85
SNX17-208ENST00000493711 SLC25A31Q9H0C2 315 aa9.72□□□□□ -0.85
SNX17-208ENST00000493711 CUBNO60494 3623 aa9.72□□□□□ -0.85
SNX17-208ENST00000493711 SVEP1Q4LDE5 3571 aa9.71□□□□□ -0.85
SNX17-208ENST00000493711 IGLV11-55A0A075B6I3 123 aa9.71□□□□□ -0.86
SNX17-208ENST00000493711 TRBV9A0A0B4J1U6 114 aa9.71□□□□□ -0.86
SNX17-208ENST00000493711 TRGV3P03979 118 aa9.71□□□□□ -0.86
SNX17-208ENST00000493711 NUP62P37198 522 aaPredicted RBP9.71□□□□□ -0.86
SNX17-208ENST00000493711 RAB9AP51151 201 aa9.71□□□□□ -0.86
SNX17-208ENST00000493711 CD83Q01151 205 aa9.71□□□□□ -0.86
SNX17-208ENST00000493711 LRRC37A5PQ49AS3 106 aa9.71□□□□□ -0.86
SNX17-208ENST00000493711 SPANXN5Q5MJ07 72 aa9.71□□□□□ -0.86
SNX17-208ENST00000493711 SAMD5Q5TGI4 173 aa9.71□□□□□ -0.86
SNX17-208ENST00000493711 ZNF329Q86UD4 541 aa9.71□□□□□ -0.86
SNX17-208ENST00000493711 VN1R17PQ8TDU5 208 aa9.71□□□□□ -0.86
SNX17-208ENST00000493711 CXorf58Q96LI9 332 aa9.71□□□□□ -0.86
SNX17-208ENST00000493711 ATP6V0BQ99437 205 aa9.71□□□□□ -0.86
SNX17-208ENST00000493711 C19orf24Q9BVV8 132 aa9.71□□□□□ -0.86
SNX17-208ENST00000493711 LYRM2Q9NU23 88 aaPredicted RBP9.71□□□□□ -0.86
SNX17-208ENST00000493711 GAR1Q9NY12 217 aaKnown RBP9.71□□□□□ -0.86
SNX17-208ENST00000493711 SOX15O60248 233 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 IFNA4P05014 189 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 SLC25A4P12235 298 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 LYL1P12980 280 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 GPX4P36969 197 aaPredicted RBP9.7□□□□□ -0.86
SNX17-208ENST00000493711 CAV2P51636 162 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 PAX9P55771 341 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 TPPP2P59282 170 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 RHOGP84095 191 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 ATP5G2Q06055 141 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 AWAT1Q58HT5 328 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 C11orf87Q6NUJ2 197 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 STX12Q86Y82 276 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 TCTE3Q8IZS6 198 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 CACNG8Q8WXS5 425 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 FANCD2OSQ96PS1 177 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 C11orf1Q9H5F2 150 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 FBXL7Q9UJT9 491 aa9.7□□□□□ -0.86
SNX17-208ENST00000493711 TRBV7-1A0A0A6YYK4 115 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 A0A1B0GVG6 124 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 C15orf62A8K5M9 175 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 SCGB2A1O75556 95 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 TMEM50AO95807 157 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 HBG1P69891 147 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 HBG2P69892 147 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 BAXQ07812 192 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 TMEM14EPQ6UXP3 125 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 ETV3LQ6ZN32 361 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 OR10P1Q8NGE3 313 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 MYOZ3Q8TDC0 251 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 TAF15Q92804 592 aaKnown RBP eCLIP9.69□□□□□ -0.86
SNX17-208ENST00000493711 PINX1Q96BK5 328 aaKnown RBP9.69□□□□□ -0.86
SNX17-208ENST00000493711 MISP3Q96FF7 219 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 WDR89Q96FK6 387 aaPredicted RBP9.69□□□□□ -0.86
SNX17-208ENST00000493711 UBE2E2Q96LR5 201 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 MS4A10Q96PG2 267 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 TXN2Q99757 166 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 RNF126Q9BV68 326 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 GGACTQ9BVM4 153 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 MBD2Q9UBB5 411 aa9.69□□□□□ -0.86
SNX17-208ENST00000493711 PAIP2BQ9ULR5 123 aaKnown RBP9.69□□□□□ -0.86
SNX17-208ENST00000493711 TCRBV4S1A1TA0A5B7 111 aa9.68□□□□□ -0.86
SNX17-208ENST00000493711 H0YIZ8 118 aa9.68□□□□□ -0.86
SNX17-208ENST00000493711 OR2J3O76001 311 aa9.68□□□□□ -0.86
SNX17-208ENST00000493711 CDX1P47902 265 aaPredicted RBP9.68□□□□□ -0.86
SNX17-208ENST00000493711 SULT1A1P50225 295 aa9.68□□□□□ -0.86
SNX17-208ENST00000493711 C15orf32Q32M92 178 aa9.68□□□□□ -0.86
SNX17-208ENST00000493711 ZNF491Q8N8L2 437 aa9.68□□□□□ -0.86
SNX17-208ENST00000493711 INO80EQ8NBZ0 244 aaPredicted RBP9.68□□□□□ -0.86
SNX17-208ENST00000493711 DCUN1D4Q92564 292 aa9.68□□□□□ -0.86
SNX17-208ENST00000493711 EEF1AKMT3Q96AZ1 226 aa9.68□□□□□ -0.86
SNX17-208ENST00000493711 ST6GAL2Q96JF0 529 aa9.68□□□□□ -0.86
SNX17-208ENST00000493711 OR4C12Q96R67 309 aa9.68□□□□□ -0.86
SNX17-208ENST00000493711 RANGRFQ9HD47 186 aaPredicted RBP9.68□□□□□ -0.86
SNX17-208ENST00000493711 OR5AC2Q9NZP5 309 aa9.68□□□□□ -0.86
SNX17-208ENST00000493711 TSSC4Q9Y5U2 329 aaPredicted RBP9.68□□□□□ -0.86
SNX17-208ENST00000493711 TRAV14DV4A0A0A6YYC5 116 aa9.67□□□□□ -0.86
SNX17-208ENST00000493711 FNDC10F2Z333 226 aa9.67□□□□□ -0.86
SNX17-208ENST00000493711 H3BP45 60 aa9.67□□□□□ -0.86
SNX17-208ENST00000493711 I3L2K1 104 aa9.67□□□□□ -0.86
SNX17-208ENST00000493711 MT-CO2P00403 227 aa9.67□□□□□ -0.86
SNX17-208ENST00000493711 PRH1P02810 166 aa9.67□□□□□ -0.86
SNX17-208ENST00000493711 RPL12P30050 165 aaKnown RBP9.67□□□□□ -0.86
SNX17-208ENST00000493711 S100A11P31949 105 aa9.67□□□□□ -0.86
SNX17-208ENST00000493711 OPRK1P41145 380 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms