RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 ZNF114Q8NC26 417 aa12.77□□□□□ -0.37
NUP50-218ENST00000493456 TSPAN14Q8NG11 270 aa12.77□□□□□ -0.37
NUP50-218ENST00000493456 OR5AP2Q8NGF4 316 aa12.77□□□□□ -0.37
NUP50-218ENST00000493456 NDUFAF3Q9BU61 184 aa12.77□□□□□ -0.37
NUP50-218ENST00000493456 TMEM231Q9H6L2 316 aa12.77□□□□□ -0.37
NUP50-218ENST00000493456 X6R8D5 127 aa12.77□□□□□ -0.37
NUP50-218ENST00000493456 A0A0A6YYH2 397 aa12.76□□□□□ -0.37
NUP50-218ENST00000493456 A6NJ64 397 aa12.76□□□□□ -0.37
NUP50-218ENST00000493456 MT-CO2P00403 227 aa12.76□□□□□ -0.37
NUP50-218ENST00000493456 G6PCP35575 357 aa12.76□□□□□ -0.37
NUP50-218ENST00000493456 AQP4P55087 323 aa12.76□□□□□ -0.37
NUP50-218ENST00000493456 SCAND1P57086 179 aa12.76□□□□□ -0.37
NUP50-218ENST00000493456 SFXN4Q6P4A7 337 aa12.76□□□□□ -0.37
NUP50-218ENST00000493456 TOMM20LQ6UXN7 152 aa12.76□□□□□ -0.37
NUP50-218ENST00000493456 FCAMRQ8WWV6 532 aa12.76□□□□□ -0.37
NUP50-218ENST00000493456 RABAC1Q9UI14 185 aa12.76□□□□□ -0.37
NUP50-218ENST00000493456 TBC1D24Q9ULP9 559 aa12.76□□□□□ -0.37
NUP50-218ENST00000493456 TRAV18A0A075B6X5 111 aa12.75□□□□□ -0.37
NUP50-218ENST00000493456 M0R2N4 97 aa12.75□□□□□ -0.37
NUP50-218ENST00000493456 PGLYRP1O75594 196 aaPredicted RBP12.75□□□□□ -0.37
NUP50-218ENST00000493456 APOHP02749 345 aaPredicted RBP12.75□□□□□ -0.37
NUP50-218ENST00000493456 C4BPBP20851 252 aa12.75□□□□□ -0.37
NUP50-218ENST00000493456 FGF9P31371 208 aaPredicted RBP12.75□□□□□ -0.37
NUP50-218ENST00000493456 LPAR6P43657 344 aa12.75□□□□□ -0.37
NUP50-218ENST00000493456 CBX5P45973 191 aa12.75□□□□□ -0.37
NUP50-218ENST00000493456 LILRB2Q8N423 598 aa12.75□□□□□ -0.37
NUP50-218ENST00000493456 GRAMD2BQ96HH9 432 aa12.75□□□□□ -0.37
NUP50-218ENST00000493456 BLOC1S6Q9UL45 172 aa12.75□□□□□ -0.37
NUP50-218ENST00000493456 RRP15Q9Y3B9 282 aaKnown RBP12.75□□□□□ -0.37
NUP50-218ENST00000493456 NPBWR1P48145 328 aa12.74□□□□□ -0.37
NUP50-218ENST00000493456 ZNF600Q6ZNG1 722 aa12.74□□□□□ -0.37
NUP50-218ENST00000493456 CMTM1Q8IZ96 169 aa12.74□□□□□ -0.37
NUP50-218ENST00000493456 ZFAND3Q9H8U3 227 aa12.74□□□□□ -0.37
NUP50-218ENST00000493456 TXNL4BQ9NX01 149 aaKnown RBP12.74□□□□□ -0.37
NUP50-218ENST00000493456 CELA1Q9UNI1 258 aa12.74□□□□□ -0.37
NUP50-218ENST00000493456 IGHV3-66A0A0C4DH42 116 aa12.73□□□□□ -0.37
NUP50-218ENST00000493456 A0A1W2PS18 150 aa12.73□□□□□ -0.37
NUP50-218ENST00000493456 DBX1A6NMT0 343 aa12.73□□□□□ -0.37
NUP50-218ENST00000493456 C12orf74Q32Q52 190 aa12.73□□□□□ -0.37
NUP50-218ENST00000493456 UBE2UQ5VVX9 321 aa12.73□□□□□ -0.37
NUP50-218ENST00000493456 PINX1Q96BK5 328 aaKnown RBP12.73□□□□□ -0.37
NUP50-218ENST00000493456 MOB3AQ96BX8 217 aa12.73□□□□□ -0.37
NUP50-218ENST00000493456 SLC25A38Q96DW6 304 aa12.73□□□□□ -0.37
NUP50-218ENST00000493456 KRTAP4-5Q9BYR2 181 aa12.73□□□□□ -0.37
NUP50-218ENST00000493456 EHFQ9NZC4 300 aa12.73□□□□□ -0.37
NUP50-218ENST00000493456 PUS1Q9Y606 427 aaKnown RBP eCLIP12.73□□□□□ -0.37
NUP50-218ENST00000493456 K7EQG2 157 aa12.72□□□□□ -0.37
NUP50-218ENST00000493456 IGHV3-48P01763 117 aa12.72□□□□□ -0.37
NUP50-218ENST00000493456 FCER2P06734 321 aa12.72□□□□□ -0.37
NUP50-218ENST00000493456 DHRS11Q6UWP2 260 aa12.72□□□□□ -0.37
NUP50-218ENST00000493456 CSNK1G2-AS1Q8NCQ2 148 aa12.72□□□□□ -0.37
NUP50-218ENST00000493456 AUNIPQ9H7T9 357 aa12.72□□□□□ -0.37
NUP50-218ENST00000493456 FAM212BQ9NTI7 297 aaPredicted RBP12.72□□□□□ -0.37
NUP50-218ENST00000493456 LRP1BQ9NZR2 4599 aa12.71□□□□□ -0.37
NUP50-218ENST00000493456 NPPCP23582 126 aa12.71□□□□□ -0.37
NUP50-218ENST00000493456 NPY1RP25929 384 aa12.71□□□□□ -0.37
NUP50-218ENST00000493456 PRCDQ00LT1 54 aa12.71□□□□□ -0.37
NUP50-218ENST00000493456 SOHLH1Q5JUK2 328 aa12.71□□□□□ -0.37
NUP50-218ENST00000493456 STXBP6Q8NFX7 210 aa12.71□□□□□ -0.37
NUP50-218ENST00000493456 OR4A16Q8NH70 328 aa12.71□□□□□ -0.37
NUP50-218ENST00000493456 ZNF2Q9BSG1 426 aaPredicted RBP12.71□□□□□ -0.37
NUP50-218ENST00000493456 IFT46Q9NQC8 304 aa12.71□□□□□ -0.37
NUP50-218ENST00000493456 DIABLOQ9NR28 239 aa12.71□□□□□ -0.37
NUP50-218ENST00000493456 CLEC5AQ9NY25 188 aa12.71□□□□□ -0.37
NUP50-218ENST00000493456 KNCNA6PVL3 124 aa12.7□□□□□ -0.38
NUP50-218ENST00000493456 IFNA10P01566 189 aa12.7□□□□□ -0.38
NUP50-218ENST00000493456 ZNF688P0C7X2 276 aa12.7□□□□□ -0.38
NUP50-218ENST00000493456 ERHP84090 104 aaKnown RBP12.7□□□□□ -0.38
NUP50-218ENST00000493456 KCTD21Q4G0X4 260 aa12.7□□□□□ -0.38
NUP50-218ENST00000493456 ACTL10Q5JWF8 245 aa12.7□□□□□ -0.38
NUP50-218ENST00000493456 ZNF767PQ75MW2 155 aa12.7□□□□□ -0.38
NUP50-218ENST00000493456 OR5H6Q8NGV6 325 aa12.7□□□□□ -0.38
NUP50-218ENST00000493456 PLA2G2EQ9NZK7 142 aa12.7□□□□□ -0.38
NUP50-218ENST00000493456 GPR31O00270 319 aa12.69□□□□□ -0.38
NUP50-218ENST00000493456 IFNA21P01568 189 aa12.69□□□□□ -0.38
NUP50-218ENST00000493456 IFNA17P01571 189 aa12.69□□□□□ -0.38
NUP50-218ENST00000493456 CD74P04233 296 aa12.69□□□□□ -0.38
NUP50-218ENST00000493456 Q6ZR54 194 aa12.69□□□□□ -0.38
NUP50-218ENST00000493456 ZNF575Q86XF7 245 aa12.69□□□□□ -0.38
NUP50-218ENST00000493456 DCANP1Q8TF63 244 aa12.69□□□□□ -0.38
NUP50-218ENST00000493456 METTL26Q96S19 204 aa12.69□□□□□ -0.38
NUP50-218ENST00000493456 C1QTNF4Q9BXJ3 329 aa12.69□□□□□ -0.38
NUP50-218ENST00000493456 A0A1B0GU03 582 aa12.68□□□□□ -0.38
NUP50-218ENST00000493456 MEIS3P1A6NDR6 274 aa12.68□□□□□ -0.38
NUP50-218ENST00000493456 CRYBB3P26998 211 aa12.68□□□□□ -0.38
NUP50-218ENST00000493456 S100GP29377 79 aa12.68□□□□□ -0.38
NUP50-218ENST00000493456 P2RY1P47900 373 aa12.68□□□□□ -0.38
NUP50-218ENST00000493456 RFX2P48378 723 aa12.68□□□□□ -0.38
NUP50-218ENST00000493456 HSPE1P61604 102 aaKnown RBP12.68□□□□□ -0.38
NUP50-218ENST00000493456 H2BFWTQ7Z2G1 175 aa12.68□□□□□ -0.38
NUP50-218ENST00000493456 UBE2DNLQ8IWF7 75 aa12.68□□□□□ -0.38
NUP50-218ENST00000493456 NARS2Q96I59 477 aaKnown RBP12.68□□□□□ -0.38
NUP50-218ENST00000493456 SEC22AQ96IW7 307 aa12.68□□□□□ -0.38
NUP50-218ENST00000493456 FXYD6Q9H0Q3 95 aa12.68□□□□□ -0.38
NUP50-218ENST00000493456 SSR3Q9UNL2 185 aa12.68□□□□□ -0.38
NUP50-218ENST00000493456 AGRNO00468 2067 aa12.68□□□□□ -0.38
NUP50-218ENST00000493456 SCGB2A1O75556 95 aa12.67□□□□□ -0.38
NUP50-218ENST00000493456 TMEM50AO95807 157 aa12.67□□□□□ -0.38
NUP50-218ENST00000493456 SDC2P34741 201 aa12.67□□□□□ -0.38
NUP50-218ENST00000493456 EIF2B2P49770 351 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms