RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CCDC90BQ9GZT6 254 aa14.5□□□□□ -0.09
PDLIM1-202ENST00000477757 NSG2Q9Y328 171 aa14.5□□□□□ -0.09
PDLIM1-202ENST00000477757 K7EQG2 157 aa14.49□□□□□ -0.09
PDLIM1-202ENST00000477757 SCGNO76038 276 aa14.49□□□□□ -0.09
PDLIM1-202ENST00000477757 PTHLHP12272 177 aa14.49□□□□□ -0.09
PDLIM1-202ENST00000477757 MYL9P24844 172 aa14.49□□□□□ -0.09
PDLIM1-202ENST00000477757 NPY1RP25929 384 aa14.49□□□□□ -0.09
PDLIM1-202ENST00000477757 RCN1Q15293 331 aa14.49□□□□□ -0.09
PDLIM1-202ENST00000477757 BEST4Q8NFU0 473 aa14.49□□□□□ -0.09
PDLIM1-202ENST00000477757 FAM210BQ96KR6 192 aa14.49□□□□□ -0.09
PDLIM1-202ENST00000477757 MGLLQ99685 303 aa14.49□□□□□ -0.09
PDLIM1-202ENST00000477757 ZFAND3Q9H8U3 227 aa14.49□□□□□ -0.09
PDLIM1-202ENST00000477757 CASQ2O14958 399 aaPredicted RBP14.48□□□□□ -0.09
PDLIM1-202ENST00000477757 GNG7O60262 68 aa14.48□□□□□ -0.09
PDLIM1-202ENST00000477757 FXYD4P59646 89 aa14.48□□□□□ -0.09
PDLIM1-202ENST00000477757 RNF212Q495C1 297 aa14.48□□□□□ -0.09
PDLIM1-202ENST00000477757 TMEM231Q9H6L2 316 aa14.48□□□□□ -0.09
PDLIM1-202ENST00000477757 PRNDQ9UKY0 176 aa14.48□□□□□ -0.09
PDLIM1-202ENST00000477757 SNAPC5O75971 98 aa14.47□□□□□ -0.09
PDLIM1-202ENST00000477757 MT-CO2P00403 227 aa14.47□□□□□ -0.09
PDLIM1-202ENST00000477757 IGHV3-48P01763 117 aa14.47□□□□□ -0.09
PDLIM1-202ENST00000477757 ZNF688P0C7X2 276 aa14.47□□□□□ -0.09
PDLIM1-202ENST00000477757 ACTL10Q5JWF8 245 aa14.47□□□□□ -0.09
PDLIM1-202ENST00000477757 ZNF114Q8NC26 417 aa14.47□□□□□ -0.09
PDLIM1-202ENST00000477757 STXBP6Q8NFX7 210 aa14.47□□□□□ -0.09
PDLIM1-202ENST00000477757 DUSP21Q9H596 190 aa14.47□□□□□ -0.09
PDLIM1-202ENST00000477757 DBX1A6NMT0 343 aa14.46□□□□□ -0.09
PDLIM1-202ENST00000477757 TMEM17Q86X19 198 aa14.46□□□□□ -0.09
PDLIM1-202ENST00000477757 FKBP11Q9NYL4 201 aa14.46□□□□□ -0.09
PDLIM1-202ENST00000477757 PUS1Q9Y606 427 aaKnown RBP eCLIP14.46□□□□□ -0.09
PDLIM1-202ENST00000477757 DMBT1Q9UGM3 2413 aaPredicted RBP14.46□□□□□ -0.09
PDLIM1-202ENST00000477757 RGS10O43665 173 aa14.45□□□□□ -0.1
PDLIM1-202ENST00000477757 KRASP01116 189 aa14.45□□□□□ -0.1
PDLIM1-202ENST00000477757 F2RP25116 425 aa14.45□□□□□ -0.1
PDLIM1-202ENST00000477757 TNP2Q05952 138 aa14.45□□□□□ -0.1
PDLIM1-202ENST00000477757 ZNF600Q6ZNG1 722 aa14.45□□□□□ -0.1
PDLIM1-202ENST00000477757 HOGA1Q86XE5 327 aa14.45□□□□□ -0.1
PDLIM1-202ENST00000477757 TPRKBQ9Y3C4 175 aa14.45□□□□□ -0.1
PDLIM1-202ENST00000477757 NACAE9PAV3 2078 aa14.45□□□□□ -0.1
PDLIM1-202ENST00000477757 RLN1P04808 185 aa14.44□□□□□ -0.1
PDLIM1-202ENST00000477757 G6PCP35575 357 aa14.44□□□□□ -0.1
PDLIM1-202ENST00000477757 OGFRL1Q5TC84 451 aaPredicted RBP14.44□□□□□ -0.1
PDLIM1-202ENST00000477757 DCANP1Q8TF63 244 aa14.44□□□□□ -0.1
PDLIM1-202ENST00000477757 FCAMRQ8WWV6 532 aa14.44□□□□□ -0.1
PDLIM1-202ENST00000477757 BORCS5Q969J3 196 aa14.44□□□□□ -0.1
PDLIM1-202ENST00000477757 C1QTNF4Q9BXJ3 329 aa14.44□□□□□ -0.1
PDLIM1-202ENST00000477757 SMIM30A4D0T7 59 aa14.43□□□□□ -0.1
PDLIM1-202ENST00000477757 GNRHRP30968 328 aa14.43□□□□□ -0.1
PDLIM1-202ENST00000477757 PINX1Q96BK5 328 aaKnown RBP14.43□□□□□ -0.1
PDLIM1-202ENST00000477757 NDUFB11Q9NX14 153 aa14.43□□□□□ -0.1
PDLIM1-202ENST00000477757 A0A1B0GU03 582 aa14.42□□□□□ -0.1
PDLIM1-202ENST00000477757 A0A1W2PS18 150 aa14.42□□□□□ -0.1
PDLIM1-202ENST00000477757 SPART-AS1P0CW21 52 aa14.42□□□□□ -0.1
PDLIM1-202ENST00000477757 LPAR6P43657 344 aa14.42□□□□□ -0.1
PDLIM1-202ENST00000477757 NPBWR1P48145 328 aa14.42□□□□□ -0.1
PDLIM1-202ENST00000477757 ZNF367Q7RTV3 350 aa14.42□□□□□ -0.1
PDLIM1-202ENST00000477757 TPRA1Q86W33 373 aa14.42□□□□□ -0.1
PDLIM1-202ENST00000477757 TSC22D3Q99576 134 aa14.42□□□□□ -0.1
PDLIM1-202ENST00000477757 SCRT2Q9NQ03 307 aa14.42□□□□□ -0.1
PDLIM1-202ENST00000477757 TRDV1A0A1B0GX56 115 aa14.41□□□□□ -0.1
PDLIM1-202ENST00000477757 NOTOA8MTQ0 251 aa14.41□□□□□ -0.1
PDLIM1-202ENST00000477757 NPPCP23582 126 aa14.41□□□□□ -0.1
PDLIM1-202ENST00000477757 FGF9P31371 208 aaPredicted RBP14.41□□□□□ -0.1
PDLIM1-202ENST00000477757 P2RY1P47900 373 aa14.41□□□□□ -0.1
PDLIM1-202ENST00000477757 HERV-K104P61576 105 aa14.41□□□□□ -0.1
PDLIM1-202ENST00000477757 KCTD21Q4G0X4 260 aa14.41□□□□□ -0.1
PDLIM1-202ENST00000477757 PRSS48Q7RTY5 328 aa14.41□□□□□ -0.1
PDLIM1-202ENST00000477757 RAB40CQ96S21 281 aa14.41□□□□□ -0.1
PDLIM1-202ENST00000477757 TMEM189A5PLL7 270 aa14.4□□□□□ -0.1
PDLIM1-202ENST00000477757 PGLYRP1O75594 196 aaPredicted RBP14.4□□□□□ -0.1
PDLIM1-202ENST00000477757 CRYBB3P26998 211 aa14.4□□□□□ -0.1
PDLIM1-202ENST00000477757 NUTF2P61970 127 aaKnown RBP14.4□□□□□ -0.1
PDLIM1-202ENST00000477757 C22orf42Q6IC83 251 aa14.4□□□□□ -0.1
PDLIM1-202ENST00000477757 TSPAN14Q8NG11 270 aa14.4□□□□□ -0.1
PDLIM1-202ENST00000477757 LGALS14Q8TCE9 139 aa14.4□□□□□ -0.1
PDLIM1-202ENST00000477757 MOB3AQ96BX8 217 aa14.4□□□□□ -0.1
PDLIM1-202ENST00000477757 METTL26Q96S19 204 aa14.4□□□□□ -0.1
PDLIM1-202ENST00000477757 NEU1Q99519 415 aa14.4□□□□□ -0.1
PDLIM1-202ENST00000477757 RHBDL2Q9NX52 303 aa14.4□□□□□ -0.1
PDLIM1-202ENST00000477757 XCL2Q9UBD3 114 aa14.4□□□□□ -0.1
PDLIM1-202ENST00000477757 FAM3BP58499 235 aaPredicted RBP14.39□□□□□ -0.11
PDLIM1-202ENST00000477757 PRCDQ00LT1 54 aa14.39□□□□□ -0.11
PDLIM1-202ENST00000477757 TBCEQ15813 527 aaPredicted RBP14.39□□□□□ -0.11
PDLIM1-202ENST00000477757 PSMG4Q5JS54 123 aa14.39□□□□□ -0.11
PDLIM1-202ENST00000477757 ZNF705AQ6ZN79 300 aaPredicted RBP14.39□□□□□ -0.11
PDLIM1-202ENST00000477757 OR5AP2Q8NGF4 316 aa14.39□□□□□ -0.11
PDLIM1-202ENST00000477757 VCXQ9H320 206 aa14.39□□□□□ -0.11
PDLIM1-202ENST00000477757 TEX48A0A1B0GUV7 120 aa14.38□□□□□ -0.11
PDLIM1-202ENST00000477757 ZNF705FA8MVS1 300 aaPredicted RBP14.38□□□□□ -0.11
PDLIM1-202ENST00000477757 ZNF705DP0CH99 300 aaPredicted RBP14.38□□□□□ -0.11
PDLIM1-202ENST00000477757 ZNF705BP0CI00 300 aaPredicted RBP14.38□□□□□ -0.11
PDLIM1-202ENST00000477757 RNF167Q9H6Y7 350 aa14.38□□□□□ -0.11
PDLIM1-202ENST00000477757 HELTA6NFD8 242 aa14.37□□□□□ -0.11
PDLIM1-202ENST00000477757 TMEM50AO95807 157 aa14.37□□□□□ -0.11
PDLIM1-202ENST00000477757 FCER2P06734 321 aa14.37□□□□□ -0.11
PDLIM1-202ENST00000477757 EMP1P54849 157 aa14.37□□□□□ -0.11
PDLIM1-202ENST00000477757 DKK2Q9UBU2 259 aa14.37□□□□□ -0.11
PDLIM1-202ENST00000477757 DAPK2Q9UIK4 370 aa14.37□□□□□ -0.11
PDLIM1-202ENST00000477757 TRAV18A0A075B6X5 111 aa14.36□□□□□ -0.11
PDLIM1-202ENST00000477757 DHRS2Q13268 280 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms