RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CXCL6P80162 114 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 TNFAIP6P98066 277 aaPredicted RBP2.13□□□□□ -2.07
HMGN4-202ENST00000477243 EMX2Q04743 252 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 REG3AQ06141 175 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 HTR4Q13639 388 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 ELOCQ15369 112 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 GRK1Q15835 563 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 MORN2Q502X0 79 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 C4orf22Q6V702 233 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF584Q8IVC4 421 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 KLHDC8BQ8IXV7 354 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 TMEM75Q8N9X5 138 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 LINC01555Q8NAE3 123 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 NUP35Q8NFH5 326 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 OR13C4Q8NGS5 318 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 OR5H2Q8NGV7 314 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 OR2T4Q8NH00 348 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 OR2T27Q8NH04 317 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 OR52P1PQ8NH57 321 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 GPR119Q8TDV5 335 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 C7orf33Q8WU49 177 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 RTN4IP1Q8WWV3 396 aaPredicted RBP2.13□□□□□ -2.07
HMGN4-202ENST00000477243 APOBEC3DQ96AK3 386 aaPredicted RBP2.13□□□□□ -2.07
HMGN4-202ENST00000477243 REEP6Q96HR9 211 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 CAMK2N2Q96S95 79 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 GGACTQ9BVM4 153 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 MND1Q9BWT6 205 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 TMEM222Q9H0R3 208 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF331Q9NQX6 463 aaPredicted RBP2.13□□□□□ -2.07
HMGN4-202ENST00000477243 MED11Q9P086 117 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 TAC3Q9UHF0 121 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 AK3Q9UIJ7 227 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 HSPB8Q9UJY1 196 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 DNAJC12Q9UKB3 198 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 LAMTOR2Q9Y2Q5 125 aa2.13□□□□□ -2.07
HMGN4-202ENST00000477243 NUP210LQ5VU65 1888 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 IGLV1-50A0A075B6I6 118 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 A0A087WX48 190 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 TRAV4A0A0B4J268 109 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 TMEM269A0A1B0GVZ9 245 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 TMEM72A0PK05 275 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 FAM92AA1XBS5 289 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 C5orf63A6NC05 138 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 OR5H14A6NHG9 310 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 NDUFC2-KCTD14E9PQ53 114 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 MRASO14807 208 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 RGS5O15539 181 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 LMX1BO60663 402 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF354AO60765 605 aaPredicted RBP2.12□□□□□ -2.07
HMGN4-202ENST00000477243 DEDDO75618 318 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 POP7O75817 140 aaKnown RBP2.12□□□□□ -2.07
HMGN4-202ENST00000477243 TNFSF13O75888 250 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF682O95780 498 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 IGHV3-23P01764 117 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 S100A8P05109 93 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 HTR1AP08908 422 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 CRISP2P16562 243 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 CNTFRP26992 372 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 PPP1CCP36873 323 aaKnown RBP2.12□□□□□ -2.07
HMGN4-202ENST00000477243 CXCL12P48061 93 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 MRPS10P82664 201 aaKnown RBP2.12□□□□□ -2.07
HMGN4-202ENST00000477243 HOXC5Q00444 222 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 PSG9Q00887 426 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 COL10A1Q03692 680 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF616Q08AN1 781 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 DAZ2Q13117 558 aaKnown RBP2.12□□□□□ -2.07
HMGN4-202ENST00000477243 CST6Q15828 149 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 ZFP69Q49AA0 526 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 RNASE10Q5GAN6 216 aaKnown RBP2.12□□□□□ -2.07
HMGN4-202ENST00000477243 GLT8D1Q68CQ7 371 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 C11orf87Q6NUJ2 197 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 Q6ZS49 121 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 DAZ4Q86SG3 579 aaKnown RBP2.12□□□□□ -2.07
HMGN4-202ENST00000477243 SGPP2Q8IWX5 399 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 SLC22A24Q8N4F4 322 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 NPBQ8NG41 125 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 OR5P3Q8WZ94 311 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 GNPNAT1Q96EK6 184 aaPredicted RBP2.12□□□□□ -2.07
HMGN4-202ENST00000477243 ABHD14BQ96IU4 210 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 OR2A5Q96R48 311 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF382Q96SR6 550 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 CCL13Q99616 98 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 PAXXQ9BUH6 204 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF471Q9BX82 626 aaPredicted RBP2.12□□□□□ -2.07
HMGN4-202ENST00000477243 KRTAP4-5Q9BYR2 181 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 C20orf27Q9GZN8 174 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 IFI27L2Q9H2X8 130 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 GPR84Q9NQS5 396 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 DAZ1Q9NQZ3 744 aaKnown RBP2.12□□□□□ -2.07
HMGN4-202ENST00000477243 DAZ3Q9NR90 486 aaKnown RBP2.12□□□□□ -2.07
HMGN4-202ENST00000477243 TVP23BQ9NYZ1 205 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF581Q9P0T4 197 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 TAAR3PQ9P1P4 343 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 SLC23A2Q9UGH3 650 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 Q9Y3F1 56 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 RBM7Q9Y580 266 aaKnown RBP2.12□□□□□ -2.07
HMGN4-202ENST00000477243 PTPRFP10586 1907 aa2.12□□□□□ -2.07
HMGN4-202ENST00000477243 PTPRSQ13332 1948 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 HMCN2Q8NDA2 5059 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 TMED7-TICAM2A0A0A6YYA0 188 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms