RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	ZNHIT1	O43257	154 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	TNFRSF6B	O95407	300 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	IGLV3-19	P01714	112 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	CCL2	P13500	99 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	CSRP2	Q16527	193 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	PHLDA1	Q8WV24	401 aa	Predicted RBP	5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	DIDO1	Q9BTC0	2240 aa	Known RBP	5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997		H0YIZ8	118 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	SYNGR3	O43761	229 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	RHOG	P84095	191 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	ASPHD2	Q6ICH7	369 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	GOLT1A	Q6ZVE7	132 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	FAM19A2	Q8N3H0	131 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	OVOL2	Q9BRP0	275 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	IGKV3-7	A0A075B6H7	116 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	GAGE12B	A1L429	117 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	NPFF	O15130	113 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	EFNA2	O43921	213 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	IGHV3-13	P01766	116 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	IGHV3-7	P01780	117 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	LOXL3	P58215	753 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	ZNF146	Q15072	292 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	HEPN1	Q6WQI6	88 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	CLDND2	Q8NHS1	167 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	RNF166	Q96A37	237 aa	Predicted RBP	5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	RNF126	Q9BV68	326 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	GNB1L	Q9BYB4	327 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	OSTC	Q9NRP0	149 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	SHANK1	Q9Y566	2161 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	PCNX3	Q9H6A9	2034 aa		5.18	□□□□□ -1.58
HNRNPU-208	ENST00000475997	NPIPB13	A6NJU9	1138 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	TGFA	P01135	160 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	GPX1	P07203	203 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	TRA2A	Q13595	282 aa	Known RBP eCLIP	5.17	□□□□□ -1.58	1e-14	■■■■□ 24.7
HNRNPU-208	ENST00000475997	TMEM187	Q14656	261 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	RAX2	Q96IS3	184 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	MS4A5	Q9H3V2	200 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	TCF19	Q9Y242	345 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	CD5L	O43866	347 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	FAM159A	Q6UWV7	190 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	FMC1	Q96HJ9	113 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	DIRC2	Q96SL1	478 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	SPSB2	Q99619	263 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997		A0A0C4DFX4	3053 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	KIAA1549L	Q6ZVL6	1849 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	IGHV4-39	P01824	125 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	OR9G9	P0C7N8	305 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	RPL23	P62829	140 aa	Known RBP	5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	IL11RA	Q14626	422 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	KIAA2026	Q5HYC2	2103 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	INO80C	Q6PI98	192 aa	Predicted RBP	5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	TNFRSF14	Q92956	283 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	CHD7	Q9P2D1	2997 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	IGKV1-9	A0A0C4DH69	117 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	TMEM238	C9JI98	176 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	PEX7	O00628	323 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	UMOD	P07911	640 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	SNRPC	P09234	159 aa	Known RBP	5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	SRSF3	P84103	164 aa	Known RBP	5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	CEACAM21	Q3KPI0	293 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	SAXO1	Q8IYX7	474 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	OR52M1	Q8NGK5	317 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	VKORC1	Q9BQB6	163 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	RTBDN	Q9BSG5	229 aa	Predicted RBP	5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	KLF12	Q9Y4X4	402 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	TNFRSF18	Q9Y5U5	241 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	RIF1	Q5UIP0	2472 aa	Known RBP	5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997		A0A0A6YYD4	124 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	TRGV8	A0A0C4DH27	118 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	PLAU	P00749	431 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	AMBP	P02760	352 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	C1QTNF9	P0C862	333 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	LIF	P15018	202 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	SOX8	P57073	446 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	CCL20	P78556	96 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	ORMDL2	Q53FV1	153 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	DCAF10	Q5QP82	559 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	FAM27B	Q5VT28	67 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	GPHA2	Q96T91	129 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	LOXL2	Q9Y4K0	774 aa		5.17	□□□□□ -1.58
HNRNPU-208	ENST00000475997	PCDH15	Q96QU1	1955 aa		5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	TRAV2	A0A0B4J234	112 aa		5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	TRAV24	A0A0B4J272	114 aa		5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997		A6NNC1	897 aa		5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	NBEAP1	P0C6P0	100 aa		5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	HIST1H4A	P62805	103 aa	Known RBP	5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	UNQ5815/PRO19632	Q6UWF5	114 aa		5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	RNASEH2C	Q8TDP1	164 aa	Known RBP	5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	ZNF407	Q9C0G0	2248 aa		5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997		M0R2P5	195 aa		5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	PRTN3	P24158	256 aa		5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	MPV17	P39210	176 aa		5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	TMEM155	Q4W5P6	130 aa		5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	ATP5L2	Q7Z4Y8	100 aa		5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	WFDC3	Q8IUB2	231 aa		5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	ZNF837	Q96EG3	531 aa	Predicted RBP	5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	LOXL4	Q96JB6	756 aa		5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	DNAJC30	Q96LL9	226 aa		5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	NPCDR1	Q9BY65	106 aa		5.16	□□□□□ -1.58
HNRNPU-208	ENST00000475997	TRAV12-3	A0A0B4J271	114 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms