RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 PVRIGQ6DKI7 326 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 OR2T2Q6IF00 324 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 DGAT2L6Q6ZPD8 337 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 Q6ZRU5 148 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 TRPT1Q86TN4 253 aaKnown RBP4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 OR2A1Q8NGT9 310 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 ZNF300Q96RE9 604 aaPredicted RBP4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 SNRNP25Q9BV90 132 aaKnown RBP4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 CCDC167Q9P0B6 97 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 WASHC3Q9Y3C0 194 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 PAM16Q9Y3D7 125 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 KNTC1P50748 2209 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 TRGV10A0A0A0MS01 117 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 KNCNA6PVL3 124 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 K7EP34 96 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 TAX1BP3O14907 124 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 PGLYRP1O75594 196 aaPredicted RBP4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 SIX6O95475 246 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 ATP5G3P48201 142 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 SELENOPP49908 381 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 GSG1Q2KHT4 349 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 TMEM207Q6UWW9 146 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 ZNF441Q8N8Z8 693 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 OR5D16Q8NGK9 328 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 OR4C16Q8NGL9 310 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 RTN4IP1Q8WWV3 396 aaPredicted RBP4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 MBD6Q96DN6 1003 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 PEBP4Q96S96 227 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 PDFQ9HBH1 243 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 NUDT4Q9NZJ9 180 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 EML5Q05BV3 1969 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 CSMD2Q7Z408 3487 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 TRAV8-2A0A0B4J237 113 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 TRBV5-5A0A0J9YX44 114 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 TRDV1A0A1B0GX56 115 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 OR51F1A6NGY5 319 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 LY6LH3BQJ8 138 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 SLC17A2O00624 439 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 CD5LO43866 347 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 ATP1B1P05026 303 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 MMP7P09237 267 aaPredicted RBP4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 P0DMU3 169 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 FAM231AP0DMU4 169 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 FAM231CP0DMU5 169 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 CTSEP14091 401 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 PFN2P35080 140 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 SRP14P37108 136 aaKnown RBP4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 PPICP45877 212 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 RPS10P46783 165 aaKnown RBP4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 EIF3IQ13347 325 aaKnown RBP4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 CD226Q15762 336 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 FAM120AOSQ5T036 256 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 Q6ZUT4 128 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 PTAR1Q7Z6K3 402 aaPredicted RBP4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 SFTPA1Q8IWL2 248 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 C9orf40Q8IXQ3 194 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 ZFP41Q8N8Y5 198 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 OR1J1Q8NGS3 322 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 OR1L3Q8NH93 324 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 SLC25A40Q8TBP6 338 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 IL1F10Q8WWZ1 152 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 KLK6Q92876 244 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 YPEL4Q96NS1 127 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 SPRY4Q9C004 299 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 CLCF1Q9UBD9 225 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 ZNF257Q9Y2Q1 563 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 MPC1Q9Y5U8 109 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 HEBP2Q9Y5Z4 205 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 KMT2CQ8NEZ4 4911 aaKnown RBP4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 TEX48A0A1B0GUV7 120 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 C7orf66A4D0T2 115 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 F6UB75 175 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 KLF7O75840 302 aaPredicted RBP4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 GPANK1O95872 356 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 KRASP01116 189 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 HLA-DRB1P01911 266 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 SEC11BP0C7V7 166 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 CDKN2AP42771 156 aaKnown RBP4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 RPS24P62847 133 aaKnown RBP4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 DAZ2Q13117 558 aaKnown RBP4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 UBE2SQ16763 222 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 PIK3CD-AS1Q5SR53 167 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 LCN12Q6JVE5 192 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 Q6ZWC4 215 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 DAZ4Q86SG3 579 aaKnown RBP4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 LHFPL1Q86WI0 220 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 OR2T6Q8NHC8 308 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 DNAJA3Q96EY1 480 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 TSSK6Q9BXA6 273 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 MRPL20Q9BYC9 149 aaKnown RBP4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 DAZ1Q9NQZ3 744 aaKnown RBP4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 DAZ3Q9NR90 486 aaKnown RBP4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 F5P12259 2224 aa4.87□□□□□ -1.63
SMARCE1-208ENST00000474246 SDK2Q58EX2 2172 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.86□□□□□ -1.631e-10■■■■□ 23.8
SMARCE1-208ENST00000474246 ODAMA1E959 279 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 C15orf62A8K5M9 175 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 HMSDA8MTL9 139 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 EPPINO95925 133 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 CGAP01215 116 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms