RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 HPRT1P00492 218 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 CD74P04233 296 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 HSMCR30P0CW71 290 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 TRAPPC2P0DI81 140 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 TRAPPC2BP0DI82 140 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 NQO2P16083 231 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 C4BPBP20851 252 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 DEFB131AP59861 70 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 PAFAH1B2P68402 229 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 RELQ04864 619 aaPredicted RBP3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 MLLT11Q13015 90 aaPredicted RBP3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 ARL6IP1Q15041 203 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 C12orf74Q32Q52 190 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 CDNFQ49AH0 187 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 Q56UQ5 140 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 TCF24Q7RTU0 167 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 HSD17B13Q7Z5P4 300 aaPredicted RBP3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 TRPT1Q86TN4 253 aaKnown RBP3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 STHQ8IWL8 128 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 MAPKAPK5-AS1Q8N8E1 139 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 OR1L8Q8NGR8 309 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 OR13F1Q8NGS4 319 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 SECTM1Q8WVN6 248 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 ST8SIA2Q92186 375 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 DGCR14Q96DF8 476 aaKnown RBP3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 CMTM3Q96MX0 182 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 NDUFAF3Q9BU61 184 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 MS4A6AQ9H2W1 248 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 PLEKHA2Q9HB19 425 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 CCL28Q9NRJ3 127 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 NDUFA4L2Q9NRX3 87 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 ANXA10Q9UJ72 324 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 IGLV2-18A0A075B6J9 118 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 TRAV14DV4A0A0A6YYC5 116 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 TRAV2A0A0B4J234 112 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 TRAV1-2A0A0B4J238 106 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 IGHV3-66A0A0C4DH42 116 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 MARCH11A6NNE9 402 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 I3L2K1 104 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 ST8SIA3O43173 380 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 YIF1AO95070 293 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 PPYP01298 95 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 APOHP02749 345 aaPredicted RBP3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 CD5P06127 495 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 SPP1P10451 314 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 CATR1Q13166 79 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 TMEM41BQ5BJD5 291 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 Q6ZRM9 215 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 ZNF767PQ75MW2 155 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 Q8N1X5 172 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 CSNK1G2-AS1Q8NCQ2 148 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 DMBX1Q8NFW5 382 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 OR1P1Q8NH06 330 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 OR51H1Q8NH63 302 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 GIMAP1Q8WWP7 306 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 LSM10Q969L4 123 aaKnown RBP3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 NXF2Q9GZY0 626 aaKnown RBP3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 ATG5Q9H1Y0 275 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 VSIRQ9H7M9 311 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 ACOT13Q9NPJ3 140 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 COMMD9Q9P000 198 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 TBC1D24Q9ULP9 559 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 DNAH8Q96JB1 4490 aa3.68□□□□□ -1.82
SNRNP40-204ENST00000474025 KNCNA6PVL3 124 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 KRTAP9-7A8MTY7 169 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 C16orf90A8MZG2 172 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 DNASE2O00115 360 aaPredicted RBP3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 PDCD5O14737 125 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 IFNA10P01566 189 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 IGHV3-48P01763 117 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 EIF4EP06730 217 aaKnown RBP3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 PTHLHP12272 177 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 RAB3BP20337 219 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 FCGR2CP31995 323 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 MFAP4P55083 255 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 GNG2P59768 71 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 ARPC4P59998 168 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 ERVK-16P61578 105 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 CT83Q5H943 113 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 AADACL3Q5VUY0 350 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 UBE2UQ5VVX9 321 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 MORN3Q6PF18 240 aaPredicted RBP3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 TOMM20LQ6UXN7 152 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 ZNF818PQ6ZRF7 136 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 CADM3Q8N126 398 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 SLC25A46Q96AG3 418 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 GRAMD2BQ96HH9 432 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 MGLLQ99685 303 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 TXN2Q99757 166 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 GINS3Q9BRX5 216 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 HINT2Q9BX68 163 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 SLC5A7Q9GZV3 580 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 DUSP21Q9H596 190 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 TMEM14BQ9NUH8 114 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 CLEC5AQ9NY25 188 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 SCN3BQ9NY72 215 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 NSG2Q9Y328 171 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 OR51B2Q9Y5P1 312 aa3.67□□□□□ -1.82
SNRNP40-204ENST00000474025 SMIM30A4D0T7 59 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms