RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 MMD2Q8IY49 270 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 STPG3Q8N7X2 389 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 CYB561D1Q8N8Q1 229 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 OR4A5Q8NH83 315 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 SRSF12Q8WXF0 261 aaKnown RBP4.97□□□□□ -1.61
CLK1-210ENST00000473565 MISP3Q96FF7 219 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 ITPR3Q14573 2671 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 C17orf112F2Z3M2 114 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 CNIH1O95406 144 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 OR10J1P30954 320 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 CEACAM3P40198 252 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 OPRK1P41145 380 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 COMPP49747 757 aaPredicted RBP4.97□□□□□ -1.61
CLK1-210ENST00000473565 KLF17Q5JT82 389 aaPredicted RBP4.97□□□□□ -1.61
CLK1-210ENST00000473565 TEPPQ6URK8 271 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 SLC16A13Q7RTY0 426 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 CBLN2Q8IUK8 224 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 KIR3DL3Q8N743 410 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 LFNGQ8NES3 379 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 MBD3L1Q8WWY6 194 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 AJUBAQ96IF1 538 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 PBDC1Q9BVG4 233 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 SEC11CQ9BY50 192 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 NKX6-2Q9C056 277 aaPredicted RBP4.97□□□□□ -1.61
CLK1-210ENST00000473565 GSX1Q9H4S2 264 aaPredicted RBP4.97□□□□□ -1.61
CLK1-210ENST00000473565 CARHSP1Q9Y2V2 147 aaKnown RBP4.97□□□□□ -1.61
CLK1-210ENST00000473565 NCBP2LA6PVI3 153 aaKnown RBP4.96□□□□□ -1.62
CLK1-210ENST00000473565 TEX22C9J3V5 150 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 FOXH1O75593 365 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 MOSP00540 346 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 CDC34P49427 236 aaPredicted RBP4.96□□□□□ -1.62
CLK1-210ENST00000473565 B2MP61769 119 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 CD69Q07108 199 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 KIAA0141Q14154 515 aaPredicted RBP4.96□□□□□ -1.62
CLK1-210ENST00000473565 C10orf91Q5T1B1 145 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 DPPA3Q6W0C5 159 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 COMMD1Q8N668 190 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 ABHD5Q8WTS1 349 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 NPIPB3Q92617 1050 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 GGACTQ9BVM4 153 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 UNKLQ9H9P5 680 aaKnown RBP4.96□□□□□ -1.62
CLK1-210ENST00000473565 SEPSECSQ9HD40 501 aaKnown RBP4.96□□□□□ -1.62
CLK1-210ENST00000473565 DMRT1Q9Y5R6 373 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 S4R3C0 116 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 CENPVL3A0A0U1RRI6 287 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 CTXND1A0A1B0GTU2 59 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 LOC102723971A0A1B0GUV8 181 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 A0A1W2PN81 502 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 VWC2LB2RUY7 222 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 NBR2O15453 112 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 LY86O95711 162 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 HBE1P02100 147 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 SRP19P09132 144 aaKnown RBP4.96□□□□□ -1.62
CLK1-210ENST00000473565 CHRNA7P36544 502 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 UBE2G2P60604 165 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 NDPQ00604 133 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 C1orf122Q6ZSJ8 110 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 SVBPQ8N300 66 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 ACTR3CQ9C0K3 210 aaPredicted RBP4.96□□□□□ -1.62
CLK1-210ENST00000473565 SLC35B3Q9H1N7 401 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 DOK5Q9P104 306 aa4.96□□□□□ -1.62
CLK1-210ENST00000473565 PUS1Q9Y606 427 aaKnown RBP eCLIP4.96□□□□□ -1.62
CLK1-210ENST00000473565 SONP18583 2426 aaKnown RBP4.96□□□□□ -1.62
CLK1-210ENST00000473565 FLNAP21333 2647 aaKnown RBP4.95□□□□□ -1.62
CLK1-210ENST00000473565 TRAV1-1A0A0B4J248 108 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 TRAV40A0A0B4J280 105 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 BTBD17A6NE02 478 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 DNASE2O00115 360 aaPredicted RBP4.95□□□□□ -1.62
CLK1-210ENST00000473565 TSPAN4O14817 238 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 SNRPCP09234 159 aaKnown RBP4.95□□□□□ -1.62
CLK1-210ENST00000473565 IGHV4-38-2P0DP08 117 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 BCL2P10415 239 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 RND2P52198 227 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 ZNF90Q03938 601 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 ACOT6Q3I5F7 207 aaPredicted RBP4.95□□□□□ -1.62
CLK1-210ENST00000473565 ZNF506Q5JVG8 444 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 FASNP49327 2511 aaKnown RBP4.95□□□□□ -1.62
CLK1-210ENST00000473565 PRRC2AP48634 2157 aaKnown RBP4.95□□□□□ -1.62
CLK1-210ENST00000473565 M0R036 132 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 LINC00869P0C866 280 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 UBE2E1P51965 193 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 HABP2Q14520 560 aaPredicted RBP4.95□□□□□ -1.62
CLK1-210ENST00000473565 FXYD3Q14802 87 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 SOHLH1Q5JUK2 328 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 SLC35E1Q96K37 410 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 SLC25A33Q9BSK2 321 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 UNC79Q9P2D8 2635 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 A0A1W2PPV4 95 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 NPFFO15130 113 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 CYB5BO43169 146 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 MPDU1O75352 247 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 MBP02144 154 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 ARL14EPLP0DKL9 152 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 TMEM11P17152 192 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 CLEC12BQ2HXU8 276 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 C5orf64Q2M2E5 130 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 AWAT1Q58HT5 328 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 MORN5Q5VZ52 161 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 MIR17HGQ75NE6 70 aa4.95□□□□□ -1.62
CLK1-210ENST00000473565 TMEM144Q7Z5S9 345 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms