RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 S100ZQ8WXG8 99 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 SLC25A46Q96AG3 418 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 ATP6V0BQ99437 205 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 S100A13Q99584 98 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 TBX5Q99593 518 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 BCL7BQ9BQE9 202 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 SDHAF2Q9NX18 166 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 IMPAD1Q9NX62 359 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 BABAM2Q9NXR7 383 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 DAPK2Q9UIK4 370 aa4.18□□□□□ -1.74
HDAC3-206ENST00000471968 TIMM8BQ9Y5J9 83 aaPredicted RBP4.18□□□□□ -1.74
HDAC3-206ENST00000471968 TRAV26-2A0A0B4J265 109 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 SNTNA6NMZ2 147 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 NOTOA8MTQ0 251 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 FAM90A26D6RGX4 464 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 CYB5BO43169 146 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 KBTBD11O94819 623 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 ELK1P19419 428 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 PRKACGP22612 351 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 GATA2P23769 480 aaPredicted RBP4.17□□□□□ -1.74
HDAC3-206ENST00000471968 PSG9Q00887 426 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 KDM4DQ6B0I6 523 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 C9orf47Q6ZRZ4 202 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 OR5D14Q8NGL3 314 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 OR13F1Q8NGS4 319 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 SETD6Q8TBK2 473 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 PTX4Q96A99 478 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 NRBF2Q96F24 287 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 MRPL48Q96GC5 212 aaKnown RBP4.17□□□□□ -1.74
HDAC3-206ENST00000471968 NIPSNAP1Q9BPW8 284 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 NXF2Q9GZY0 626 aaKnown RBP4.17□□□□□ -1.74
HDAC3-206ENST00000471968 OR2D2Q9H210 308 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 RIBC2Q9H4K1 309 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 DIABLOQ9NR28 239 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 PAK1IP1Q9NWT1 392 aaPredicted RBP4.17□□□□□ -1.74
HDAC3-206ENST00000471968 KLK11Q9UBX7 282 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 GMPPBQ9Y5P6 360 aa4.17□□□□□ -1.74
HDAC3-206ENST00000471968 TCRBV3S1A0A5B6 114 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 IGLC7A0M8Q6 106 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 GAGE12BA1L429 117 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 METTL15A6NJ78 407 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 K7EIM0 57 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 GAGE7O76087 117 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 GLAP06280 429 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 GAGE12FP0CL80 117 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 GAGE12GP0CL81 117 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 GAGE12IP0CL82 117 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 TNFSF8P32971 234 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 NKX2-1P43699 371 aaPredicted RBP4.16□□□□□ -1.74
HDAC3-206ENST00000471968 GNG2P59768 71 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 ARFRP1Q13795 201 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 MORN5Q5VZ52 161 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 AKAP14Q86UN6 197 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 GID4Q8IVV7 300 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 SLC7A5P1Q8MH63 180 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 OR51A2Q8NGJ7 313 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 SUN5Q8TC36 379 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 RFKQ969G6 155 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 TRIM63Q969Q1 353 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 C5orf30Q96GV9 206 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 IGF2BP2-AS1Q96M15 143 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 ABHD1Q96SE0 405 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 JAM3Q9BX67 310 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 TMPRSS5Q9H3S3 457 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 SAV1Q9H4B6 383 aaPredicted RBP4.16□□□□□ -1.74
HDAC3-206ENST00000471968 FKBP14Q9NWM8 211 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 CLN6Q9NWW5 311 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 ICOSQ9Y6W8 199 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 KIF25-AS1Q9Y6Z4 181 aa4.16□□□□□ -1.74
HDAC3-206ENST00000471968 LOC105371267A0A1B0GV96 52 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 SAC3D1A6NKF1 404 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 IBA57-AS1B1ANH7 110 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 HTN1P15515 57 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 RAB3AP20336 220 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 NPPCP23582 126 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 S100A5P33763 92 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 SERPINB10P48595 397 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 RORCP51449 518 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 RPL8P62917 257 aaKnown RBP4.15□□□□□ -1.75
HDAC3-206ENST00000471968 DDI2Q5TDH0 399 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 TMEM236Q5W0B7 351 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 HS3ST5Q8IZT8 346 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 GDPD1Q8N9F7 314 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 OR2G2Q8NGZ5 317 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 BAALCQ8WXS3 180 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 CENPNQ96H22 339 aaPredicted RBP4.15□□□□□ -1.75
HDAC3-206ENST00000471968 ZNF486Q96H40 463 aaPredicted RBP4.15□□□□□ -1.75
HDAC3-206ENST00000471968 TM2D2Q9BX73 214 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 ZFAND3Q9H8U3 227 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 ERVK13-1Q9NX77 482 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 RDH8Q9NYR8 311 aa4.15□□□□□ -1.75
HDAC3-206ENST00000471968 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.15□□□□□ -1.75
HDAC3-206ENST00000471968 FAM25AB3EWG3 89 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 FAM25CB3EWG5 89 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 FAM25GB3EWG6 89 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 H7C1H1 209 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 PHOX2AO14813 284 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 FCGR3BO75015 233 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 ZNF780AO75290 641 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms