RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 PRCDQ00LT1 54 aa9.8□□□□□ -0.84
CPSF4-210ENST00000469897 OR10C1Q96KK4 312 aa9.8□□□□□ -0.84
CPSF4-210ENST00000469897 CMTM3Q96MX0 182 aa9.8□□□□□ -0.84
CPSF4-210ENST00000469897 NXF2Q9GZY0 626 aaKnown RBP9.8□□□□□ -0.84
CPSF4-210ENST00000469897 CSTL1Q9H114 145 aa9.8□□□□□ -0.84
CPSF4-210ENST00000469897 PLECQ15149 4684 aaKnown RBP9.79□□□□□ -0.84
CPSF4-210ENST00000469897 GNG7O60262 68 aa9.79□□□□□ -0.84
CPSF4-210ENST00000469897 PI3P19957 117 aa9.79□□□□□ -0.84
CPSF4-210ENST00000469897 CMC4P56277 68 aaPredicted RBP9.79□□□□□ -0.84
CPSF4-210ENST00000469897 RNASE12Q5GAN4 147 aaKnown RBP9.79□□□□□ -0.84
CPSF4-210ENST00000469897 FAM90A2PQ658T7 463 aa9.79□□□□□ -0.84
CPSF4-210ENST00000469897 TOMM20LQ6UXN7 152 aa9.79□□□□□ -0.84
CPSF4-210ENST00000469897 LILRB2Q8N423 598 aa9.79□□□□□ -0.84
CPSF4-210ENST00000469897 KLK11Q9UBX7 282 aa9.79□□□□□ -0.84
CPSF4-210ENST00000469897 A0A0B4J293 547 aa9.78□□□□□ -0.84
CPSF4-210ENST00000469897 NUPR2A6NF83 97 aa9.78□□□□□ -0.84
CPSF4-210ENST00000469897 FAM25AB3EWG3 89 aa9.78□□□□□ -0.84
CPSF4-210ENST00000469897 FAM25CB3EWG5 89 aa9.78□□□□□ -0.84
CPSF4-210ENST00000469897 FAM25GB3EWG6 89 aa9.78□□□□□ -0.84
CPSF4-210ENST00000469897 TNFAIP8O95379 198 aa9.78□□□□□ -0.84
CPSF4-210ENST00000469897 APOHP02749 345 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-210ENST00000469897 PGAM2P15259 253 aa9.78□□□□□ -0.84
CPSF4-210ENST00000469897 RORCP51449 518 aa9.78□□□□□ -0.84
CPSF4-210ENST00000469897 ZNF114Q8NC26 417 aa9.78□□□□□ -0.84
CPSF4-210ENST00000469897 C6orf62Q9GZU0 229 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-210ENST00000469897 IGHV3-66A0A0C4DH42 116 aa9.77□□□□□ -0.85
CPSF4-210ENST00000469897 MPTX1A8MV57 137 aa9.77□□□□□ -0.85
CPSF4-210ENST00000469897 TMEM50AO95807 157 aa9.77□□□□□ -0.85
CPSF4-210ENST00000469897 IGKV1-5P01602 117 aa9.77□□□□□ -0.85
CPSF4-210ENST00000469897 SNCAP37840 140 aa9.77□□□□□ -0.85
CPSF4-210ENST00000469897 ETV6P41212 452 aa9.77□□□□□ -0.85
CPSF4-210ENST00000469897 PAFAH1B2P68402 229 aa9.77□□□□□ -0.85
CPSF4-210ENST00000469897 MLANAQ16655 118 aa9.77□□□□□ -0.85
CPSF4-210ENST00000469897 SP6Q3SY56 376 aa9.77□□□□□ -0.85
CPSF4-210ENST00000469897 TCF24Q7RTU0 167 aa9.77□□□□□ -0.85
CPSF4-210ENST00000469897 TMEM217Q8N7C4 229 aa9.77□□□□□ -0.85
CPSF4-210ENST00000469897 DUSP18Q8NEJ0 188 aa9.77□□□□□ -0.85
CPSF4-210ENST00000469897 TP53RKQ96S44 253 aa9.77□□□□□ -0.85
CPSF4-210ENST00000469897 RARRES2Q99969 163 aa9.77□□□□□ -0.85
CPSF4-210ENST00000469897 KLK5Q9Y337 293 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-210ENST00000469897 ST8SIA3O43173 380 aa9.76□□□□□ -0.85
CPSF4-210ENST00000469897 DFFBO76075 338 aa9.76□□□□□ -0.85
CPSF4-210ENST00000469897 IFNA17P01571 189 aa9.76□□□□□ -0.85
CPSF4-210ENST00000469897 CD3DP04234 171 aa9.76□□□□□ -0.85
CPSF4-210ENST00000469897 NPBWR1P48145 328 aa9.76□□□□□ -0.85
CPSF4-210ENST00000469897 PIGPP57054 158 aa9.76□□□□□ -0.85
CPSF4-210ENST00000469897 RPL11P62913 178 aaKnown RBP9.76□□□□□ -0.85
CPSF4-210ENST00000469897 RNASE10Q5GAN6 216 aaKnown RBP9.76□□□□□ -0.85
CPSF4-210ENST00000469897 OR52I2Q8NH67 350 aa9.76□□□□□ -0.85
CPSF4-210ENST00000469897 PHLDA1Q8WV24 401 aaPredicted RBP9.76□□□□□ -0.85
CPSF4-210ENST00000469897 ST8SIA2Q92186 375 aa9.76□□□□□ -0.85
CPSF4-210ENST00000469897 PUS1Q9Y606 427 aaKnown RBP eCLIP9.76□□□□□ -0.85
CPSF4-210ENST00000469897 C3orf85A0A1B0GTC6 90 aa9.75□□□□□ -0.85
CPSF4-210ENST00000469897 A0A1B0GU03 582 aa9.75□□□□□ -0.85
CPSF4-210ENST00000469897 DNASE2O00115 360 aaPredicted RBP9.75□□□□□ -0.85
CPSF4-210ENST00000469897 ATF4P18848 351 aaPredicted RBP9.75□□□□□ -0.85
CPSF4-210ENST00000469897 RND3P61587 244 aa9.75□□□□□ -0.85
CPSF4-210ENST00000469897 MZT2AQ6P582 158 aa9.75□□□□□ -0.85
CPSF4-210ENST00000469897 LHFPL1Q86WI0 220 aa9.75□□□□□ -0.85
CPSF4-210ENST00000469897 ZNF486Q96H40 463 aaPredicted RBP9.75□□□□□ -0.85
CPSF4-210ENST00000469897 ABHD1Q96SE0 405 aa9.75□□□□□ -0.85
CPSF4-210ENST00000469897 GINS3Q9BRX5 216 aa9.75□□□□□ -0.85
CPSF4-210ENST00000469897 MS4A6AQ9H2W1 248 aa9.75□□□□□ -0.85
CPSF4-210ENST00000469897 ALMS1Q8TCU4 4167 aa9.74□□□□□ -0.85
CPSF4-210ENST00000469897 P0C879 139 aa9.74□□□□□ -0.85
CPSF4-210ENST00000469897 AKR1C2P52895 323 aa9.74□□□□□ -0.85
CPSF4-210ENST00000469897 SUB1P53999 127 aaKnown RBP eCLIP9.74□□□□□ -0.855e-6■■■■■ 28.3
CPSF4-210ENST00000469897 DEFB131AP59861 70 aa9.74□□□□□ -0.85
CPSF4-210ENST00000469897 TRIM16LQ309B1 348 aa9.74□□□□□ -0.85
CPSF4-210ENST00000469897 LEMD1Q68G75 181 aa9.74□□□□□ -0.85
CPSF4-210ENST00000469897 PVRIGQ6DKI7 326 aa9.74□□□□□ -0.85
CPSF4-210ENST00000469897 ZNF600Q6ZNG1 722 aa9.74□□□□□ -0.85
CPSF4-210ENST00000469897 FAM24BQ8N5W8 94 aa9.74□□□□□ -0.85
CPSF4-210ENST00000469897 SLC35G3Q8N808 338 aa9.74□□□□□ -0.85
CPSF4-210ENST00000469897 OR4D10Q8NGI6 311 aa9.74□□□□□ -0.85
CPSF4-210ENST00000469897 OR11H2Q8NH07 326 aa9.74□□□□□ -0.85
CPSF4-210ENST00000469897 NAA50Q9GZZ1 169 aaKnown RBP9.74□□□□□ -0.85
CPSF4-210ENST00000469897 VSIRQ9H7M9 311 aa9.74□□□□□ -0.85
CPSF4-210ENST00000469897 ZFAND3Q9H8U3 227 aa9.74□□□□□ -0.85
CPSF4-210ENST00000469897 EXTL2Q9UBQ6 330 aa9.74□□□□□ -0.85
CPSF4-210ENST00000469897 A0A0G2JRQ6 117 aa9.73□□□□□ -0.85
CPSF4-210ENST00000469897 INS-IGF2F8WCM5 200 aa9.73□□□□□ -0.85
CPSF4-210ENST00000469897 DEFB4AO15263 64 aa9.73□□□□□ -0.85
CPSF4-210ENST00000469897 ATG12O94817 140 aa9.73□□□□□ -0.85
CPSF4-210ENST00000469897 CD5P06127 495 aa9.73□□□□□ -0.85
CPSF4-210ENST00000469897 RNASE2P10153 161 aaKnown RBP9.73□□□□□ -0.85
CPSF4-210ENST00000469897 ZNF182P17025 639 aaPredicted RBP9.73□□□□□ -0.85
CPSF4-210ENST00000469897 NPPCP23582 126 aa9.73□□□□□ -0.85
CPSF4-210ENST00000469897 PPP5CP53041 499 aa9.73□□□□□ -0.85
CPSF4-210ENST00000469897 NANOS2P60321 138 aaKnown RBP9.73□□□□□ -0.85
CPSF4-210ENST00000469897 SCGB2B2Q4G0G5 96 aa9.73□□□□□ -0.85
CPSF4-210ENST00000469897 Q6ZRM9 215 aa9.73□□□□□ -0.85
CPSF4-210ENST00000469897 ARRDC1Q8N5I2 433 aa9.73□□□□□ -0.85
CPSF4-210ENST00000469897 RPP25LQ8N5L8 163 aaKnown RBP9.73□□□□□ -0.85
CPSF4-210ENST00000469897 TERB2Q8NHR7 220 aa9.73□□□□□ -0.85
CPSF4-210ENST00000469897 C11orf45Q8TAV5 145 aa9.73□□□□□ -0.85
CPSF4-210ENST00000469897 GATAD1Q8WUU5 269 aa9.73□□□□□ -0.85
CPSF4-210ENST00000469897 PDCD10Q9BUL8 212 aa9.73□□□□□ -0.85
CPSF4-210ENST00000469897 MRPL36Q9P0J6 103 aaKnown RBP9.73□□□□□ -0.85
CPSF4-210ENST00000469897 COPZ2Q9P299 210 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms