RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 STPG4Q8N801 248 aa7.88□□□□□ -1.15
HDAC3-205ENST00000469550 OR2D3Q8NGH3 330 aa7.88□□□□□ -1.15
HDAC3-205ENST00000469550 OR5B3Q8NH48 314 aa7.88□□□□□ -1.15
HDAC3-205ENST00000469550 MS4A5Q9H3V2 200 aa7.88□□□□□ -1.15
HDAC3-205ENST00000469550 RNF114Q9Y508 228 aa7.88□□□□□ -1.15
HDAC3-205ENST00000469550 MBD3L4A6NDZ8 208 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-205ENST00000469550 MBD3L3A6NE82 208 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-205ENST00000469550 MBD3L5A6NJ08 208 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-205ENST00000469550 NKX6-3A6NJ46 265 aa7.87□□□□□ -1.15
HDAC3-205ENST00000469550 LINC00473A8K010 186 aa7.87□□□□□ -1.15
HDAC3-205ENST00000469550 K7EP13 123 aa7.87□□□□□ -1.15
HDAC3-205ENST00000469550 PSPNO60542 156 aa7.87□□□□□ -1.15
HDAC3-205ENST00000469550 ZNF324O75467 553 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-205ENST00000469550 HLA-DQA1P01909 254 aa7.87□□□□□ -1.15
HDAC3-205ENST00000469550 OR9G9P0C7N8 305 aa7.87□□□□□ -1.15
HDAC3-205ENST00000469550 HNRNPA3P51991 378 aaKnown RBP7.87□□□□□ -1.15
HDAC3-205ENST00000469550 PMCHL1Q16048 86 aa7.87□□□□□ -1.15
HDAC3-205ENST00000469550 MORN2Q502X0 79 aa7.87□□□□□ -1.15
HDAC3-205ENST00000469550 MIC13Q5XKP0 118 aa7.87□□□□□ -1.15
HDAC3-205ENST00000469550 OR8I2Q8N0Y5 310 aa7.87□□□□□ -1.15
HDAC3-205ENST00000469550 PNKDQ8N490 385 aa7.87□□□□□ -1.15
HDAC3-205ENST00000469550 MBD3L2Q8NHZ7 208 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-205ENST00000469550 NANOS1Q8WY41 292 aaKnown RBP7.87□□□□□ -1.15
HDAC3-205ENST00000469550 TXN2Q99757 166 aa7.87□□□□□ -1.15
HDAC3-205ENST00000469550 JKAMPQ9P055 326 aa7.87□□□□□ -1.15
HDAC3-205ENST00000469550 MRPL27Q9P0M9 148 aaKnown RBP7.87□□□□□ -1.15
HDAC3-205ENST00000469550 SLC25A10Q9UBX3 287 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-205ENST00000469550 NAT8BQ9UHF3 227 aa7.87□□□□□ -1.15
HDAC3-205ENST00000469550 CDC42EP3Q9UKI2 254 aa7.87□□□□□ -1.15
HDAC3-205ENST00000469550 DOCK7Q96N67 2140 aa7.87□□□□□ -1.15
HDAC3-205ENST00000469550 DPRXA6NFQ7 191 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 FNDC10F2Z333 226 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 ISLRO14498 428 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 HNF1AP20823 631 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 ZNF83P51522 516 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 UBE2V1Q13404 147 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 EFNB3Q15768 340 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 C21orf62-AS1Q17RA5 79 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 SPINK9Q5DT21 86 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 SAPCD1Q5SSQ6 148 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 LEMD1Q68G75 181 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 Q6ZN92 141 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 HELTA6NFD8 242 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 AMY1AP04745 511 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 ADH4P08319 380 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 C3orf79P0CE67 100 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 GNG4P50150 75 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 PTTG1IPP53801 180 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 RBX1P62877 108 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 FOXF2Q12947 444 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 RAB31Q13636 194 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 TRAT1Q6PIZ9 186 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 RASL11AQ6T310 242 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 NIT1Q86X76 327 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 GCNT2Q8N0V5 402 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 OR4A16Q8NH70 328 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 BCL2L2Q92843 193 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-205ENST00000469550 C1orf159Q96HA4 380 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 FAM103A1Q9BTL3 118 aaKnown RBP7.86□□□□□ -1.15
HDAC3-205ENST00000469550 HEYLQ9NQ87 328 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-205ENST00000469550 TMEM167BQ9NRX6 74 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 IL19Q9UHD0 177 aa7.86□□□□□ -1.15
HDAC3-205ENST00000469550 DOCK11Q5JSL3 2073 aa7.85□□□□□ -1.15
HDAC3-205ENST00000469550 SMIM27A0A1W2PRY6 76 aa7.85□□□□□ -1.15
HDAC3-205ENST00000469550 CCL25O15444 150 aa7.85□□□□□ -1.15
HDAC3-205ENST00000469550 FRMD6-AS1P0C7T7 363 aa7.85□□□□□ -1.15
HDAC3-205ENST00000469550 DUTP33316 252 aaKnown RBP7.85□□□□□ -1.15
HDAC3-205ENST00000469550 TBC1D28Q2M2D7 210 aa7.85□□□□□ -1.15
HDAC3-205ENST00000469550 TEPPQ6URK8 271 aa7.85□□□□□ -1.15
HDAC3-205ENST00000469550 C22orf15Q8WYQ4 148 aa7.85□□□□□ -1.15
HDAC3-205ENST00000469550 CORO2AQ92828 525 aa7.85□□□□□ -1.15
HDAC3-205ENST00000469550 COQ2Q96H96 371 aa7.85□□□□□ -1.15
HDAC3-205ENST00000469550 SEPSECSQ9HD40 501 aaKnown RBP7.85□□□□□ -1.15
HDAC3-205ENST00000469550 SLC35D1Q9NTN3 355 aa7.85□□□□□ -1.15
HDAC3-205ENST00000469550 BET1LQ9NYM9 111 aa7.85□□□□□ -1.15
HDAC3-205ENST00000469550 IQCF6A8MYZ5 107 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 BMPR1BO00238 502 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 TSPOP30536 169 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 CDKN1BP46527 198 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 GNG10P50151 68 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 SELENOVP59797 346 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 PRR20EP86478 221 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 PRR20CP86479 221 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 PRR20DP86480 221 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 PRR20BP86481 221 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 PRR20AP86496 221 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 SRYQ05066 204 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 AESQ08117 197 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 TIGITQ495A1 244 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 CENPWQ5EE01 88 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 PRAMEF5Q5TYX0 476 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 PRAMEF6Q5VXH4 476 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 STPG3Q8N7X2 389 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 ZNF738Q8NE65 137 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 WIPF2Q8TF74 440 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-205ENST00000469550 TSKUQ8WUA8 353 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 BORCS7Q96B45 105 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 COX11Q9Y6N1 276 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 HRNRQ86YZ3 2850 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-205ENST00000469550 IGHV2-26A0A0B4J1V2 119 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms