RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 BPIFA4PQ86YQ2 179 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 SYT8Q8NBV8 401 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 NANOS1Q8WY41 292 aaKnown RBP4.86□□□□□ -1.63
CLK1-207ENST00000461981 NEIL1Q96FI4 390 aaPredicted RBP4.86□□□□□ -1.63
CLK1-207ENST00000461981 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.86□□□□□ -1.63
CLK1-207ENST00000461981 OR1A1Q9P1Q5 309 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 CYSLTR1Q9Y271 337 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 EMC9Q9Y3B6 208 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 HIVEP3Q5T1R4 2406 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 NBEAQ8NFP9 2946 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 SPEGQ15772 3267 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 TRBV20-1A0A075B6N2 111 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 C11orf94C9JXX5 98 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 CRYBB3P26998 211 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 XGP55808 180 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 DSCR4P56555 118 aaPredicted RBP4.86□□□□□ -1.63
CLK1-207ENST00000461981 TMEM50BP56557 158 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 HERV-K104P61576 105 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 LOXL1Q08397 574 aaPredicted RBP4.86□□□□□ -1.63
CLK1-207ENST00000461981 CDSNQ15517 529 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 OR10J3Q5JRS4 329 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 DTX2Q86UW9 622 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 C3orf56Q8N813 242 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 LRTM2Q8N967 370 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 HES7Q9BYE0 225 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 IL36GQ9NZH8 169 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 ZNF257Q9Y2Q1 563 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 TIMM8BQ9Y5J9 83 aaPredicted RBP4.86□□□□□ -1.63
CLK1-207ENST00000461981 SPTA1P02549 2419 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 ZFHX4Q86UP3 3567 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 TRAV38-1A0A0B4J264 116 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 SH2D7A6NKC9 451 aaPredicted RBP4.86□□□□□ -1.63
CLK1-207ENST00000461981 LDB3O75112 727 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 NAPSAO96009 420 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 HBZP02008 142 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 TCL1AP56279 114 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 DEFB134Q4QY38 66 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 ZNF793Q6ZN11 406 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 DOK3Q7L591 496 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 MOB1BQ7L9L4 216 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 OR10G8Q8NGN5 311 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 APOBEC3DQ96AK3 386 aaPredicted RBP4.86□□□□□ -1.63
CLK1-207ENST00000461981 HDHD3Q9BSH5 251 aaPredicted RBP4.86□□□□□ -1.63
CLK1-207ENST00000461981 TMEM70Q9BUB7 260 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 AICDAQ9GZX7 198 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 UBTD1Q9HAC8 227 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 SCRT2Q9NQ03 307 aa4.86□□□□□ -1.63
CLK1-207ENST00000461981 DYSFO75923 2080 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 SAA2-SAA4A0A096LPE2 208 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 TRGV10A0A0A0MS01 117 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 A0A1W2PQD3 144 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 DEGS1O15121 323 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 ANGPTL7O43827 346 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 CHST1O43916 411 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 IGKV1D-33P01593 117 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 IGKV1-33P01594 117 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 QRFPP83859 136 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 C2orf91Q6ZV80 131 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 TMEM116Q8NCL8 245 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 ZBTB34Q8NCN2 500 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 PTH2Q96A98 100 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 PIMREGQ9BSJ6 248 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 TPPP3Q9BW30 176 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 TMEM59Q9BXS4 323 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 LIME1Q9H400 295 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 A0A087WX48 190 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 PINLYPA6NC86 204 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 C2orf70A6NJV1 201 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 FABP5P3A8MUU1 101 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 DEFB108AA8MXU0 73 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 ADAM20O43506 726 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 ISG15P05161 165 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 F2RP25116 425 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 PPIFP30405 207 aaKnown RBP4.85□□□□□ -1.63
CLK1-207ENST00000461981 MAGEA5P43359 124 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 PDCD1Q15116 288 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 CEACAM16Q2WEN9 425 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 SAMD5Q5TGI4 173 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 HLA-DQA1Q5Y7H0 255 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 PRSS41Q7RTY9 318 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 SLC22A24Q8N4F4 322 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 RPP25LQ8N5L8 163 aaKnown RBP4.85□□□□□ -1.63
CLK1-207ENST00000461981 PP6455Q8WZ26 134 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 GRAMD2BQ96HH9 432 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 GPHA2Q96T91 129 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 SPIN2AQ99865 258 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 SPIN2BQ9BPZ2 258 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 TM2D2Q9BX73 214 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 TECRQ9NZ01 308 aaKnown RBP4.85□□□□□ -1.63
CLK1-207ENST00000461981 ONECUT1Q9UBC0 465 aa4.85□□□□□ -1.63
CLK1-207ENST00000461981 MCTS1Q9ULC4 181 aaKnown RBP4.85□□□□□ -1.63
CLK1-207ENST00000461981 A0A0B4J2E0 115 aa4.84□□□□□ -1.63
CLK1-207ENST00000461981 A0A1B0GX12 115 aa4.84□□□□□ -1.63
CLK1-207ENST00000461981 GAGE12JA6NER3 117 aa4.84□□□□□ -1.63
CLK1-207ENST00000461981 TGFBR3LH3BV60 316 aa4.84□□□□□ -1.63
CLK1-207ENST00000461981 BMPR1BO00238 502 aa4.84□□□□□ -1.63
CLK1-207ENST00000461981 GAGE7O76087 117 aa4.84□□□□□ -1.63
CLK1-207ENST00000461981 LY6G6DO95868 133 aa4.84□□□□□ -1.63
CLK1-207ENST00000461981 GAGE12FP0CL80 117 aa4.84□□□□□ -1.63
CLK1-207ENST00000461981 GAGE12GP0CL81 117 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms