RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 LIFP15018 202 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 PRSS3P35030 304 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 RBMXP38159 391 aaKnown RBP4.04□□□□□ -1.76
EPHA3-202ENST00000452448 CA7P43166 264 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 PPICP45877 212 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 FOXA3P55318 350 aaPredicted RBP4.04□□□□□ -1.76
EPHA3-202ENST00000452448 RND3P61587 244 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 ZNF90Q03938 601 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 Q499Y3 187 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 DMKNQ6E0U4 476 aaPredicted RBP4.04□□□□□ -1.76
EPHA3-202ENST00000452448 GAGE2AQ6NT46 116 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 C22orf34Q6ZV56 151 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 BAGE3Q86Y29 109 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 BAGE2Q86Y30 109 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 AQP3Q92482 292 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 SLC25A38Q96DW6 304 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 CHST6Q9GZX3 395 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 ZNF665Q9H7R5 613 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 TP53TG3Q9ULZ0 132 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 WDR83OSQ9Y284 106 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 CHCHD2Q9Y6H1 151 aaPredicted RBP4.04□□□□□ -1.76
EPHA3-202ENST00000452448 TRAV4A0A0B4J268 109 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.04□□□□□ -1.76
EPHA3-202ENST00000452448 SYS1-DBNDD2H3BUS1 97 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 OR1I1O60431 355 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 DEDDO75618 318 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 STK17BO94768 372 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 PPP1R3DO95685 299 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 PRH1P02810 166 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 OR9G9P0C7N8 305 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 EMDP50402 254 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 RPS4XP62701 263 aaKnown RBP4.04□□□□□ -1.76
EPHA3-202ENST00000452448 UNC119Q13432 240 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 CEACAM16Q2WEN9 425 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 GAGE13Q4V321 117 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 ZNF506Q5JVG8 444 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 ACP7Q6ZNF0 438 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 SLC25A42Q86VD7 318 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 GAPTQ8N292 157 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 OR2T10Q8NGZ9 312 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 APOBEC4Q8WW27 367 aaKnown RBP4.04□□□□□ -1.76
EPHA3-202ENST00000452448 SSMEM1Q8WWF3 244 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 AQP10Q96PS8 301 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 PRSS22Q9GZN4 317 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 TMEM191AQ9H0A3 160 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 CXXC4Q9H2H0 198 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 Q9Y3F1 56 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 F11RQ9Y624 299 aaKnown RBP4.04□□□□□ -1.76
EPHA3-202ENST00000452448 PXMP4Q9Y6I8 212 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 CUL9Q8IWT3 2517 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 SCN8AQ9UQD0 1980 aa4.04□□□□□ -1.76
EPHA3-202ENST00000452448 A0A1B0GV50 99 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 PITX3O75364 302 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 NDUFB4O95168 129 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 RBP4P02753 201 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 ATP1B1P05026 303 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 PPP1CCP36873 323 aaKnown RBP4.03□□□□□ -1.76
EPHA3-202ENST00000452448 TMEM150AQ86TG1 271 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 NR2C2APQ86WQ0 139 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 PRIMA1Q86XR5 153 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 WFDC11Q8NEX6 87 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 BRK1Q8WUW1 75 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 IGFBPL1Q8WX77 278 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 GEMIN6Q8WXD5 167 aaKnown RBP4.03□□□□□ -1.76
EPHA3-202ENST00000452448 ELSPBP1Q96BH3 223 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 NAA60Q9H7X0 242 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 REEP1Q9H902 201 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 TMEM202A6NGA9 273 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 SRRM4A7MD48 611 aaKnown RBP4.03□□□□□ -1.76
EPHA3-202ENST00000452448 PRYO14603 147 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 UQCRQO14949 82 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 RFPL3SP0C7P2 107 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 CRISP2P16562 243 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 CBLN1P23435 193 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 APOC4P55056 127 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 MTPNP58546 118 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 CLEC12BQ2HXU8 276 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 SYT14P1Q58G82 188 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 SPRNQ5BIV9 151 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 NMSQ5H8A3 153 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 MS4A13Q5J8X5 152 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 ANKRD37Q7Z713 158 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 C1orf158Q8N1D5 194 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 LINC00526Q96FQ7 95 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 CHCHD5Q9BSY4 110 aa4.03□□□□□ -1.76
EPHA3-202ENST00000452448 RPUSD1Q9UJJ7 312 aaKnown RBP4.03□□□□□ -1.76
EPHA3-202ENST00000452448 SNRNP200O75643 2136 aaKnown RBP4.03□□□□□ -1.76
EPHA3-202ENST00000452448 TRIOBPQ9H2D6 2365 aa4.03□□□□□ -1.77
EPHA3-202ENST00000452448 TRAV26-2A0A0B4J265 109 aa4.02□□□□□ -1.77
EPHA3-202ENST00000452448 FAM240AA0A1B0GVK7 77 aa4.02□□□□□ -1.77
EPHA3-202ENST00000452448 F5H697 171 aa4.02□□□□□ -1.77
EPHA3-202ENST00000452448 JTBO76095 146 aa4.02□□□□□ -1.77
EPHA3-202ENST00000452448 SLC2A10O95528 541 aa4.02□□□□□ -1.77
EPHA3-202ENST00000452448 NGFP01138 241 aa4.02□□□□□ -1.77
EPHA3-202ENST00000452448 IGLV3-27P01718 113 aa4.02□□□□□ -1.77
EPHA3-202ENST00000452448 WT1P19544 449 aaPredicted RBP4.02□□□□□ -1.77
EPHA3-202ENST00000452448 ATP5G3P48201 142 aa4.02□□□□□ -1.77
EPHA3-202ENST00000452448 HERV-K104P61576 105 aa4.02□□□□□ -1.77
EPHA3-202ENST00000452448 ZNF542PQ5EBM4 170 aa4.02□□□□□ -1.77
EPHA3-202ENST00000452448 C9orf139Q6ZV77 190 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms