RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 FAM168AQ92567 244 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 CITED2Q99967 270 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-218ENST00000442625 ZNF586Q9NXT0 402 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 HELTA6NFD8 242 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 HYPMO75409 117 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 TNFSF15O95150 251 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 RIPPLY3P57055 190 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 SUMO1P63165 101 aaKnown RBP11.59□□□□□ -0.55
MCF2L-218ENST00000442625 BOD1L2Q8IYS8 172 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 DUSP13Q9UII6 198 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 PCNX2A6NKB5 2137 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 CA2P00918 260 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 C3orf79P0CE67 100 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 HINT1P49773 126 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-218ENST00000442625 TMEM136Q6ZRR5 245 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 C1orf174Q8IYL3 243 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 ZNRF1Q8ND25 227 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 FAM110AQ9BQ89 295 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 NPVFQ9HCQ7 196 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 LSM4Q9Y4Z0 139 aaKnown RBP11.59□□□□□ -0.55
MCF2L-218ENST00000442625 CECR9P0C854 216 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 PRDX2P32119 198 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 CTRLP40313 264 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 Q0VG73 95 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 TMEM249Q2WGJ8 235 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 OR2Z1Q8NG97 314 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 SLC35E1Q96K37 410 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 SFXN3Q9BWM7 321 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 CST9LQ9H4G1 147 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 TECTAO75443 2155 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 BMPR1BO00238 502 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 MPDU1O75352 247 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 RHOBP62745 196 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 MORN2Q502X0 79 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 SPRNQ5BIV9 151 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 INO80CQ6PI98 192 aaPredicted RBP11.58□□□□□ -0.56
MCF2L-218ENST00000442625 TEPPQ6URK8 271 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 Q6ZT83 130 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 FAM214BQ7L5A3 538 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 WFDC8Q8IUA0 241 aa11.58□□□□□ -0.56
MCF2L-218ENST00000442625 OR7C2O60412 319 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 OR5G3P0C626 314 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 SCGB1A1P11684 91 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 ERVK-16P61578 105 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 FAM201AQ5SY85 155 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 UNQ5815/PRO19632Q6UWF5 114 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 NIT1Q86X76 327 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 WDR31Q8NA23 367 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 PRR7Q8TB68 274 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 ZNF503Q96F45 646 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 FER1L6-AS2Q96M78 137 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 NGBQ9NPG2 151 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 ZNRD1Q9P1U0 126 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 DMXL2Q8TDJ6 3036 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 RP1L1Q8IWN7 2480 aaPredicted RBP11.57□□□□□ -0.56
MCF2L-218ENST00000442625 IGKV1D-17A0A075B6S4 117 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 TRGV10A0A0A0MS01 117 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 ARL3P36405 182 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 RAB31Q13636 194 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 PSG3Q16557 428 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 TCTEX1D1Q8N7M0 179 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 VCX2Q9H322 139 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 PRO3102Q9H379 93 aa11.57□□□□□ -0.56
MCF2L-218ENST00000442625 IGKV1OR2-108A0A075B7D4 117 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 GGTLC3B5MD39 225 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 IGKV3-15P01624 115 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 IGLC2P0DOY2 106 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 IGLC3P0DOY3 106 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 NPY1RP25929 384 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 ID1P41134 155 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 GPR6P46095 362 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-218ENST00000442625 LGALS7P47929 136 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 S1PR3Q99500 378 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 CDC42EP3Q9UKI2 254 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 KALRNO60229 2985 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 TMEM265A0A087WTH1 108 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 TRAV5A0A0B4J249 113 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 FBLL1A6NHQ2 334 aaKnown RBP11.56□□□□□ -0.56
MCF2L-218ENST00000442625 ADH4P08319 380 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 LINC00869P0C866 280 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 CX3CL1P78423 397 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 MORN5Q5VZ52 161 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 OR4B1Q8NGF8 309 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 KCNS1Q96KK3 526 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 GNB1LQ9BYB4 327 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 CLCF1Q9UBD9 225 aa11.56□□□□□ -0.56
MCF2L-218ENST00000442625 HNRNPA3P51991 378 aaKnown RBP11.55□□□□□ -0.56
MCF2L-218ENST00000442625 SRSF6Q13247 344 aaKnown RBP11.55□□□□□ -0.56
MCF2L-218ENST00000442625 C9orf106Q8NAJ2 232 aa11.55□□□□□ -0.56
MCF2L-218ENST00000442625 TSKUQ8WUA8 353 aa11.55□□□□□ -0.56
MCF2L-218ENST00000442625 DPRXA6NFQ7 191 aa11.55□□□□□ -0.56
MCF2L-218ENST00000442625 ZNF324O75467 553 aaPredicted RBP11.55□□□□□ -0.56
MCF2L-218ENST00000442625 IGHV3-48P01763 117 aa11.55□□□□□ -0.56
MCF2L-218ENST00000442625 KIR2DL2P43627 348 aaPredicted RBP11.55□□□□□ -0.56
MCF2L-218ENST00000442625 RAB9AP51151 201 aa11.55□□□□□ -0.56
MCF2L-218ENST00000442625 DUX4L9Q6RFH8 374 aaPredicted RBP11.55□□□□□ -0.56
MCF2L-218ENST00000442625 C11orf52Q96A22 123 aa11.55□□□□□ -0.56
MCF2L-218ENST00000442625 SGK494Q96LW2 274 aa11.55□□□□□ -0.56
MCF2L-218ENST00000442625 NABP2Q9BQ15 211 aa11.55□□□□□ -0.56
MCF2L-218ENST00000442625 SSBP4Q9BWG4 385 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms