RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 GNG12Q9UBI6 72 aa16.66■□□□□ 0.26
SHOX2-203ENST00000441443 IZUMO1RA6ND01 250 aa16.66■□□□□ 0.26
SHOX2-203ENST00000441443 SMPD2O60906 423 aa16.66■□□□□ 0.26
SHOX2-203ENST00000441443 LINC00869P0C866 280 aa16.66■□□□□ 0.26
SHOX2-203ENST00000441443 UBE2G1P62253 170 aa16.66■□□□□ 0.26
SHOX2-203ENST00000441443 TBC1D28Q2M2D7 210 aa16.66■□□□□ 0.26
SHOX2-203ENST00000441443 PNKDQ8N490 385 aa16.66■□□□□ 0.26
SHOX2-203ENST00000441443 NABP2Q9BQ15 211 aa16.66■□□□□ 0.26
SHOX2-203ENST00000441443 ZNF355PQ9NSJ1 428 aa16.66■□□□□ 0.26
SHOX2-203ENST00000441443 PTPRBP23467 1997 aa16.66■□□□□ 0.26
SHOX2-203ENST00000441443 CADP27708 2225 aa16.65■□□□□ 0.26
SHOX2-203ENST00000441443 A0A1W2PN81 502 aa16.65■□□□□ 0.26
SHOX2-203ENST00000441443 PRR20EP86478 221 aa16.65■□□□□ 0.26
SHOX2-203ENST00000441443 PRR20CP86479 221 aa16.65■□□□□ 0.26
SHOX2-203ENST00000441443 PRR20DP86480 221 aa16.65■□□□□ 0.26
SHOX2-203ENST00000441443 PRR20BP86481 221 aa16.65■□□□□ 0.26
SHOX2-203ENST00000441443 PRR20AP86496 221 aa16.65■□□□□ 0.26
SHOX2-203ENST00000441443 MRPL27Q9P0M9 148 aaKnown RBP16.65■□□□□ 0.26
SHOX2-203ENST00000441443 S100A7P31151 101 aa16.65■□□□□ 0.26
SHOX2-203ENST00000441443 SH2D7A6NKC9 451 aaPredicted RBP16.64■□□□□ 0.26
SHOX2-203ENST00000441443 ARG2P78540 354 aa16.64■□□□□ 0.26
SHOX2-203ENST00000441443 OR8B3Q8NGG8 313 aa16.64■□□□□ 0.26
SHOX2-203ENST00000441443 OR8B2Q96RD0 313 aa16.64■□□□□ 0.26
SHOX2-203ENST00000441443 TMEM167BQ9NRX6 74 aa16.64■□□□□ 0.26
SHOX2-203ENST00000441443 TRAV30A0A087WSZ9 112 aa16.64■□□□□ 0.25
SHOX2-203ENST00000441443 C2orf70A6NJV1 201 aa16.64■□□□□ 0.25
SHOX2-203ENST00000441443 SPINT2O43291 252 aa16.64■□□□□ 0.25
SHOX2-203ENST00000441443 ZNF883P0CG24 379 aa16.64■□□□□ 0.25
SHOX2-203ENST00000441443 OR52E5Q8NH55 327 aa16.64■□□□□ 0.25
SHOX2-203ENST00000441443 TNFRSF19Q9NS68 423 aa16.64■□□□□ 0.25
SHOX2-203ENST00000441443 WASHC3Q9Y3C0 194 aa16.64■□□□□ 0.25
SHOX2-203ENST00000441443 ZNF891A8MT65 544 aaPredicted RBP16.64■□□□□ 0.25
SHOX2-203ENST00000441443 PSG1P11464 419 aa16.64■□□□□ 0.25
SHOX2-203ENST00000441443 MPV17P39210 176 aa16.64■□□□□ 0.25
SHOX2-203ENST00000441443 CAMPP49913 170 aa16.64■□□□□ 0.25
SHOX2-203ENST00000441443 TBR1Q16650 682 aa16.64■□□□□ 0.25
SHOX2-203ENST00000441443 BCL2L2Q92843 193 aaPredicted RBP16.64■□□□□ 0.25
SHOX2-203ENST00000441443 LOC102724200A0A096LPH7 203 aaPredicted RBP16.63■□□□□ 0.25
SHOX2-203ENST00000441443 CA7P43166 264 aa16.63■□□□□ 0.25
SHOX2-203ENST00000441443 SRSF6Q13247 344 aaKnown RBP16.63■□□□□ 0.25
SHOX2-203ENST00000441443 ACP7Q6ZNF0 438 aa16.63■□□□□ 0.25
SHOX2-203ENST00000441443 C11orf53Q8IXP5 236 aa16.63■□□□□ 0.25
SHOX2-203ENST00000441443 C21orf140B9A014 251 aa16.63■□□□□ 0.25
SHOX2-203ENST00000441443 PPOXP50336 477 aa16.63■□□□□ 0.25
SHOX2-203ENST00000441443 IGF2BP2-AS1Q96M15 143 aa16.63■□□□□ 0.25
SHOX2-203ENST00000441443 ROS1P08922 2347 aa16.62■□□□□ 0.25
SHOX2-203ENST00000441443 RNFT1Q5M7Z0 435 aa16.62■□□□□ 0.25
SHOX2-203ENST00000441443 S1PR3Q99500 378 aa16.62■□□□□ 0.25
SHOX2-203ENST00000441443 OR2T8A6NH00 312 aa16.62■□□□□ 0.25
SHOX2-203ENST00000441443 C15orf65H3BRN8 121 aa16.62■□□□□ 0.25
SHOX2-203ENST00000441443 CST9LQ9H4G1 147 aa16.62■□□□□ 0.25
SHOX2-203ENST00000441443 GSX1Q9H4S2 264 aaPredicted RBP16.62■□□□□ 0.25
SHOX2-203ENST00000441443 NUDT3O95989 172 aa16.62■□□□□ 0.25
SHOX2-203ENST00000441443 ZNF134P52741 427 aa16.62■□□□□ 0.25
SHOX2-203ENST00000441443 UTF1Q5T230 341 aa16.62■□□□□ 0.25
SHOX2-203ENST00000441443 LEAP2Q969E1 77 aa16.62■□□□□ 0.25
SHOX2-203ENST00000441443 SLC25A10Q9UBX3 287 aaPredicted RBP16.62■□□□□ 0.25
SHOX2-203ENST00000441443 FZR1Q9UM11 496 aa16.62■□□□□ 0.25
SHOX2-203ENST00000441443 IGKV1OR2-108A0A075B7D4 117 aa16.61■□□□□ 0.25
SHOX2-203ENST00000441443 PRR27Q6MZM9 219 aa16.61■□□□□ 0.25
SHOX2-203ENST00000441443 C1orf229Q6ZS94 237 aaPredicted RBP16.61■□□□□ 0.25
SHOX2-203ENST00000441443 ARL2-SNX15V9GYD0 113 aa16.61■□□□□ 0.25
SHOX2-203ENST00000441443 hDV102S1A0JD36 115 aa16.61■□□□□ 0.25
SHOX2-203ENST00000441443 FAM90A9PA6NNJ1 464 aa16.61■□□□□ 0.25
SHOX2-203ENST00000441443 KLRC4-KLRK1H3BQV0 150 aa16.61■□□□□ 0.25
SHOX2-203ENST00000441443 TAX1BP3O14907 124 aa16.61■□□□□ 0.25
SHOX2-203ENST00000441443 OR4A47Q6IF82 309 aa16.61■□□□□ 0.25
SHOX2-203ENST00000441443 NUP35Q8NFH5 326 aa16.61■□□□□ 0.25
SHOX2-203ENST00000441443 OR2T6Q8NHC8 308 aa16.61■□□□□ 0.25
SHOX2-203ENST00000441443 ZNF596Q8TC21 504 aa16.61■□□□□ 0.25
SHOX2-203ENST00000441443 OR4C46A6NHA9 309 aa16.6■□□□□ 0.25
SHOX2-203ENST00000441443 MLANAQ16655 118 aa16.6■□□□□ 0.25
SHOX2-203ENST00000441443 LRRC10Q5BKY1 277 aa16.6■□□□□ 0.25
SHOX2-203ENST00000441443 NANOS1Q8WY41 292 aaKnown RBP16.6■□□□□ 0.25
SHOX2-203ENST00000441443 ENY2Q9NPA8 101 aa16.6■□□□□ 0.25
SHOX2-203ENST00000441443 CD24P25063 80 aa16.6■□□□□ 0.25
SHOX2-203ENST00000441443 OCIAD2Q56VL3 154 aa16.6■□□□□ 0.25
SHOX2-203ENST00000441443 KLF13Q9Y2Y9 288 aaPredicted RBP16.6■□□□□ 0.25
SHOX2-203ENST00000441443 PPBPP02775 128 aa16.59■□□□□ 0.25
SHOX2-203ENST00000441443 CD46P15529 392 aa16.59■□□□□ 0.25
SHOX2-203ENST00000441443 LINC00173Q6ZV60 143 aa16.59■□□□□ 0.25
SHOX2-203ENST00000441443 SAP30LQ9HAJ7 183 aa16.59■□□□□ 0.25
SHOX2-203ENST00000441443 TNCP24821 2201 aa16.59■□□□□ 0.25
SHOX2-203ENST00000441443 TRAV5A0A0B4J249 113 aa16.59■□□□□ 0.25
SHOX2-203ENST00000441443 C15orf61A6NNL5 157 aa16.59■□□□□ 0.25
SHOX2-203ENST00000441443 ADH4P08319 380 aa16.59■□□□□ 0.25
SHOX2-203ENST00000441443 CCL11P51671 97 aa16.59■□□□□ 0.25
SHOX2-203ENST00000441443 WDR82Q6UXN9 313 aa16.59■□□□□ 0.25
SHOX2-203ENST00000441443 FER1L6-AS2Q96M78 137 aa16.59■□□□□ 0.25
SHOX2-203ENST00000441443 TRIB1Q96RU8 372 aa16.59■□□□□ 0.25
SHOX2-203ENST00000441443 TRGV8A0A0C4DH27 118 aa16.59■□□□□ 0.25
SHOX2-203ENST00000441443 AMMECR1LQ6DCA0 310 aa16.59■□□□□ 0.25
SHOX2-203ENST00000441443 TRAT1Q6PIZ9 186 aa16.59■□□□□ 0.25
SHOX2-203ENST00000441443 KLF14Q8TD94 323 aaPredicted RBP16.59■□□□□ 0.25
SHOX2-203ENST00000441443 TMEM70Q9BUB7 260 aa16.59■□□□□ 0.25
SHOX2-203ENST00000441443 MUC21A0A0G2JKD1 596 aa16.58■□□□□ 0.24
SHOX2-203ENST00000441443 MUC21A0A140T8X8 626 aa16.58■□□□□ 0.24
SHOX2-203ENST00000441443 IQCF6A8MYZ5 107 aa16.58■□□□□ 0.24
SHOX2-203ENST00000441443 MUC21Q5SSG8 566 aa16.58■□□□□ 0.24
SHOX2-203ENST00000441443 MORN5Q5VZ52 161 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms