RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 CTDSP2O14595 271 aa8.86□□□□□ -0.99
PDGFB-203ENST00000440375 CD74P04233 296 aa8.86□□□□□ -0.99
PDGFB-203ENST00000440375 CTSDP07339 412 aaPredicted RBP8.86□□□□□ -0.99
PDGFB-203ENST00000440375 HSPE1P61604 102 aaKnown RBP8.86□□□□□ -0.99
PDGFB-203ENST00000440375 SP6Q3SY56 376 aa8.86□□□□□ -0.99
PDGFB-203ENST00000440375 ARRDC1Q8N5I2 433 aa8.86□□□□□ -0.99
PDGFB-203ENST00000440375 OR13C8Q8NGS7 320 aa8.86□□□□□ -0.99
PDGFB-203ENST00000440375 PINX1Q96BK5 328 aaKnown RBP8.86□□□□□ -0.99
PDGFB-203ENST00000440375 ZNF486Q96H40 463 aaPredicted RBP8.86□□□□□ -0.99
PDGFB-203ENST00000440375 RNF2Q99496 336 aa8.86□□□□□ -0.99
PDGFB-203ENST00000440375 SLIRPQ9GZT3 109 aaKnown RBP8.86□□□□□ -0.99
PDGFB-203ENST00000440375 IGHV3OR16-13A0A075B7E8 117 aa8.85□□□□□ -0.99
PDGFB-203ENST00000440375 IGHV3-74A0A0B4J1X5 117 aa8.85□□□□□ -0.99
PDGFB-203ENST00000440375 IGHV7-4-1A0A0J9YVY3 117 aa8.85□□□□□ -0.99
PDGFB-203ENST00000440375 C3orf85A0A1B0GTC6 90 aa8.85□□□□□ -0.99
PDGFB-203ENST00000440375 K7EMT4 169 aa8.85□□□□□ -0.99
PDGFB-203ENST00000440375 NUPL2O15504 423 aaKnown RBP8.85□□□□□ -0.99
PDGFB-203ENST00000440375 RGS5O15539 181 aa8.85□□□□□ -0.99
PDGFB-203ENST00000440375 ST8SIA3O43173 380 aa8.85□□□□□ -0.99
PDGFB-203ENST00000440375 YIF1AO95070 293 aa8.85□□□□□ -0.99
PDGFB-203ENST00000440375 TBPP20226 339 aa8.85□□□□□ -0.99
PDGFB-203ENST00000440375 FCGR2BP31994 310 aaPredicted RBP8.85□□□□□ -0.99
PDGFB-203ENST00000440375 AKR1C2P52895 323 aa8.85□□□□□ -0.99
PDGFB-203ENST00000440375 MFAP4P55083 255 aa8.85□□□□□ -0.99
PDGFB-203ENST00000440375 EWSR1Q01844 656 aaKnown RBP eCLIP8.85□□□□□ -0.99
PDGFB-203ENST00000440375 ZNF124Q15973 351 aa8.85□□□□□ -0.99
PDGFB-203ENST00000440375 SCGB2B2Q4G0G5 96 aa8.85□□□□□ -0.99
PDGFB-203ENST00000440375 MARCH1Q8TCQ1 289 aa8.85□□□□□ -0.99
PDGFB-203ENST00000440375 OR10C1Q96KK4 312 aa8.85□□□□□ -0.99
PDGFB-203ENST00000440375 C6orf62Q9GZU0 229 aaPredicted RBP8.85□□□□□ -0.99
PDGFB-203ENST00000440375 NXF2Q9GZY0 626 aaKnown RBP8.85□□□□□ -0.99
PDGFB-203ENST00000440375 SMPXQ9UHP9 88 aa8.85□□□□□ -0.99
PDGFB-203ENST00000440375 ZNF701M0R085 212 aaPredicted RBP8.84□□□□□ -0.99
PDGFB-203ENST00000440375 CHEK1O14757 476 aa8.84□□□□□ -0.99
PDGFB-203ENST00000440375 RAB3DO95716 219 aa8.84□□□□□ -0.99
PDGFB-203ENST00000440375 RPL35AP18077 110 aaKnown RBP8.84□□□□□ -0.99
PDGFB-203ENST00000440375 RELQ04864 619 aaPredicted RBP8.84□□□□□ -0.99
PDGFB-203ENST00000440375 TRIM16LQ309B1 348 aa8.84□□□□□ -0.99
PDGFB-203ENST00000440375 DEFB135Q30KP9 77 aa8.84□□□□□ -0.99
PDGFB-203ENST00000440375 LAMTOR1Q6IAA8 161 aa8.84□□□□□ -0.99
PDGFB-203ENST00000440375 STEAP1BQ6NZ63 245 aa8.84□□□□□ -0.99
PDGFB-203ENST00000440375 SLC35G3Q8N808 338 aa8.84□□□□□ -0.99
PDGFB-203ENST00000440375 TMEM229BQ8NBD8 167 aa8.84□□□□□ -0.99
PDGFB-203ENST00000440375 TERB2Q8NHR7 220 aa8.84□□□□□ -0.99
PDGFB-203ENST00000440375 MCFD2Q8NI22 146 aa8.84□□□□□ -0.99
PDGFB-203ENST00000440375 RHPN1-AS1Q9BWJ2 59 aa8.84□□□□□ -0.99
PDGFB-203ENST00000440375 MRPL36Q9P0J6 103 aaKnown RBP8.84□□□□□ -0.99
PDGFB-203ENST00000440375 IGKV3-7A0A075B6H7 116 aa8.83□□□□□ -1
PDGFB-203ENST00000440375 OR4C46A6NHA9 309 aa8.83□□□□□ -1
PDGFB-203ENST00000440375 GABARAPH6UMI1 98 aa8.83□□□□□ -1
PDGFB-203ENST00000440375 GNG7O60262 68 aa8.83□□□□□ -1
PDGFB-203ENST00000440375 RNASE2P10153 161 aaKnown RBP8.83□□□□□ -1
PDGFB-203ENST00000440375 UCP1P25874 307 aa8.83□□□□□ -1
PDGFB-203ENST00000440375 ETV6P41212 452 aa8.83□□□□□ -1
PDGFB-203ENST00000440375 TFPI2P48307 235 aa8.83□□□□□ -1
PDGFB-203ENST00000440375 TAS2R19P59542 299 aa8.83□□□□□ -1
PDGFB-203ENST00000440375 ERHP84090 104 aaKnown RBP8.83□□□□□ -1
PDGFB-203ENST00000440375 Q6ZRM9 215 aa8.83□□□□□ -1
PDGFB-203ENST00000440375 APRG1Q8IVJ8 170 aa8.83□□□□□ -1
PDGFB-203ENST00000440375 TMEM116Q8NCL8 245 aa8.83□□□□□ -1
PDGFB-203ENST00000440375 LHFPL5Q8TAF8 219 aa8.83□□□□□ -1
PDGFB-203ENST00000440375 SMIM4Q8WVI0 70 aa8.83□□□□□ -1
PDGFB-203ENST00000440375 TXN2Q99757 166 aa8.83□□□□□ -1
PDGFB-203ENST00000440375 ZFAND3Q9H8U3 227 aa8.83□□□□□ -1
PDGFB-203ENST00000440375 COPZ2Q9P299 210 aa8.83□□□□□ -1
PDGFB-203ENST00000440375 A0A0J9YWU9 116 aa8.82□□□□□ -1
PDGFB-203ENST00000440375 INS-IGF2F8WCM5 200 aa8.82□□□□□ -1
PDGFB-203ENST00000440375 IFNA17P01571 189 aa8.82□□□□□ -1
PDGFB-203ENST00000440375 APOHP02749 345 aaPredicted RBP8.82□□□□□ -1
PDGFB-203ENST00000440375 OR5AC1P0C628 307 aa8.82□□□□□ -1
PDGFB-203ENST00000440375 HOXA1P49639 335 aaPredicted RBP8.82□□□□□ -1
PDGFB-203ENST00000440375 APOC4P55056 127 aa8.82□□□□□ -1
PDGFB-203ENST00000440375 FAM90A2PQ658T7 463 aa8.82□□□□□ -1
PDGFB-203ENST00000440375 PVRIGQ6DKI7 326 aa8.82□□□□□ -1
PDGFB-203ENST00000440375 TOMM20LQ6UXN7 152 aa8.82□□□□□ -1
PDGFB-203ENST00000440375 LILRB2Q8N423 598 aa8.82□□□□□ -1
PDGFB-203ENST00000440375 GBGT1Q8N5D6 347 aa8.82□□□□□ -1
PDGFB-203ENST00000440375 CCDC71LQ8N9Z2 235 aa8.82□□□□□ -1
PDGFB-203ENST00000440375 OR4C16Q8NGL9 310 aa8.82□□□□□ -1
PDGFB-203ENST00000440375 IL17DQ8TAD2 202 aa8.82□□□□□ -1
PDGFB-203ENST00000440375 ZFAND1Q8TCF1 268 aa8.82□□□□□ -1
PDGFB-203ENST00000440375 ST8SIA2Q92186 375 aa8.82□□□□□ -1
PDGFB-203ENST00000440375 DIRAS2Q96HU8 199 aa8.82□□□□□ -1
PDGFB-203ENST00000440375 RTBDNQ9BSG5 229 aaPredicted RBP8.82□□□□□ -1
PDGFB-203ENST00000440375 FNDC4Q9H6D8 234 aaPredicted RBP8.82□□□□□ -1
PDGFB-203ENST00000440375 TRAV14DV4A0A0A6YYC5 116 aa8.81□□□□□ -1
PDGFB-203ENST00000440375 IGHV3-66A0A0C4DH42 116 aa8.81□□□□□ -1
PDGFB-203ENST00000440375 A0A1B0GU03 582 aa8.81□□□□□ -1
PDGFB-203ENST00000440375 SPRY2O43597 315 aa8.81□□□□□ -1
PDGFB-203ENST00000440375 SNCAP37840 140 aa8.81□□□□□ -1
PDGFB-203ENST00000440375 PMS2P11Q13670 270 aa8.81□□□□□ -1
PDGFB-203ENST00000440375 MLANAQ16655 118 aa8.81□□□□□ -1
PDGFB-203ENST00000440375 Q6ZWC4 215 aa8.81□□□□□ -1
PDGFB-203ENST00000440375 LYG2Q86SG7 212 aa8.81□□□□□ -1
PDGFB-203ENST00000440375 RNASE11Q8TAA1 199 aaKnown RBP8.81□□□□□ -1
PDGFB-203ENST00000440375 C15orf40Q8WUR7 153 aa8.81□□□□□ -1
PDGFB-203ENST00000440375 TMEM222Q9H0R3 208 aa8.81□□□□□ -1
PDGFB-203ENST00000440375 MAP6D1Q9H9H5 199 aa8.81□□□□□ -1
PDGFB-203ENST00000440375 NDUFA13Q9P0J0 144 aa8.81□□□□□ -1
PDGFB-203ENST00000440375 PUS1Q9Y606 427 aaKnown RBP eCLIP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms