RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 KRTAP10-3P60369 221 aa12.87□□□□□ -0.35
CTDSPL-204ENST00000435525 SRSF4Q08170 494 aaKnown RBP12.87□□□□□ -0.35
CTDSPL-204ENST00000435525 KLK9Q2XQG4 91 aa12.87□□□□□ -0.35
CTDSPL-204ENST00000435525 C15orf32Q32M92 178 aa12.87□□□□□ -0.35
CTDSPL-204ENST00000435525 ETFRF1Q6IPR1 90 aa12.87□□□□□ -0.35
CTDSPL-204ENST00000435525 RNASEH2CQ8TDP1 164 aaKnown RBP12.87□□□□□ -0.35
CTDSPL-204ENST00000435525 VN1R17PQ8TDU5 208 aa12.87□□□□□ -0.35
CTDSPL-204ENST00000435525 FANCD2OSQ96PS1 177 aa12.87□□□□□ -0.35
CTDSPL-204ENST00000435525 PSENENQ9NZ42 101 aa12.87□□□□□ -0.35
CTDSPL-204ENST00000435525 KLK9Q9UKQ9 250 aa12.87□□□□□ -0.35
CTDSPL-204ENST00000435525 SCAF4O95104 1147 aaKnown RBP12.86□□□□□ -0.35
CTDSPL-204ENST00000435525 LGALS1P09382 135 aaKnown RBP12.86□□□□□ -0.35
CTDSPL-204ENST00000435525 DPF1Q92782 380 aa12.86□□□□□ -0.35
CTDSPL-204ENST00000435525 PINX1Q96BK5 328 aaKnown RBP12.86□□□□□ -0.35
CTDSPL-204ENST00000435525 SMIM8Q96KF7 97 aa12.86□□□□□ -0.35
CTDSPL-204ENST00000435525 NDUFB8O95169 186 aa12.85□□□□□ -0.35
CTDSPL-204ENST00000435525 IGHV3-11P01762 117 aa12.85□□□□□ -0.35
CTDSPL-204ENST00000435525 OPRK1P41145 380 aa12.85□□□□□ -0.35
CTDSPL-204ENST00000435525 RUNX1Q01196 453 aa12.85□□□□□ -0.35
CTDSPL-204ENST00000435525 FCN2Q15485 313 aa12.85□□□□□ -0.35
CTDSPL-204ENST00000435525 BSXQ3C1V8 233 aa12.85□□□□□ -0.35
CTDSPL-204ENST00000435525 SPANXN5Q5MJ07 72 aa12.85□□□□□ -0.35
CTDSPL-204ENST00000435525 C19orf35Q6ZS72 473 aa12.85□□□□□ -0.35
CTDSPL-204ENST00000435525 RCL1Q9Y2P8 373 aaKnown RBP12.85□□□□□ -0.35
CTDSPL-204ENST00000435525 TNCP24821 2201 aa12.85□□□□□ -0.35
CTDSPL-204ENST00000435525 K7EPK0 472 aa12.84□□□□□ -0.35
CTDSPL-204ENST00000435525 TSC22D2O75157 780 aa12.84□□□□□ -0.35
CTDSPL-204ENST00000435525 PF4P02776 101 aa12.84□□□□□ -0.35
CTDSPL-204ENST00000435525 BCAP31P51572 246 aa12.84□□□□□ -0.35
CTDSPL-204ENST00000435525 H2BFSP57053 126 aa12.84□□□□□ -0.35
CTDSPL-204ENST00000435525 FGL1Q08830 312 aa12.84□□□□□ -0.35
CTDSPL-204ENST00000435525 RAB32Q13637 225 aa12.84□□□□□ -0.35
CTDSPL-204ENST00000435525 OR5B12Q96R08 314 aa12.84□□□□□ -0.35
CTDSPL-204ENST00000435525 ATP6V0BQ99437 205 aa12.84□□□□□ -0.35
CTDSPL-204ENST00000435525 TXN2Q99757 166 aa12.84□□□□□ -0.35
CTDSPL-204ENST00000435525 RANGRFQ9HD47 186 aaPredicted RBP12.84□□□□□ -0.35
CTDSPL-204ENST00000435525 C21orf62Q9NYP8 219 aa12.84□□□□□ -0.35
CTDSPL-204ENST00000435525 MT-CO2P00403 227 aa12.83□□□□□ -0.36
CTDSPL-204ENST00000435525 GIPP09681 153 aaPredicted RBP12.83□□□□□ -0.36
CTDSPL-204ENST00000435525 SLC25A4P12235 298 aa12.83□□□□□ -0.36
CTDSPL-204ENST00000435525 NPBWR1P48145 328 aa12.83□□□□□ -0.36
CTDSPL-204ENST00000435525 CAV2P51636 162 aa12.83□□□□□ -0.36
CTDSPL-204ENST00000435525 MFAP4P55083 255 aa12.83□□□□□ -0.36
CTDSPL-204ENST00000435525 KIAA0141Q14154 515 aaPredicted RBP12.83□□□□□ -0.36
CTDSPL-204ENST00000435525 LRRC37A5PQ49AS3 106 aa12.83□□□□□ -0.36
CTDSPL-204ENST00000435525 ZNF343Q6P1L6 599 aa12.83□□□□□ -0.36
CTDSPL-204ENST00000435525 ETV3LQ6ZN32 361 aa12.83□□□□□ -0.36
CTDSPL-204ENST00000435525 DCUN1D4Q92564 292 aa12.83□□□□□ -0.36
CTDSPL-204ENST00000435525 ZNF436Q9C0F3 470 aaPredicted RBP12.83□□□□□ -0.36
CTDSPL-204ENST00000435525 GNB4Q9HAV0 340 aa12.83□□□□□ -0.36
CTDSPL-204ENST00000435525 PEF1Q9UBV8 284 aaKnown RBP12.83□□□□□ -0.36
CTDSPL-204ENST00000435525 COL6A5A8TX70 2615 aa12.83□□□□□ -0.36
CTDSPL-204ENST00000435525 FBN1P35555 2871 aaKnown RBP12.83□□□□□ -0.36
CTDSPL-204ENST00000435525 PLXNB1O43157 2135 aa12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 E5RGE8 158 aa12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 HSPB1P04792 205 aaKnown RBP12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 ZP3P21754 424 aa12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 MYCNOSP40205 109 aa12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 MFAP2P55001 183 aa12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 RAP2BP61225 183 aa12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 ZNF616Q08AN1 781 aa12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 IL15RAQ13261 267 aa12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 Q56UQ5 140 aa12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 PVRIGQ6DKI7 326 aa12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 ACSM6Q6P461 480 aa12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 Q6ZNX1 250 aa12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 C8orf86Q6ZUL3 223 aa12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 OR1N2Q8NGR9 330 aa12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 THAP6Q8TBB0 222 aa12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 PPP1R1CQ8WVI7 109 aa12.82□□□□□ -0.36
CTDSPL-204ENST00000435525 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 ANKRD34BA5PLL1 514 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 LINC01619G3V211 115 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 H3BP45 60 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 I3L521 148 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 CCL24O00175 119 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 DEDDO75618 318 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 GPX4P36969 197 aaPredicted RBP12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 DEFA5Q01523 94 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 STX12Q86Y82 276 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 UBAC2Q8NBM4 344 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 OR11H1Q8NG94 326 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 OR11H7Q8NGC8 314 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 SCARB1Q8WTV0 552 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 CACNG8Q8WXS5 425 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 SLC35E1Q96K37 410 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 SLC25A31Q9H0C2 315 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 DMRT1Q9Y5R6 373 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 CUBNO60494 3623 aa12.81□□□□□ -0.36
CTDSPL-204ENST00000435525 IGHV3-21A0A0B4J1V1 117 aa12.8□□□□□ -0.36
CTDSPL-204ENST00000435525 MFSD2BA6NFX1 497 aa12.8□□□□□ -0.36
CTDSPL-204ENST00000435525 C15orf62A8K5M9 175 aa12.8□□□□□ -0.36
CTDSPL-204ENST00000435525 I3L2K1 104 aa12.8□□□□□ -0.36
CTDSPL-204ENST00000435525 K7EIM0 57 aa12.8□□□□□ -0.36
CTDSPL-204ENST00000435525 NUPL2O15504 423 aaKnown RBP12.8□□□□□ -0.36
CTDSPL-204ENST00000435525 GNG7O60262 68 aa12.8□□□□□ -0.36
CTDSPL-204ENST00000435525 CXCL3P19876 107 aa12.8□□□□□ -0.36
CTDSPL-204ENST00000435525 ARL3P36405 182 aa12.8□□□□□ -0.36
CTDSPL-204ENST00000435525 SPSB3Q6PJ21 355 aa12.8□□□□□ -0.36
CTDSPL-204ENST00000435525 CLEC19AQ6UXS0 136 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms