RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 SSMEM1Q8WWF3 244 aa11.43□□□□□ -0.58
CALD1-207ENST00000430085 SRSF12Q8WXF0 261 aaKnown RBP11.43□□□□□ -0.58
CALD1-207ENST00000430085 C1orf159Q96HA4 380 aa11.43□□□□□ -0.58
CALD1-207ENST00000430085 SLC35B3Q9H1N7 401 aa11.43□□□□□ -0.58
CALD1-207ENST00000430085 POLQO75417 2590 aa11.42□□□□□ -0.58
CALD1-207ENST00000430085 A0A1W2PPV4 95 aa11.42□□□□□ -0.58
CALD1-207ENST00000430085 FCN1O00602 326 aa11.42□□□□□ -0.58
CALD1-207ENST00000430085 NPFFO15130 113 aa11.42□□□□□ -0.58
CALD1-207ENST00000430085 NDUFA3O95167 84 aa11.42□□□□□ -0.58
CALD1-207ENST00000430085 APELAP0DMC3 54 aa11.42□□□□□ -0.58
CALD1-207ENST00000430085 AREGP15514 252 aa11.42□□□□□ -0.58
CALD1-207ENST00000430085 SAA4P35542 130 aa11.42□□□□□ -0.58
CALD1-207ENST00000430085 B2MP61769 119 aa11.42□□□□□ -0.58
CALD1-207ENST00000430085 ZNF114Q8NC26 417 aa11.42□□□□□ -0.58
CALD1-207ENST00000430085 RAB24Q969Q5 203 aa11.42□□□□□ -0.58
CALD1-207ENST00000430085 PDZD2O15018 2839 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 ZFP92A6NM28 416 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 NCBP2LA6PVI3 153 aaKnown RBP11.41□□□□□ -0.58
CALD1-207ENST00000430085 HMGB3O15347 200 aaKnown RBP11.41□□□□□ -0.58
CALD1-207ENST00000430085 EIF3GO75821 320 aaKnown RBP eCLIP11.41□□□□□ -0.58
CALD1-207ENST00000430085 IFNA1P01562 189 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 FAM106CPP0CH98 169 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 TMEM11P17152 192 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 BRS3P32247 399 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 RPL29P47914 159 aaKnown RBP11.41□□□□□ -0.58
CALD1-207ENST00000430085 MLANAQ16655 118 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 GUCA2BQ16661 112 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 CLEC12BQ2HXU8 276 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 ZNF506Q5JVG8 444 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 STPG3Q8N7X2 389 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 TEX22C9J3V5 150 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 YIF1AO95070 293 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 SNAPINO95295 136 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 SLC25A16P16260 332 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 ICAM4Q14773 271 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 C5orf64Q2M2E5 130 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 KHDC3LQ587J8 217 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 GCSAMLQ5JQS6 135 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 RXFP4Q8TDU9 374 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 ABHD5Q8WTS1 349 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 ACY3Q96HD9 319 aa11.41□□□□□ -0.58
CALD1-207ENST00000430085 NKX6-2Q9C056 277 aaPredicted RBP11.41□□□□□ -0.58
CALD1-207ENST00000430085 ANKRD17O75179 2603 aaKnown RBP11.4□□□□□ -0.58
CALD1-207ENST00000430085 CENPVL3A0A0U1RRI6 287 aa11.4□□□□□ -0.58
CALD1-207ENST00000430085 LOC102723971A0A1B0GUV8 181 aa11.4□□□□□ -0.58
CALD1-207ENST00000430085 SEC14L6B5MCN3 397 aa11.4□□□□□ -0.58
CALD1-207ENST00000430085 CORTO00230 105 aa11.4□□□□□ -0.58
CALD1-207ENST00000430085 MSMBP08118 114 aa11.4□□□□□ -0.58
CALD1-207ENST00000430085 BCL2P10415 239 aa11.4□□□□□ -0.58
CALD1-207ENST00000430085 EBI3Q14213 229 aa11.4□□□□□ -0.58
CALD1-207ENST00000430085 ETFRF1Q6IPR1 90 aa11.4□□□□□ -0.58
CALD1-207ENST00000430085 ATRAIDQ6UW56 229 aa11.4□□□□□ -0.58
CALD1-207ENST00000430085 IQCF2Q8IXL9 164 aa11.4□□□□□ -0.58
CALD1-207ENST00000430085 OR1P1Q8NH06 330 aa11.4□□□□□ -0.58
CALD1-207ENST00000430085 OR2T6Q8NHC8 308 aa11.4□□□□□ -0.58
CALD1-207ENST00000430085 MISP3Q96FF7 219 aa11.4□□□□□ -0.58
CALD1-207ENST00000430085 SRSF8Q9BRL6 282 aaKnown RBP11.4□□□□□ -0.58
CALD1-207ENST00000430085 WNK2Q9Y3S1 2297 aa11.4□□□□□ -0.59
CALD1-207ENST00000430085 HSPB1P04792 205 aaKnown RBP11.39□□□□□ -0.59
CALD1-207ENST00000430085 DEFA4P12838 97 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 OR10J1P30954 320 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 SSBP2P81877 361 aaPredicted RBP11.39□□□□□ -0.59
CALD1-207ENST00000430085 FXYD3Q14802 87 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 RBMS3Q6XE24 437 aaKnown RBP11.39□□□□□ -0.59
CALD1-207ENST00000430085 Q8N6K4 173 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 SPG11Q96JI7 2443 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 PRR20EP86478 221 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 PRR20CP86479 221 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 PRR20DP86480 221 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 PRR20BP86481 221 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 PRR20AP86496 221 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 BTN1A1Q13410 526 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 FBLN7Q53RD9 439 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 PIP4P2Q8N4L2 257 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 C22orf15Q8WYQ4 148 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 AJUBAQ96IF1 538 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 FNDC4Q9H6D8 234 aaPredicted RBP11.39□□□□□ -0.59
CALD1-207ENST00000430085 C1RLQ9NZP8 487 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 SLC45A2Q9UMX9 530 aa11.39□□□□□ -0.59
CALD1-207ENST00000430085 F11RQ9Y624 299 aaKnown RBP11.39□□□□□ -0.59
CALD1-207ENST00000430085 IGKV1OR2-108A0A075B7D4 117 aa11.38□□□□□ -0.59
CALD1-207ENST00000430085 B4DSR2 109 aa11.38□□□□□ -0.59
CALD1-207ENST00000430085 CEBPGP53567 150 aa11.38□□□□□ -0.59
CALD1-207ENST00000430085 PMS2P11Q13670 270 aa11.38□□□□□ -0.59
CALD1-207ENST00000430085 SOHLH1Q5JUK2 328 aa11.38□□□□□ -0.59
CALD1-207ENST00000430085 PVRIGQ6DKI7 326 aa11.38□□□□□ -0.59
CALD1-207ENST00000430085 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.38□□□□□ -0.59
CALD1-207ENST00000430085 VAX2Q9UIW0 290 aa11.38□□□□□ -0.59
CALD1-207ENST00000430085 TRAV40A0A0B4J280 105 aa11.37□□□□□ -0.59
CALD1-207ENST00000430085 IGHV1-69DA0A0B4J2H0 117 aa11.37□□□□□ -0.59
CALD1-207ENST00000430085 IGHV1-69P01742 117 aa11.37□□□□□ -0.59
CALD1-207ENST00000430085 SRP19P09132 144 aaKnown RBP11.37□□□□□ -0.59
CALD1-207ENST00000430085 PSMB3P49720 205 aa11.37□□□□□ -0.59
CALD1-207ENST00000430085 RHOBP62745 196 aa11.37□□□□□ -0.59
CALD1-207ENST00000430085 NPIPB3Q92617 1050 aa11.37□□□□□ -0.59
CALD1-207ENST00000430085 TMPRSS5Q9H3S3 457 aa11.37□□□□□ -0.59
CALD1-207ENST00000430085 MANBALQ9NQG1 85 aa11.37□□□□□ -0.59
CALD1-207ENST00000430085 MED13LQ71F56 2210 aa11.37□□□□□ -0.59
CALD1-207ENST00000430085 IGHV3OR16-10A0A075B7F0 116 aa11.37□□□□□ -0.59
CALD1-207ENST00000430085 PLXNB1O43157 2135 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms