RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 C7orf50Q9BRJ6 194 aaKnown RBP13.21□□□□□ -0.29
CTSD-203ENST00000429746 CHRDL1Q9BU40 450 aa13.21□□□□□ -0.29
CTSD-203ENST00000429746 ZC4H2Q9NQZ6 224 aa13.21□□□□□ -0.29
CTSD-203ENST00000429746 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.21□□□□□ -0.29
CTSD-203ENST00000429746 TMEM213A2RRL7 107 aa13.2□□□□□ -0.3
CTSD-203ENST00000429746 A8MWP6 167 aa13.2□□□□□ -0.3
CTSD-203ENST00000429746 TGOLN2O43493 480 aa13.2□□□□□ -0.3
CTSD-203ENST00000429746 FCGR2BP31994 310 aaPredicted RBP13.2□□□□□ -0.3
CTSD-203ENST00000429746 SPCS3P61009 180 aa13.2□□□□□ -0.3
CTSD-203ENST00000429746 CENPSQ8N2Z9 138 aa13.2□□□□□ -0.3
CTSD-203ENST00000429746 OR1L6Q8NGR2 347 aa13.2□□□□□ -0.3
CTSD-203ENST00000429746 CCDC32Q9BV29 185 aa13.2□□□□□ -0.3
CTSD-203ENST00000429746 ZNF436Q9C0F3 470 aaPredicted RBP13.2□□□□□ -0.3
CTSD-203ENST00000429746 FNDC4Q9H6D8 234 aaPredicted RBP13.2□□□□□ -0.3
CTSD-203ENST00000429746 THYN1Q9P016 225 aa13.2□□□□□ -0.3
CTSD-203ENST00000429746 MRPL36Q9P0J6 103 aaKnown RBP13.2□□□□□ -0.3
CTSD-203ENST00000429746 TBC1D24Q9ULP9 559 aa13.2□□□□□ -0.3
CTSD-203ENST00000429746 ZNF256Q9Y2P7 627 aaPredicted RBP13.2□□□□□ -0.3
CTSD-203ENST00000429746 IZUMO1RA6ND01 250 aa13.19□□□□□ -0.3
CTSD-203ENST00000429746 IFNA17P01571 189 aa13.19□□□□□ -0.3
CTSD-203ENST00000429746 CTSGP08311 255 aa13.19□□□□□ -0.3
CTSD-203ENST00000429746 IFITM3Q01628 133 aa13.19□□□□□ -0.3
CTSD-203ENST00000429746 LGI3Q8N145 548 aa13.19□□□□□ -0.3
CTSD-203ENST00000429746 C21orf62Q9NYP8 219 aa13.19□□□□□ -0.3
CTSD-203ENST00000429746 HSPB7Q9UBY9 170 aa13.19□□□□□ -0.3
CTSD-203ENST00000429746 C9orf170A2RU37 121 aa13.18□□□□□ -0.3
CTSD-203ENST00000429746 OR2T8A6NH00 312 aa13.18□□□□□ -0.3
CTSD-203ENST00000429746 C2orf70A6NJV1 201 aa13.18□□□□□ -0.3
CTSD-203ENST00000429746 LYRM1O43325 122 aa13.18□□□□□ -0.3
CTSD-203ENST00000429746 MT-CO2P00403 227 aa13.18□□□□□ -0.3
CTSD-203ENST00000429746 IGHV3-48P01763 117 aa13.18□□□□□ -0.3
CTSD-203ENST00000429746 SULT1A3P0DMM9 295 aa13.18□□□□□ -0.3
CTSD-203ENST00000429746 SULT1A4P0DMN0 295 aa13.18□□□□□ -0.3
CTSD-203ENST00000429746 UBE2MP61081 183 aaKnown RBP13.18□□□□□ -0.3
CTSD-203ENST00000429746 SRPXP78539 464 aa13.18□□□□□ -0.3
CTSD-203ENST00000429746 ERHP84090 104 aaKnown RBP13.18□□□□□ -0.3
CTSD-203ENST00000429746 CD69Q07108 199 aa13.18□□□□□ -0.3
CTSD-203ENST00000429746 RNASE11Q8TAA1 199 aaKnown RBP13.18□□□□□ -0.3
CTSD-203ENST00000429746 CACNG8Q8WXS5 425 aa13.18□□□□□ -0.3
CTSD-203ENST00000429746 OR4C12Q96R67 309 aa13.18□□□□□ -0.3
CTSD-203ENST00000429746 ELOVL1Q9BW60 279 aa13.18□□□□□ -0.3
CTSD-203ENST00000429746 DUXBA0A1W2PPF3 345 aa13.17□□□□□ -0.3
CTSD-203ENST00000429746 ANXA7P20073 488 aaKnown RBP13.17□□□□□ -0.3
CTSD-203ENST00000429746 VAMP1P23763 118 aa13.17□□□□□ -0.3
CTSD-203ENST00000429746 TNFRSF9Q07011 255 aa13.17□□□□□ -0.3
CTSD-203ENST00000429746 SMCO1Q147U7 214 aa13.17□□□□□ -0.3
CTSD-203ENST00000429746 MLANAQ16655 118 aa13.17□□□□□ -0.3
CTSD-203ENST00000429746 MISP3Q96FF7 219 aa13.17□□□□□ -0.3
CTSD-203ENST00000429746 BSCL2Q96G97 398 aaPredicted RBP13.17□□□□□ -0.3
CTSD-203ENST00000429746 BATF3Q9NR55 127 aa13.17□□□□□ -0.3
CTSD-203ENST00000429746 IGHV3-35A0A0C4DH35 117 aa13.16□□□□□ -0.3
CTSD-203ENST00000429746 NXPH3O95157 252 aa13.16□□□□□ -0.3
CTSD-203ENST00000429746 NHLRC4P0CG21 123 aaPredicted RBP13.16□□□□□ -0.3
CTSD-203ENST00000429746 C8orf88P0DMB2 117 aa13.16□□□□□ -0.3
CTSD-203ENST00000429746 ANXA3P12429 323 aa13.16□□□□□ -0.3
CTSD-203ENST00000429746 GP9P14770 177 aa13.16□□□□□ -0.3
CTSD-203ENST00000429746 INPP1P49441 399 aa13.16□□□□□ -0.3
CTSD-203ENST00000429746 HOXA1P49639 335 aaPredicted RBP13.16□□□□□ -0.3
CTSD-203ENST00000429746 DHRS2Q13268 280 aa13.16□□□□□ -0.3
CTSD-203ENST00000429746 Q8N1Y9 231 aa13.16□□□□□ -0.3
CTSD-203ENST00000429746 TMEM190Q8WZ59 177 aa13.16□□□□□ -0.3
CTSD-203ENST00000429746 TENM3Q9P273 2699 aa13.15□□□□□ -0.3
CTSD-203ENST00000429746 A0A1B0GU03 582 aa13.15□□□□□ -0.3
CTSD-203ENST00000429746 CYB5BO43169 146 aa13.15□□□□□ -0.3
CTSD-203ENST00000429746 OR4E1P0C645 316 aa13.15□□□□□ -0.3
CTSD-203ENST00000429746 FOLR2P14207 255 aa13.15□□□□□ -0.3
CTSD-203ENST00000429746 TATDN3Q17R31 274 aa13.15□□□□□ -0.3
CTSD-203ENST00000429746 TM4SF20Q53R12 229 aa13.15□□□□□ -0.3
CTSD-203ENST00000429746 PLET1Q6UQ28 207 aa13.15□□□□□ -0.3
CTSD-203ENST00000429746 S100ZQ8WXG8 99 aa13.15□□□□□ -0.3
CTSD-203ENST00000429746 PDCD10Q9BUL8 212 aa13.15□□□□□ -0.3
CTSD-203ENST00000429746 PEMTQ9UBM1 199 aa13.15□□□□□ -0.3
CTSD-203ENST00000429746 MPTX1A8MV57 137 aa13.14□□□□□ -0.31
CTSD-203ENST00000429746 SLC25A6P12236 298 aa13.14□□□□□ -0.31
CTSD-203ENST00000429746 CBLN1P23435 193 aa13.14□□□□□ -0.31
CTSD-203ENST00000429746 DEFB114Q30KQ6 69 aa13.14□□□□□ -0.31
CTSD-203ENST00000429746 C2orf83Q53S99 150 aa13.14□□□□□ -0.31
CTSD-203ENST00000429746 SPSB3Q6PJ21 355 aa13.14□□□□□ -0.31
CTSD-203ENST00000429746 LYG2Q86SG7 212 aa13.14□□□□□ -0.31
CTSD-203ENST00000429746 TXN2Q99757 166 aa13.14□□□□□ -0.31
CTSD-203ENST00000429746 C20orf85Q9H1P6 137 aa13.14□□□□□ -0.31
CTSD-203ENST00000429746 RBKSQ9H477 322 aa13.14□□□□□ -0.31
CTSD-203ENST00000429746 MLXQ9UH92 298 aa13.14□□□□□ -0.31
CTSD-203ENST00000429746 ZNF785A8K8V0 405 aa13.13□□□□□ -0.31
CTSD-203ENST00000429746 CENPXA8MT69 81 aa13.13□□□□□ -0.31
CTSD-203ENST00000429746 ADAP1O75689 374 aa13.13□□□□□ -0.31
CTSD-203ENST00000429746 TCRBP04435 133 aa13.13□□□□□ -0.31
CTSD-203ENST00000429746 SNCAP37840 140 aa13.13□□□□□ -0.31
CTSD-203ENST00000429746 MFAP4P55083 255 aa13.13□□□□□ -0.31
CTSD-203ENST00000429746 ASAH1Q13510 395 aa13.13□□□□□ -0.31
CTSD-203ENST00000429746 CD300EQ496F6 205 aaPredicted RBP13.13□□□□□ -0.31
CTSD-203ENST00000429746 GGNBP1Q5YKI7 109 aa13.13□□□□□ -0.31
CTSD-203ENST00000429746 OR52B4Q8NGK2 314 aa13.13□□□□□ -0.31
CTSD-203ENST00000429746 PINX1Q96BK5 328 aaKnown RBP13.13□□□□□ -0.31
CTSD-203ENST00000429746 TMED3Q9Y3Q3 217 aa13.13□□□□□ -0.31
CTSD-203ENST00000429746 STAB2Q8WWQ8 2551 aa13.12□□□□□ -0.31
CTSD-203ENST00000429746 NDUFA4O00483 81 aa13.12□□□□□ -0.31
CTSD-203ENST00000429746 HTR2BP41595 481 aa13.12□□□□□ -0.31
CTSD-203ENST00000429746 ELLP55199 621 aaPredicted RBP13.12□□□□□ -0.31
CTSD-203ENST00000429746 FAM106AQ4KMX7 169 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms