RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 SSR3Q9UNL2 185 aa13.3□□□□□ -0.28
UPK3BP1-201ENST00000428678 A0A0A6YYH2 397 aa13.29□□□□□ -0.28
UPK3BP1-201ENST00000428678 A6NJ64 397 aa13.29□□□□□ -0.28
UPK3BP1-201ENST00000428678 APOHP02749 345 aaPredicted RBP13.29□□□□□ -0.28
UPK3BP1-201ENST00000428678 CLEC2LP0C7M8 214 aa13.29□□□□□ -0.28
UPK3BP1-201ENST00000428678 MED14OSP0DP75 135 aa13.29□□□□□ -0.28
UPK3BP1-201ENST00000428678 IDNKQ5T6J7 187 aa13.29□□□□□ -0.28
UPK3BP1-201ENST00000428678 TOMM20LQ6UXN7 152 aa13.29□□□□□ -0.28
UPK3BP1-201ENST00000428678 CADM3Q8N126 398 aa13.29□□□□□ -0.28
UPK3BP1-201ENST00000428678 LILRB2Q8N423 598 aa13.29□□□□□ -0.28
UPK3BP1-201ENST00000428678 PINX1Q96BK5 328 aaKnown RBP13.29□□□□□ -0.28
UPK3BP1-201ENST00000428678 TSC22D3Q99576 134 aa13.29□□□□□ -0.28
UPK3BP1-201ENST00000428678 ZNF2Q9BSG1 426 aaPredicted RBP13.29□□□□□ -0.28
UPK3BP1-201ENST00000428678 DIABLOQ9NR28 239 aa13.29□□□□□ -0.28
UPK3BP1-201ENST00000428678 RABAC1Q9UI14 185 aa13.29□□□□□ -0.28
UPK3BP1-201ENST00000428678 A0A1B0GVY2 172 aa13.28□□□□□ -0.28
UPK3BP1-201ENST00000428678 MIFP14174 115 aa13.28□□□□□ -0.28
UPK3BP1-201ENST00000428678 SCAND1P57086 179 aa13.28□□□□□ -0.28
UPK3BP1-201ENST00000428678 UBE2UQ5VVX9 321 aa13.28□□□□□ -0.28
UPK3BP1-201ENST00000428678 CMTM1Q8IZ96 169 aa13.28□□□□□ -0.28
UPK3BP1-201ENST00000428678 DUSP18Q8NEJ0 188 aa13.28□□□□□ -0.28
UPK3BP1-201ENST00000428678 MOB3AQ96BX8 217 aa13.28□□□□□ -0.28
UPK3BP1-201ENST00000428678 VSIRQ9H7M9 311 aa13.28□□□□□ -0.28
UPK3BP1-201ENST00000428678 TRAV2A0A0B4J234 112 aa13.27□□□□□ -0.29
UPK3BP1-201ENST00000428678 GIG44P09565 113 aaPredicted RBP13.27□□□□□ -0.29
UPK3BP1-201ENST00000428678 RFX2P48378 723 aa13.27□□□□□ -0.29
UPK3BP1-201ENST00000428678 PMP2P02689 132 aa13.26□□□□□ -0.29
UPK3BP1-201ENST00000428678 TMEM41BQ5BJD5 291 aa13.26□□□□□ -0.29
UPK3BP1-201ENST00000428678 PVRIGQ6DKI7 326 aa13.26□□□□□ -0.29
UPK3BP1-201ENST00000428678 DHRS11Q6UWP2 260 aa13.26□□□□□ -0.29
UPK3BP1-201ENST00000428678 IZUMO2Q6UXV1 221 aa13.26□□□□□ -0.29
UPK3BP1-201ENST00000428678 TRPT1Q86TN4 253 aaKnown RBP13.26□□□□□ -0.29
UPK3BP1-201ENST00000428678 ABCA13Q86UQ4 5058 aa13.26□□□□□ -0.29
UPK3BP1-201ENST00000428678 RNF126Q9BV68 326 aa13.26□□□□□ -0.29
UPK3BP1-201ENST00000428678 TMEM231Q9H6L2 316 aa13.26□□□□□ -0.29
UPK3BP1-201ENST00000428678 PUS1Q9Y606 427 aaKnown RBP eCLIP13.26□□□□□ -0.29
UPK3BP1-201ENST00000428678 ELOA3CA0A087WX78 387 aaPredicted RBP13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 PRSS29PA6NIE9 313 aa13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 GPR31O00270 319 aa13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 SPP1P10451 314 aa13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 C4BPBP20851 252 aa13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 NPBWR1P48145 328 aa13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 HSPA13P48723 471 aa13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 GABARAPL2P60520 117 aa13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 PHLDA2Q53GA4 152 aa13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 MORN3Q6PF18 240 aaPredicted RBP13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 ZNF600Q6ZNG1 722 aa13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 ZNF114Q8NC26 417 aa13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 STXBP6Q8NFX7 210 aa13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 OR4A16Q8NH70 328 aa13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 FXYD6Q9H0Q3 95 aa13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 VCX3BQ9H321 246 aa13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 RNF167Q9H6Y7 350 aa13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 ZFAND3Q9H8U3 227 aa13.25□□□□□ -0.29
UPK3BP1-201ENST00000428678 KNCNA6PVL3 124 aa13.24□□□□□ -0.29
UPK3BP1-201ENST00000428678 ZNF705EA8MWA4 302 aaPredicted RBP13.24□□□□□ -0.29
UPK3BP1-201ENST00000428678 PRCDQ00LT1 54 aa13.24□□□□□ -0.29
UPK3BP1-201ENST00000428678 H2BFWTQ7Z2G1 175 aa13.24□□□□□ -0.29
UPK3BP1-201ENST00000428678 OR5H2Q8NGV7 314 aa13.24□□□□□ -0.29
UPK3BP1-201ENST00000428678 CLEC5AQ9NY25 188 aa13.24□□□□□ -0.29
UPK3BP1-201ENST00000428678 X6R8D5 127 aa13.24□□□□□ -0.29
UPK3BP1-201ENST00000428678 DNAH11Q96DT5 4516 aa13.23□□□□□ -0.29
UPK3BP1-201ENST00000428678 LOC100506127A0A0U1RQW1 187 aa13.23□□□□□ -0.29
UPK3BP1-201ENST00000428678 M0R2N4 97 aa13.23□□□□□ -0.29
UPK3BP1-201ENST00000428678 ZNF688P0C7X2 276 aa13.23□□□□□ -0.29
UPK3BP1-201ENST00000428678 ERHP84090 104 aaKnown RBP13.23□□□□□ -0.29
UPK3BP1-201ENST00000428678 ZNF767PQ75MW2 155 aa13.23□□□□□ -0.29
UPK3BP1-201ENST00000428678 SPARTQ8N0X7 666 aa13.23□□□□□ -0.29
UPK3BP1-201ENST00000428678 FCGR1BQ92637 280 aa13.23□□□□□ -0.29
UPK3BP1-201ENST00000428678 TBC1D24Q9ULP9 559 aa13.23□□□□□ -0.29
UPK3BP1-201ENST00000428678 CELA1Q9UNI1 258 aa13.23□□□□□ -0.29
UPK3BP1-201ENST00000428678 PKD1P98161 4303 aa13.22□□□□□ -0.29
UPK3BP1-201ENST00000428678 DYNC1H1Q14204 4646 aaKnown RBP13.22□□□□□ -0.29
UPK3BP1-201ENST00000428678 DEFB131BA0A096LNP1 70 aa13.22□□□□□ -0.29
UPK3BP1-201ENST00000428678 K7EQG2 157 aa13.22□□□□□ -0.29
UPK3BP1-201ENST00000428678 RTL8CO15255 209 aa13.22□□□□□ -0.29
UPK3BP1-201ENST00000428678 AMBPP02760 352 aa13.22□□□□□ -0.29
UPK3BP1-201ENST00000428678 P0DMU3 169 aa13.22□□□□□ -0.29
UPK3BP1-201ENST00000428678 FAM231AP0DMU4 169 aa13.22□□□□□ -0.29
UPK3BP1-201ENST00000428678 FAM231CP0DMU5 169 aa13.22□□□□□ -0.29
UPK3BP1-201ENST00000428678 S100GP29377 79 aa13.22□□□□□ -0.29
UPK3BP1-201ENST00000428678 TAS2R46P59540 309 aa13.22□□□□□ -0.29
UPK3BP1-201ENST00000428678 SPINK9Q5DT21 86 aa13.22□□□□□ -0.29
UPK3BP1-201ENST00000428678 ACTL10Q5JWF8 245 aa13.22□□□□□ -0.29
UPK3BP1-201ENST00000428678 POM121L12Q8N7R1 296 aa13.22□□□□□ -0.29
UPK3BP1-201ENST00000428678 OR6F1Q8NGZ6 308 aa13.22□□□□□ -0.29
UPK3BP1-201ENST00000428678 SEC22AQ96IW7 307 aa13.22□□□□□ -0.29
UPK3BP1-201ENST00000428678 A0A1B0GU03 582 aa13.21□□□□□ -0.29
UPK3BP1-201ENST00000428678 A0A1W2PS18 150 aa13.21□□□□□ -0.29
UPK3BP1-201ENST00000428678 NPPCP23582 126 aa13.21□□□□□ -0.29
UPK3BP1-201ENST00000428678 HSPE1P61604 102 aaKnown RBP13.21□□□□□ -0.29
UPK3BP1-201ENST00000428678 GRAMD2BQ96HH9 432 aa13.21□□□□□ -0.29
UPK3BP1-201ENST00000428678 TMEM50AO95807 157 aa13.2□□□□□ -0.3
UPK3BP1-201ENST00000428678 SNCAP37840 140 aa13.2□□□□□ -0.3
UPK3BP1-201ENST00000428678 C12orf74Q32Q52 190 aa13.2□□□□□ -0.3
UPK3BP1-201ENST00000428678 TBC1D26Q86UD7 250 aa13.2□□□□□ -0.3
UPK3BP1-201ENST00000428678 MRGPRFQ96AM1 343 aa13.2□□□□□ -0.3
UPK3BP1-201ENST00000428678 S100A16Q96FQ6 103 aaKnown RBP13.2□□□□□ -0.3
UPK3BP1-201ENST00000428678 METTL26Q96S19 204 aa13.2□□□□□ -0.3
UPK3BP1-201ENST00000428678 NDUFAF3Q9BU61 184 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms