RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 ZXDAP98168 799 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 RUNX3Q13761 415 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 HES1Q14469 280 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 ODF1Q14990 250 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 EFNB3Q15768 340 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 ABHD17BQ5VST6 288 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 FAM27BQ5VT28 67 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 SYT8Q8NBV8 401 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 NUP35Q8NFH5 326 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 OR1L4Q8NGR5 311 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 OR10J6PQ8NGY7 276 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 OR13C6PQ8NH95 151 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 PRSS3P2Q8NHM4 247 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 FLVCR1-AS1Q8TAF5 88 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 PTH2Q96A98 100 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 RAB37Q96AX2 223 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 COQ2Q96H96 371 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 IGF2BP2-AS1Q96M15 143 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 SPAG8Q99932 426 aaPredicted RBP4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 TM2D2Q9BX73 214 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 CHRNA10Q9GZZ6 450 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 TMEM133Q9H2Q1 129 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 AKIRIN1Q9H9L7 192 aaPredicted RBP4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 HEYLQ9NQ87 328 aaPredicted RBP4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 HRASLS2Q9NWW9 162 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 OCIAD1Q9NX40 245 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 TMEM131Q92545 1883 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 ATG2AQ2TAZ0 1938 aa4.64□□□□□ -1.67
VTI1BP4-201ENST00000427516 hCG_38984A0A1B0GV85 526 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 PMS2P5A8MQ11 134 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 HIGD1CA8MV81 97 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 B5MCH6 92 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 ATP5LO75964 103 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 P01737 135 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 HBDP02042 147 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 IGKV3-11P04433 115 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 IL4P05112 153 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 ATP5G1P05496 136 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 SCTP09683 121 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 FGF6P10767 208 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 EGR1P18146 543 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 FCGR2BP31994 310 aaPredicted RBP4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 MPV17P39210 176 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 YPEL5P62699 121 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 ATP5G2Q06055 141 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 FXYD3Q14802 87 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 PSG5Q15238 335 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 OR1C1Q15619 314 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 TWIST1Q15672 202 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 CST6Q15828 149 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 ADIPOQQ15848 244 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 ETDBQ3ZM63 59 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 FAM120AOSQ5T036 256 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 CRIP3Q6Q6R5 217 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 SLC25A48Q6ZT89 311 aaKnown RBP4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 PPP1R27Q86WC6 154 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 TUSC5Q8IXB3 177 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 ZDHHC23Q8IYP9 409 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 SPEM1Q8N4L4 309 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 SMIM20Q8N5G0 67 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 FADS6Q8N9I5 356 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 RNF183Q96D59 192 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 MMABQ96EY8 250 aaPredicted RBP4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 FMC1Q96HJ9 113 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 ZNF414Q96IQ9 312 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 KRTAP4-12Q9BQ66 201 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 ZNF747Q9BV97 191 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 RTL8AQ9BWD3 113 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 SSBP3Q9BWW4 388 aaPredicted RBP4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 RNF208Q9H0X6 261 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 RNASE7Q9H1E1 156 aaKnown RBP4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 IFI27L2Q9H2X8 130 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 POLDIP2Q9Y2S7 368 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 LINC00312Q9Y6C7 94 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 THADAQ6YHU6 1953 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 NUMA1Q14980 2115 aa4.63□□□□□ -1.67
VTI1BP4-201ENST00000427516 EML5Q05BV3 1969 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 IGLV3-32A0A0A0MS00 114 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 NCBP2LA6PVI3 153 aaKnown RBP4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 RHODO00212 210 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 SPINK4O60575 86 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 IGKV1-39P01597 117 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 CLPSP04118 112 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 IGKV1D-39P04432 117 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 CISD3P0C7P0 127 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 ZNF688P0C7X2 276 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 P0C879 139 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 C8orf88P0DMB2 117 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 CYBAP13498 195 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 CRYGSP22914 178 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 ARL4DP49703 201 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 CAMPP49913 170 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 SUB1P53999 127 aaKnown RBP eCLIP4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 SLC35E4Q6ICL7 350 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 SLC23A3Q6PIS1 610 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 Q6ZRM9 215 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 YRDCQ86U90 279 aaKnown RBP4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 TEN1Q86WV5 123 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 CEND1Q8N111 149 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms