RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 RPL29P47914 159 aaKnown RBP12.08□□□□□ -0.48
ACTB-204ENST00000425660 CCL20P78556 96 aa12.08□□□□□ -0.48
ACTB-204ENST00000425660 RAB31Q13636 194 aa12.08□□□□□ -0.48
ACTB-204ENST00000425660 SLC16A13Q7RTY0 426 aa12.08□□□□□ -0.48
ACTB-204ENST00000425660 FNDC4Q9H6D8 234 aaPredicted RBP12.08□□□□□ -0.48
ACTB-204ENST00000425660 C1RLQ9NZP8 487 aa12.08□□□□□ -0.48
ACTB-204ENST00000425660 F11RQ9Y624 299 aaKnown RBP12.08□□□□□ -0.48
ACTB-204ENST00000425660 CORTO00230 105 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 REG1AP05451 166 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 MFAP2P55001 183 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 RUSC1-AS1Q66K80 236 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 SSX7Q7RTT5 188 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 Q8N9W7 124 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 OR10G4Q8NGN3 311 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 OR10G9Q8NGN4 311 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 OR10G7Q8NGN6 311 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 MEGF9Q9H1U4 602 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 FAM96BQ9Y3D0 163 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 NCBP2LA6PVI3 153 aaKnown RBP12.07□□□□□ -0.48
ACTB-204ENST00000425660 SEC14L6B5MCN3 397 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 CNIH1O95406 144 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 CRYGCP07315 174 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 IGHV4-38-2P0DP08 117 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 PRR20EP86478 221 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 PRR20CP86479 221 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 PRR20DP86480 221 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 PRR20BP86481 221 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 PRR20AP86496 221 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 PMS2P11Q13670 270 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 FXYD3Q14802 87 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 MLANAQ16655 118 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 GUK1Q16774 197 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 ACOT6Q3I5F7 207 aaPredicted RBP12.07□□□□□ -0.48
ACTB-204ENST00000425660 Q5PR19 223 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 FAM120AOSQ5T036 256 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 SSMEM1Q8WWF3 244 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 PBDC1Q9BVG4 233 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 SMDT1Q9H4I9 107 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 PXMP4Q9Y6I8 212 aa12.07□□□□□ -0.48
ACTB-204ENST00000425660 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.06□□□□□ -0.481e-13■■■□□ 14.7
ACTB-204ENST00000425660 CTXND1A0A1B0GTU2 59 aa12.06□□□□□ -0.48
ACTB-204ENST00000425660 J3QLI3 93 aa12.06□□□□□ -0.48
ACTB-204ENST00000425660 YIF1AO95070 293 aa12.06□□□□□ -0.48
ACTB-204ENST00000425660 CTRB1P17538 263 aa12.06□□□□□ -0.48
ACTB-204ENST00000425660 CX3CL1P78423 397 aa12.06□□□□□ -0.48
ACTB-204ENST00000425660 C10orf91Q5T1B1 145 aa12.06□□□□□ -0.48
ACTB-204ENST00000425660 CTRB2Q6GPI1 263 aa12.06□□□□□ -0.48
ACTB-204ENST00000425660 KRTAP1-3Q8IUG1 177 aa12.06□□□□□ -0.48
ACTB-204ENST00000425660 NARS2Q96I59 477 aaKnown RBP12.06□□□□□ -0.48
ACTB-204ENST00000425660 TMEM231Q9H6L2 316 aa12.06□□□□□ -0.48
ACTB-204ENST00000425660 C9JQL5 133 aa12.05□□□□□ -0.48
ACTB-204ENST00000425660 AVPP01185 164 aa12.05□□□□□ -0.48
ACTB-204ENST00000425660 HLA-DRB1P01911 266 aa12.05□□□□□ -0.48
ACTB-204ENST00000425660 ADCYAP1P18509 176 aa12.05□□□□□ -0.48
ACTB-204ENST00000425660 B2MP61769 119 aa12.05□□□□□ -0.48
ACTB-204ENST00000425660 KLF17Q5JT82 389 aaPredicted RBP12.05□□□□□ -0.48
ACTB-204ENST00000425660 MIC13Q5XKP0 118 aa12.05□□□□□ -0.48
ACTB-204ENST00000425660 ETFRF1Q6IPR1 90 aa12.05□□□□□ -0.48
ACTB-204ENST00000425660 BRD3OSQ6XYD6 125 aa12.05□□□□□ -0.48
ACTB-204ENST00000425660 STPG3Q8N7X2 389 aa12.05□□□□□ -0.48
ACTB-204ENST00000425660 SLC35E1Q96K37 410 aa12.05□□□□□ -0.48
ACTB-204ENST00000425660 ACTR3CQ9C0K3 210 aaPredicted RBP12.05□□□□□ -0.48
ACTB-204ENST00000425660 TREM1Q9NP99 234 aa12.05□□□□□ -0.48
ACTB-204ENST00000425660 SLC45A2Q9UMX9 530 aa12.05□□□□□ -0.48
ACTB-204ENST00000425660 DMRT1Q9Y5R6 373 aa12.05□□□□□ -0.48
ACTB-204ENST00000425660 A0A0U1RQK1 487 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 A0A1B0GV50 99 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 MAP1LC3B2A6NCE7 125 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 RNF223E7ERA6 249 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 CYB5BO43169 146 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 APELAP0DMC3 54 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 PEA15Q15121 130 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 LCN15Q6UWW0 184 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 CCDC28AQ8IWP9 274 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 OR2T6Q8NHC8 308 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 PIFOQ8TCI5 191 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 ARPC1AQ92747 370 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 MAP1LC3BQ9GZQ8 125 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 SLC39A9Q9NUM3 307 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 IGHV3OR16-10A0A075B7F0 116 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 RBFOX3A6NFN3 312 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 LINC00869P0C866 280 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 NDPQ00604 133 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 TMEM249Q2WGJ8 235 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 GCSAMLQ5JQS6 135 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 THAP8Q8NA92 274 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 TMEM116Q8NCL8 245 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 OR1L6Q8NGR2 347 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 RAB24Q969Q5 203 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 SEC11CQ9BY50 192 aa12.04□□□□□ -0.48
ACTB-204ENST00000425660 EIF5A2Q9GZV4 153 aaKnown RBP12.04□□□□□ -0.48
ACTB-204ENST00000425660 ZFHX3Q15911 3703 aa12.03□□□□□ -0.48
ACTB-204ENST00000425660 IGHV7-81A0A0B4J1V7 117 aa12.03□□□□□ -0.48
ACTB-204ENST00000425660 NPIPB5A8MRT5 1133 aa12.03□□□□□ -0.48
ACTB-204ENST00000425660 TSPAN9O75954 239 aa12.03□□□□□ -0.48
ACTB-204ENST00000425660 C19orf35Q6ZS72 473 aa12.03□□□□□ -0.48
ACTB-204ENST00000425660 WNT10AQ9GZT5 417 aa12.03□□□□□ -0.48
ACTB-204ENST00000425660 SLC25A22Q9H936 323 aa12.03□□□□□ -0.48
ACTB-204ENST00000425660 CARHSP1Q9Y2V2 147 aaKnown RBP12.03□□□□□ -0.48
ACTB-204ENST00000425660 SFTA3P0C7M3 94 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms