RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 RHPN1-AS1Q9BWJ2 59 aa13.11□□□□□ -0.31
GPC1-203ENST00000425056 NXF2Q9GZY0 626 aaKnown RBP13.11□□□□□ -0.31
GPC1-203ENST00000425056 RBM38Q9H0Z9 239 aaKnown RBP13.11□□□□□ -0.31
GPC1-203ENST00000425056 BATF3Q9NR55 127 aa13.11□□□□□ -0.31
GPC1-203ENST00000425056 MT-CO2P00403 227 aa13.1□□□□□ -0.31
GPC1-203ENST00000425056 ELK1P19419 428 aa13.1□□□□□ -0.31
GPC1-203ENST00000425056 HSPE1P61604 102 aaKnown RBP13.1□□□□□ -0.31
GPC1-203ENST00000425056 TMEM116Q8NCL8 245 aa13.1□□□□□ -0.31
GPC1-203ENST00000425056 MAP6D1Q9H9H5 199 aa13.1□□□□□ -0.31
GPC1-203ENST00000425056 RSL24D1Q9UHA3 163 aaKnown RBP13.1□□□□□ -0.31
GPC1-203ENST00000425056 RPL35AP18077 110 aaKnown RBP13.09□□□□□ -0.31
GPC1-203ENST00000425056 RND3P61587 244 aa13.09□□□□□ -0.31
GPC1-203ENST00000425056 H3BMQ9 156 aa13.08□□□□□ -0.32
GPC1-203ENST00000425056 M0QYG6 137 aa13.08□□□□□ -0.32
GPC1-203ENST00000425056 GNG7O60262 68 aa13.08□□□□□ -0.32
GPC1-203ENST00000425056 HPGDSO60760 199 aa13.08□□□□□ -0.32
GPC1-203ENST00000425056 YIF1AO95070 293 aa13.08□□□□□ -0.32
GPC1-203ENST00000425056 FAM90A2PQ658T7 463 aa13.08□□□□□ -0.32
GPC1-203ENST00000425056 CEMP1Q6PRD7 247 aaPredicted RBP13.08□□□□□ -0.32
GPC1-203ENST00000425056 LHFPL1Q86WI0 220 aa13.08□□□□□ -0.32
GPC1-203ENST00000425056 APRG1Q8IVJ8 170 aa13.08□□□□□ -0.32
GPC1-203ENST00000425056 ZNF486Q96H40 463 aaPredicted RBP13.08□□□□□ -0.32
GPC1-203ENST00000425056 C6orf62Q9GZU0 229 aaPredicted RBP13.08□□□□□ -0.32
GPC1-203ENST00000425056 IGHV3-49A0A0A0MS15 119 aa13.07□□□□□ -0.32
GPC1-203ENST00000425056 TRAV14DV4A0A0A6YYC5 116 aa13.07□□□□□ -0.32
GPC1-203ENST00000425056 IGHV3-48P01763 117 aa13.07□□□□□ -0.32
GPC1-203ENST00000425056 P0C879 139 aa13.07□□□□□ -0.32
GPC1-203ENST00000425056 CMC4P56277 68 aaPredicted RBP13.07□□□□□ -0.32
GPC1-203ENST00000425056 ERHP84090 104 aaKnown RBP13.07□□□□□ -0.32
GPC1-203ENST00000425056 PINX1Q96BK5 328 aaKnown RBP13.07□□□□□ -0.32
GPC1-203ENST00000425056 INS-IGF2F8WCM5 200 aa13.06□□□□□ -0.32
GPC1-203ENST00000425056 IGKV1-5P01602 117 aa13.06□□□□□ -0.32
GPC1-203ENST00000425056 ZNF124Q15973 351 aa13.06□□□□□ -0.32
GPC1-203ENST00000425056 IZUMO4Q1ZYL8 232 aa13.06□□□□□ -0.32
GPC1-203ENST00000425056 RNASE10Q5GAN6 216 aaKnown RBP13.06□□□□□ -0.32
GPC1-203ENST00000425056 ARRDC1Q8N5I2 433 aa13.06□□□□□ -0.32
GPC1-203ENST00000425056 TMEM217Q8N7C4 229 aa13.06□□□□□ -0.32
GPC1-203ENST00000425056 TP53RKQ96S44 253 aa13.06□□□□□ -0.32
GPC1-203ENST00000425056 GINS3Q9BRX5 216 aa13.06□□□□□ -0.32
GPC1-203ENST00000425056 A6NHS1 94 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 LY6G6CO95867 125 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 CD5P06127 495 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 PGAM2P15259 253 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 PI3P19957 117 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 NPBWR1P48145 328 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 TFPI2P48307 235 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 RORCP51449 518 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 PIGPP57054 158 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 SPCS2Q15005 226 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 SPINK9Q5DT21 86 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 PVRIGQ6DKI7 326 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 TOMM20LQ6UXN7 152 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 SLC35G3Q8N808 338 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 CSTL1Q9H114 145 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 VSIRQ9H7M9 311 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 ZFAND3Q9H8U3 227 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 KLK11Q9UBX7 282 aa13.05□□□□□ -0.32
GPC1-203ENST00000425056 IGKV3-7A0A075B6H7 116 aa13.04□□□□□ -0.32
GPC1-203ENST00000425056 IGHV3OR16-13A0A075B7E8 117 aa13.04□□□□□ -0.32
GPC1-203ENST00000425056 IGHV3-74A0A0B4J1X5 117 aa13.04□□□□□ -0.32
GPC1-203ENST00000425056 A0A0B4J293 547 aa13.04□□□□□ -0.32
GPC1-203ENST00000425056 TBPP20226 339 aa13.04□□□□□ -0.32
GPC1-203ENST00000425056 AKR1C2P52895 323 aa13.04□□□□□ -0.32
GPC1-203ENST00000425056 RNASE12Q5GAN4 147 aaKnown RBP13.04□□□□□ -0.32
GPC1-203ENST00000425056 MZT2AQ6P582 158 aa13.04□□□□□ -0.32
GPC1-203ENST00000425056 ZNF600Q6ZNG1 722 aa13.04□□□□□ -0.32
GPC1-203ENST00000425056 TCF24Q7RTU0 167 aa13.04□□□□□ -0.32
GPC1-203ENST00000425056 DUSP18Q8NEJ0 188 aa13.04□□□□□ -0.32
GPC1-203ENST00000425056 GATAD1Q8WUU5 269 aa13.04□□□□□ -0.32
GPC1-203ENST00000425056 ST8SIA2Q92186 375 aa13.04□□□□□ -0.32
GPC1-203ENST00000425056 KLK5Q9Y337 293 aaPredicted RBP13.04□□□□□ -0.32
GPC1-203ENST00000425056 MPTX1A8MV57 137 aa13.03□□□□□ -0.32
GPC1-203ENST00000425056 FAM25AB3EWG3 89 aa13.03□□□□□ -0.32
GPC1-203ENST00000425056 FAM25CB3EWG5 89 aa13.03□□□□□ -0.32
GPC1-203ENST00000425056 FAM25GB3EWG6 89 aa13.03□□□□□ -0.32
GPC1-203ENST00000425056 ST8SIA3O43173 380 aa13.03□□□□□ -0.32
GPC1-203ENST00000425056 CD3DP04234 171 aa13.03□□□□□ -0.32
GPC1-203ENST00000425056 SNCAP37840 140 aa13.03□□□□□ -0.32
GPC1-203ENST00000425056 PAFAH1B2P68402 229 aa13.03□□□□□ -0.32
GPC1-203ENST00000425056 GBGT1Q8N5D6 347 aa13.03□□□□□ -0.32
GPC1-203ENST00000425056 OR52I2Q8NH67 350 aa13.03□□□□□ -0.32
GPC1-203ENST00000425056 DYNC2LI1Q8TCX1 351 aa13.03□□□□□ -0.32
GPC1-203ENST00000425056 AP3S1Q92572 193 aa13.03□□□□□ -0.32
GPC1-203ENST00000425056 CCDC59Q9P031 241 aaKnown RBP13.03□□□□□ -0.32
GPC1-203ENST00000425056 MTFP1Q9UDX5 166 aa13.03□□□□□ -0.32
GPC1-203ENST00000425056 PUS1Q9Y606 427 aaKnown RBP eCLIP13.03□□□□□ -0.32
GPC1-203ENST00000425056 TRAV2A0A0B4J234 112 aa13.02□□□□□ -0.33
GPC1-203ENST00000425056 C3orf85A0A1B0GTC6 90 aa13.02□□□□□ -0.33
GPC1-203ENST00000425056 CORTO00230 105 aa13.02□□□□□ -0.33
GPC1-203ENST00000425056 ATG12O94817 140 aa13.02□□□□□ -0.33
GPC1-203ENST00000425056 IFNA17P01571 189 aa13.02□□□□□ -0.33
GPC1-203ENST00000425056 RNASE2P10153 161 aaKnown RBP13.02□□□□□ -0.33
GPC1-203ENST00000425056 ZNF182P17025 639 aaPredicted RBP13.02□□□□□ -0.33
GPC1-203ENST00000425056 PPP5CP53041 499 aa13.02□□□□□ -0.33
GPC1-203ENST00000425056 C11orf68Q9H3H3 251 aaKnown RBP13.02□□□□□ -0.33
GPC1-203ENST00000425056 A0A1B0GU03 582 aa13.01□□□□□ -0.33
GPC1-203ENST00000425056 DFFBO76075 338 aa13.01□□□□□ -0.33
GPC1-203ENST00000425056 APOHP02749 345 aaPredicted RBP13.01□□□□□ -0.33
GPC1-203ENST00000425056 LILRB2Q8N423 598 aa13.01□□□□□ -0.33
GPC1-203ENST00000425056 CCDC71LQ8N9Z2 235 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms